Basic Information

Insect: Drosophila quinaria
Gene Symbol: -
Assembly: GCA_035047525.1
Location: JAWNPO010000415.1:7801234-7805822[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0018 0.14 13.0 2.0 1 23 205 227 205 227 0.96

2 26 0.11 8.8 7.4 1.3 1 23 233 255 233 255 0.97

3 26 0.066 5.3 8.1 0.7 2 23 287 308 286 308 0.96

4 26 0.0071 0.56 11.1 1.4 1 23 383 406 383 406 0.94

5 26 9.1 7.3e+02 1.3 4.2 2 23 418 441 417 441 0.92

6 26 0.68 55 4.9 1.3 1 20 447 466 447 468 0.93

7 26 0.056 4.5 8.3 0.2 2 23 488 509 487 509 0.97

8 26 0.0012 0.097 13.5 1.1 1 23 585 608 585 608 0.95

9 26 0.0036 0.29 12.0 0.2 1 22 617 638 617 638 0.95

10 26 0.011 0.85 10.6 2.9 1 23 647 670 647 670 0.95

11 26 0.00043 0.034 14.9 0.3 2 23 697 718 696 718 0.97

12 26 6.3e-06 0.0005 20.7 3.5 1 23 726 748 726 748 0.99

13 26 0.48 38 5.4 1.0 1 23 898 921 898 921 0.95

14 26 0.44 35 5.5 1.5 1 21 928 948 928 949 0.93

15 26 0.28 23 6.1 0.5 1 23 958 981 958 981 0.88

16 26 1.7e-05 0.0014 19.3 1.2 1 23 1006 1028 1006 1028 0.97

17 26 0.00015 0.012 16.4 0.9 1 23 1035 1057 1035 1057 0.98

18 26 0.0041 0.32 11.9 0.1 2 20 1084 1102 1083 1104 0.93

19 26 0.043 3.5 8.6 4.0 1 23 1149 1172 1149 1172 0.96

20 26 0.014 1.1 10.2 0.5 1 23 1209 1232 1209 1232 0.96

21 26 0.0011 0.084 13.7 3.5 1 23 1254 1277 1254 1277 0.97

22 26 1.5e-05 0.0012 19.5 0.1 2 23 1305 1326 1304 1326 0.95

23 26 0.00025 0.02 15.7 3.1 1 23 1332 1354 1332 1354 0.99

24 26 2.5e-06 0.0002 22.0 2.0 1 23 1360 1382 1360 1382 0.97

25 26 6.4e-08 5.1e-06 27.0 2.4 1 23 1388 1410 1388 1410 0.99

26 26 0.0011 0.087 13.7 0.2 1 21 1416 1436 1416 1440 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0018	0.14	13.0	2.0	1	23	205	227	205	227	0.96
2	26	0.11	8.8	7.4	1.3	1	23	233	255	233	255	0.97
3	26	0.066	5.3	8.1	0.7	2	23	287	308	286	308	0.96
4	26	0.0071	0.56	11.1	1.4	1	23	383	406	383	406	0.94
5	26	9.1	7.3e+02	1.3	4.2	2	23	418	441	417	441	0.92
6	26	0.68	55	4.9	1.3	1	20	447	466	447	468	0.93
7	26	0.056	4.5	8.3	0.2	2	23	488	509	487	509	0.97
8	26	0.0012	0.097	13.5	1.1	1	23	585	608	585	608	0.95
9	26	0.0036	0.29	12.0	0.2	1	22	617	638	617	638	0.95
10	26	0.011	0.85	10.6	2.9	1	23	647	670	647	670	0.95
11	26	0.00043	0.034	14.9	0.3	2	23	697	718	696	718	0.97
12	26	6.3e-06	0.0005	20.7	3.5	1	23	726	748	726	748	0.99
13	26	0.48	38	5.4	1.0	1	23	898	921	898	921	0.95
14	26	0.44	35	5.5	1.5	1	21	928	948	928	949	0.93
15	26	0.28	23	6.1	0.5	1	23	958	981	958	981	0.88
16	26	1.7e-05	0.0014	19.3	1.2	1	23	1006	1028	1006	1028	0.97
17	26	0.00015	0.012	16.4	0.9	1	23	1035	1057	1035	1057	0.98
18	26	0.0041	0.32	11.9	0.1	2	20	1084	1102	1083	1104	0.93
19	26	0.043	3.5	8.6	4.0	1	23	1149	1172	1149	1172	0.96
20	26	0.014	1.1	10.2	0.5	1	23	1209	1232	1209	1232	0.96
21	26	0.0011	0.084	13.7	3.5	1	23	1254	1277	1254	1277	0.97
22	26	1.5e-05	0.0012	19.5	0.1	2	23	1305	1326	1304	1326	0.95
23	26	0.00025	0.02	15.7	3.1	1	23	1332	1354	1332	1354	0.99
24	26	2.5e-06	0.0002	22.0	2.0	1	23	1360	1382	1360	1382	0.97
25	26	6.4e-08	5.1e-06	27.0	2.4	1	23	1388	1410	1388	1410	0.99
26	26	0.0011	0.087	13.7	0.2	1	21	1416	1436	1416	1440	0.91

