Dqui014418.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila quinaria
Gene Symbol
-
Assembly
GCA_035047525.1
Location
JAWNPO010000455.1:32120039-32125062[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.007 0.56 11.1 1.0 2 23 143 165 142 165 0.90
2 12 5.7e-07 4.5e-05 24.0 2.2 2 23 179 201 178 201 0.97
3 12 0.0013 0.11 13.4 8.6 2 23 496 517 496 517 0.97
4 12 6.1e-06 0.00049 20.8 1.8 2 23 524 546 523 546 0.95
5 12 0.00014 0.011 16.5 0.5 1 23 551 574 551 574 0.97
6 12 7.1e-05 0.0057 17.4 5.5 1 23 592 614 592 614 0.96
7 12 0.00014 0.011 16.5 1.6 1 23 619 641 619 641 0.98
8 12 3.7e-05 0.003 18.3 1.7 1 23 647 669 647 669 0.95
9 12 2.7e-05 0.0021 18.7 0.7 1 23 675 697 675 697 0.98
10 12 3.9e-07 3.1e-05 24.5 2.7 3 23 705 725 704 725 0.99
11 12 6.2e-08 4.9e-06 27.0 1.8 1 23 731 753 731 753 0.99
12 12 1.8 1.4e+02 3.6 5.2 1 19 758 776 758 781 0.88

Sequence Information

Coding Sequence
ATGCCGGATACATTCAGCGAATTCGATGCGGAGCGCGTCTGTCGCGTTTGCCTGCGCGAAGTGGGCGATTTTTACTTCATCTACGATGAGGCGCCCGTGGAGCAGGGCGCGAACATTGCCCAGATACTGAACGAGTGTACGCGCTACACCTGCGAGCGATTCGACAAGATGCCCCATCATATGTGCGATACGTGCATTAAGGCCGCCTGTCAAGCGTATCGCTTTAAGCGAGACGCCGAGAAGGCCTATCGCTCCCTGGTGTCCATCCTGGGACAGACGCCGCCGATGAAGCCAAACAGCAGCGATGTCTGCACACAGACTGAACAGCTACCGATGCTGCCGTGCGGCATTTGCAACGATGAGTTTCTCAACATTGTGGAGCTGCGCTTGCATCGCAATCAGGAGCACAAATATATTGAGGAactcaaatgcaaattgtgcGATGCTAAATTCGAGCAATTTCGACAGTTGCGCAGTCATCTGGTCGAGAAGCACGATCAGCAAACGACATCCACATTGTTGCAACGTCGCGTCGAATGCCGCGAATGCAAACGCGCCTTCAGTCGACGTGATCATCTGCTCCGTCATATGCGTACAGTGCACAAATCGAATAAACAGCGCCGGATGCTGTCCGATGACCAGGAGCAGGAGccggaggtggaggtggagttggagttggaggaggaggaggatacAAGCTGGCCACCTATCGACGAGGCAACCATGCACAGTGGCGATGAACTGGAATCAGCTGCCGTTTTACTCAATGCCAACCAATGTTCCGATGATGAGGAGAACGACAATAGCGAGAGTCTCTATCAAAGCCACACGAATCCCATATCAATCAACGAGGAGGCTTACGACGATGAGGCCGACGCGGAGGCGAAGCAATCCCTTTGGCTGCACATTAAACCGGAGCCCGAAACCGAGCCAGAACCACAACAGTGTCCGGCTCCGATCGAGGCGCAAGTGAAGCGCGAGAAGCGTCGCAGAAAGGCAAAGATGCACACGGACAACGACGGCGACGAGGCGGCGAGGGATCAGAAGGTGGACAGTGCAGAGGGCAAGAAAAGTGCACTGGCAACAGCCGAAGTTAAGGAGGAGCCACTGGCAGAGCCCCAAGTGCCCATTAAACAGGAGCGACAACGCGTTGATAGCGTTGATGTggatgcggatgtggatgcAGTGGATGAGTTCGAGCTGAAGACCACAAGAGCGGATATGTTGCACAGCTCCgatgaggaggaggacgaTGAAGAAGAATTTGGCAATGCTGACAATGACAGCGATCTGGATTACGTGGACGATGACGATGGCGAGGATGAAGCAGAAGGACCGAATGTAACCAAGGATAAGGCGAAGCTGCCAAAAGCAGCACAAGTGAAAATCGTGCGGGAATATTTACAGAAACCGTCGACGGTTAAacaacgtcgtcgtcgtcgcaaTAAACAGACTGATGCGGATCCAAATGCAAATCCCGAGAATCGTTGTGAAATCTGTCAGCGCACCTTCTCACGACATTGTCATTTGTTGCGCCACCAATTGTCGCATCTGGAGAAGAAGCCGCTCAGCTGTCCGCACTGCTCGAAGGGATTTGCGCGCAGCGATCATTTGAAGGCGCACGTCCAGAGTCTGCATGGCAACAAGGAGCACAAGTGTGTGCTATGCGAAGCGGCCTTCACCCGACCCGATGCCCTCGAGCGGCACAAGCTGACCAAACACAATGGCGAGGGCCTCGATCCAAACAGCGGGCTCAAGCTGCAACTGAATGAGCACACATGCGAATATTGCTCCAAGCGATTCTCCAGCAAGACATATCTGCGCAAGCACACACTCCTTCACACGGAATTCCTTTACGCCTGCAAAAGCTGTGACGAGACGTTCAAGGAGCGCCAACAGCTGCGCAGCCATGAGAAGACGCACACGGGTCAGCGGAACTTCCTCTGTTGCATATGCGGCGACAGTTTTGCCCGCAACGATTATCTGCGCGTCCACATGCGGCGGCACAATGGAGAGAAGCCCTACAAGTGCCGCTACTGTGTCAAGGCATTCCCGCGTGCCACAGATCTCAAGGTGCACGAGCGGTATCACACTGGCACCAAACCGAATCTGTGCAACACGTGCGGCAAGAGTTTCCATCGCGCCTACAATCTGACCATCCACATGCGGACGCACACGGGCGAGCGTCCGTACAAGTGCGACCAGTGCCAGAAGAGCTTCAGCCAGAGCAACGATCTGAAGGCGCACATCCGACGCCACACGGGCGAGCGCTACAAGTGTCCACATTGTGATGCCTACTTCCTGCAACTTTATCACATGCGCAACCATTGCCTCAGCGCTCACAACAAGCATATTGAGACGAAAACGGGCAGACTACAGCGCACTGGACTCCTGGATGAACCGATTCACTCGCATCTCACCACGGTGGTGATGCCGCCAACGCGCTTCCAGCCggacgcaacaacaactgcggcGGCATCTGCAACAATTGCCACACCAACTCAACATTCGCCTGTCACCTACAACACGACATCGCCGGCATCTGTTACTACTGTGCCCATCACCCTGCCTGTCCAGGATGCAGCCGGATTTGTGGGCGCTGCGAAtagtgcaacagcaacgaccACGACAACGGCGCCCTTTGGGGCATTCAACATAACGCCCGTTGTTATGGCCCATCTCATGTACAACCACGGAGGCAACAGTCAACAGAGCAACGCCAGTGGCAGCGACACCGTAAAATAG
Protein Sequence
MPDTFSEFDAERVCRVCLREVGDFYFIYDEAPVEQGANIAQILNECTRYTCERFDKMPHHMCDTCIKAACQAYRFKRDAEKAYRSLVSILGQTPPMKPNSSDVCTQTEQLPMLPCGICNDEFLNIVELRLHRNQEHKYIEELKCKLCDAKFEQFRQLRSHLVEKHDQQTTSTLLQRRVECRECKRAFSRRDHLLRHMRTVHKSNKQRRMLSDDQEQEPEVEVELELEEEEDTSWPPIDEATMHSGDELESAAVLLNANQCSDDEENDNSESLYQSHTNPISINEEAYDDEADAEAKQSLWLHIKPEPETEPEPQQCPAPIEAQVKREKRRRKAKMHTDNDGDEAARDQKVDSAEGKKSALATAEVKEEPLAEPQVPIKQERQRVDSVDVDADVDAVDEFELKTTRADMLHSSDEEEDDEEEFGNADNDSDLDYVDDDDGEDEAEGPNVTKDKAKLPKAAQVKIVREYLQKPSTVKQRRRRRNKQTDADPNANPENRCEICQRTFSRHCHLLRHQLSHLEKKPLSCPHCSKGFARSDHLKAHVQSLHGNKEHKCVLCEAAFTRPDALERHKLTKHNGEGLDPNSGLKLQLNEHTCEYCSKRFSSKTYLRKHTLLHTEFLYACKSCDETFKERQQLRSHEKTHTGQRNFLCCICGDSFARNDYLRVHMRRHNGEKPYKCRYCVKAFPRATDLKVHERYHTGTKPNLCNTCGKSFHRAYNLTIHMRTHTGERPYKCDQCQKSFSQSNDLKAHIRRHTGERYKCPHCDAYFLQLYHMRNHCLSAHNKHIETKTGRLQRTGLLDEPIHSHLTTVVMPPTRFQPDATTTAAASATIATPTQHSPVTYNTTSPASVTTVPITLPVQDAAGFVGAANSATATTTTTAPFGAFNITPVVMAHLMYNHGGNSQQSNASGSDTVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00533986;
90% Identity
iTF_00533986;
80% Identity
-