Sequence Information

Coding Sequence: ATGTTTCCGACCGATATTTGTCGCACATGTGCTCTACATGATGCAAACTTATTAGCCCTCTCAACGTGCACCGAGAAATATGCCAACAAAAGTTTCCACGACATGTTGCATGAATTGACACCAAACGATCCCTTAATGGAGCATTCAGACGAGAATCTGCCCCAGTATTTGTGTGGCGACTGCTTGCGTAAGCTGGAAGAGGCCTACGCATTCGTGTTGCAAGCGCGTCAGGTGCAGGAGCAACTGTTGCACAAAATACGCAAGGGACTGCAGTGTCTGGATGAAACACCCATAGACATCGCCCCAGAGCACATAAAGACCGAAACAAACCTTGACGGACACAACGACAAAGTGGCATCTGAGCCTGTTGCAGCCTTAAAGGTGCAACCGGAAAGTGAGACCGAGAGTTGCCCGCGAGATCCGGCTGATGATGATGTGCTGGACCTTAAGCCTTCTCAGCTGAGACGCAGCAATCGGAAGACAAAGCTTGGAACAGACAGCGAACAGGAAAATGAAGCAGACCGTAAAAAGTCCAGCGCCATGCCGCTCAAGCGTCGTCGCGGTCGTCCTGCACGCATGCCCAAAAGGGAGACTATCAACAAGGACGGACGCCACGCGTGCGAGGTGTGCGGCAAGACGTTTTCGTGGCATCGCGACATGCAACGCCACGCCCGCGTCCACTTCGAGCAGGCTGGCTACGTGTGCGACAGCTGTGGCAAGGGATTTCTCCGCAAGGACAAGTATATGTTCCATTTGCGATCGCACGAGAAGCGCCAGGCCAAACGGCAGGCGCTTCAGCTGGGCAACGAGTGGCGCTTTGCGGAACGTCTGTACAGCGCGGGGCGCCTCAAGCGTGTGGAGTGCAAGCTGTGCGGCCTGAAGTGCCAGCGGATTCAGGAACTGCGTGAGCATCTGGCCAGCCATGTTAGCATTGAAACCTTGTCGAATCTCAGCGCCGATAGCGATGTTATCGTGGAACAGTTTAACGGCCAGCAGCTGGACTTGATGCAGATTAAGCAGCAAGTGTGTGCGGACATAGCCCAGGGAAGAGATCACCTGGATAAATTCTGTGTGGTGGTCAACGCACATGGCTATGAGCTTTGTCTGAGCGACTCGGACGAGGAAGTGGCAGGAATGACGCCTCCATACCAATGCCAAGCTTGCAACACACTCTTCTCACGCAAATATCGCCTGATGCGGCACACGCTGGAGGAGCACACTGAACCGACCACGGAGGCAACTCCCTGGCAACGTTGCAACCAGTGCCAAATTGGCTTTGTGTGCGTCAAGCTGCTGGAACAGCATCAGCGCACACAGTGCCACAATCAGATGAAGCGCTATAGTTGTCCCAACTGTCCGGGCAAATTTATTTGGCGGCAGAACCTAAAGCATCATGCGTGTTCCCAACGCATGAGATGTTCAGAGGCTCACGATCAGGAGAGAAGTCAAAGCCGCCAGATTCAGTGCTGCCTTTGCGATGAGCAACTGCCGAGTATGTCGGCACTACGTGCTCATCTAGTAACGCATTGCGATGGACAGAGCGGCATTAATCCTGATCGACGTTCCACCTTCTTTCGGTGTAATTATCCCGATGGTTCCACCTGCAACCAGACGGAGCTCAGCACACAAATTGCGAGGGATTTTGGAGCAGAGGATTATGGTCGCTACTTCAATGCCTGCACAGGCAGCGGTCAGGAGCTGGATTTCTTCGACTCCGATACGGATTTAAGCGACCAGTCAGCCGCAGATGTCCACTCGTGTGATTTGTGCGGCGTGAGCACAAGACGACTTGCCCAACTGCTGAAGCATCAACAGAATCAGCACAGTGAGGTGAATGACCCACTGCCCCACGTGTGCGACAAGTGTGGATTGGGATTTGTGGCTGAGTCGCTGCTTCGCCAGCATCGTCGACGCATTTGTGGGAAGCGGCATGCAAAGTTCCATTGTCAGCATTGCAATCTCGCTTTCATTTGGCAGTCCAACTACGAGCGACACATGGAACTGCAGCACGAGGCGGAGGCCGATGATGTCGCTGATGGGGTGCCCAATACCAGGCTAAGAAGCAAACGCCAACAAGCTGCCAAACTACAGTGCAACGAGTGTGAAAAGGTCTTCATCTGGCCAAAGGATTTGACGCGTCATAAGCGCCTTCATCAGCCGCAGGCATCGGCGCAGTACGAGTGCAGCTACTGTGAGCGCAAGTTCCATCGCAAGGATGGCCTCAAGTCCCACATGCGTGTCCACGGCGAGCAGCACTTGGATGTGGCGGTTCTGCCTAGCGGCGATCCGGATCCGACGGCATTACAGCGAATGCCAATGGTGTTGACGCAACTGTGCCAACCGAATGGATGCAAGCTGATCCAGTGCATGATCTGTCACTCTCGACACACGAAGATCTCTGATCTGCGCATGCATTTGGCGAAGCATCAGTTTGCTGTGGAATTTGCAGAGGAGCGTGCCGAGCCGGAGAACATTGAGAGCATATGCCGGGCTCTATATCCGGAGCAAGTGACTCTGCTGGACAAGCAACAATTAATTGAACGCATCCAGATGGATGTGGGCATGGGCACTGAGCTGGATAGATTCATTTCCATAACCAACGAGGCGGGCATTGAGCTTAGCCTGGACAGCAGCGAAACTGAAACGGATTCGGACTCAACCGAAGTGGAAAGGAGGAGCAGTGGACGGCAATACTACTGTGATCTTTGCCAGCTGAACTGGCCACGCAAACATCAGCTCTATGCCCACCAGCTGGAGCAGCATACATGGGAACAGGCAACCCACGTTTGTGCCCACTGCCAGGCCAGATTCATCAATGACCAGTTGCTGGATCATCATTATCGTAGTCTCTGTCGCAACGTCCACAAGCGTTTCCTCTGTCGAAAGTGTCCCTTAAGGTTTCGCTGGCGCGACAATCTGAAACTGCACTCGGATGTGGCGCATCTGGAAACAACTGGAGAACAGACGAGCTTGGGCATCCAGTTGAATGGGGCAGGTGTCCTTCCTGTTGTCAGCTACGATTGTGCCGACTGCAATCGCAGCTTCAAAATGCAAAAGGATCTCACCAGGCACACACTGATGCATGCCCAGGAATCGAGCATTTATCGGTGTCGTTGGTGTGCCCGTCGCTTCTATCGCCAGGCGAATCTCCTGCAGCACATTGAGCGTCATGGAATAAATGCCGCCCAGCTGCCCTATGCCGAGTCCCTGCTCAATGCCAGCCGTCATCCCCATGGCCCGAAGTGCATCCAATGCAAGGTGTGCGATATTCATTTCTCCACAATTGCCGCACTGCGTTCCCATTTGGCGTCCACACCGAGCGGGACTCATCATGAAATGGGATCGATGCTCAACTACTCGATTACCAATCAGCTGGGCTATGAGCTGCACCTGGAGGACTCGGAAACGGATGAGGAGGCCAAGCCGCCTGGCATTCCCAGCCACTACACCTGCGGCATGTGTCAGCTGCGCTGTGTCCGCAAATTTGAGctgcatcagcatcagcaggcCATGCATCGGTTGGAACGGATCACGGAGGGCTGTGACCAGTGCATCTACAAGAGCGTTTCCCCACATCTCATCGAATATCATCGGCGTGTGCAATGCTGCAACACGGAGAAGCAATTCAAGTGCGTCAAATGCGGCTACAAGTTCATGTGGGAGTCGAATCTGCTGCTGCACATTCAACTGCAGCATCCTAGCACGGATGAGACAGGAGCAGTGCCTGATTCAGAGACACCTGCTGTGGAGTCCCAGATCTTTCAGTGCGGCCAATGCCCGCGTAAATACAATCGCAAGGATCGACTGACTGCCCATGTAAAGAAGTGCCATGCACCTGGCGCAGTTGGTCCAACTGTCTCGCCAACAAAATCATCGACGTCTTCAGCTGTCTCCAAGCAACAGAAAAGTTTTCTGTGCGCCTTTTGTGGCAAGGCGGTGAGCTCCTCCTCCAATCTGATTATACACATACGTCGGCATACCGGCGAGAAGCCCTTCAAGTGCGACTTCTGCGACATGGCCTTCCCCCGCTCCTCCGATCTGCAGTGCCATCgacgcacacacactggcGAACGGCCACATGTCTGCACCGTCTGCCAAAAGGGATTCGCTCGCTCCTACAAGCTCCAGCAGCATATGCGCATCCACAATGGCGAACGGCCCTACAAGTGCACCTACTGCGACAAGAGCTTCACACAGTCCAATGATCTCACGCTTCACATACGACGACACACCGGCGAGCGACCCTATCAATGCGACACCTGCGGGGAACGCTTCATTCAGGGCACAGCACTCAAGAATCATCGGCTACAGAATGGCCATTTCGGGACGGGGGATGGCCtagccaaaaataattaa
Protein Sequence: MFPTDICRTCALHDANLLALSTCTEKYANKSFHDMLHELTPNDPLMEHSDENLPQYLCGDCLRKLEEAYAFVLQARQVQEQLLHKIRKGLQCLDETPIDIAPEHIKTETNLDGHNDKVASEPVAALKVQPESETESCPRDPADDDVLDLKPSQLRRSNRKTKLGTDSEQENEADRKKSSAMPLKRRRGRPARMPKRETINKDGRHACEVCGKTFSWHRDMQRHARVHFEQAGYVCDSCGKGFLRKDKYMFHLRSHEKRQAKRQALQLGNEWRFAERLYSAGRLKRVECKLCGLKCQRIQELREHLASHVSIETLSNLSADSDVIVEQFNGQQLDLMQIKQQVCADIAQGRDHLDKFCVVVNAHGYELCLSDSDEEVAGMTPPYQCQACNTLFSRKYRLMRHTLEEHTEPTTEATPWQRCNQCQIGFVCVKLLEQHQRTQCHNQMKRYSCPNCPGKFIWRQNLKHHACSQRMRCSEAHDQERSQSRQIQCCLCDEQLPSMSALRAHLVTHCDGQSGINPDRRSTFFRCNYPDGSTCNQTELSTQIARDFGAEDYGRYFNACTGSGQELDFFDSDTDLSDQSAADVHSCDLCGVSTRRLAQLLKHQQNQHSEVNDPLPHVCDKCGLGFVAESLLRQHRRRICGKRHAKFHCQHCNLAFIWQSNYERHMELQHEAEADDVADGVPNTRLRSKRQQAAKLQCNECEKVFIWPKDLTRHKRLHQPQASAQYECSYCERKFHRKDGLKSHMRVHGEQHLDVAVLPSGDPDPTALQRMPMVLTQLCQPNGCKLIQCMICHSRHTKISDLRMHLAKHQFAVEFAEERAEPENIESICRALYPEQVTLLDKQQLIERIQMDVGMGTELDRFISITNEAGIELSLDSSETETDSDSTEVERRSSGRQYYCDLCQLNWPRKHQLYAHQLEQHTWEQATHVCAHCQARFINDQLLDHHYRSLCRNVHKRFLCRKCPLRFRWRDNLKLHSDVAHLETTGEQTSLGIQLNGAGVLPVVSYDCADCNRSFKMQKDLTRHTLMHAQESSIYRCRWCARRFYRQANLLQHIERHGINAAQLPYAESLLNASRHPHGPKCIQCKVCDIHFSTIAALRSHLASTPSGTHHEMGSMLNYSITNQLGYELHLEDSETDEEAKPPGIPSHYTCGMCQLRCVRKFELHQHQQAMHRLERITEGCDQCIYKSVSPHLIEYHRRVQCCNTEKQFKCVKCGYKFMWESNLLLHIQLQHPSTDETGAVPDSETPAVESQIFQCGQCPRKYNRKDRLTAHVKKCHAPGAVGPTVSPTKSSTSSAVSKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDFCDMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHNGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCDTCGERFIQGTALKNHRLQNGHFGTGDGLAKNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00558059;
90% Identity: iTF_00601963;
80% Identity: -