Dqui000673.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila quinaria
Gene Symbol
-
Assembly
GCA_035047525.1
Location
JAWNPO010000036.1:489111-497674[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 2.3e-05 0.0018 18.9 2.1 1 23 28 50 28 50 0.97
2 22 7.6e-06 0.00061 20.5 0.4 1 23 56 78 56 78 0.97
3 22 0.0011 0.089 13.6 0.9 1 23 84 106 84 106 0.95
4 22 1.6e-05 0.0013 19.4 3.1 1 23 112 134 112 134 0.97
5 22 3.7e-05 0.0029 18.3 4.7 1 23 140 162 140 162 0.99
6 22 6.7e-05 0.0053 17.5 5.7 1 23 168 190 168 190 0.97
7 22 3.3e-07 2.6e-05 24.8 4.3 1 23 196 218 196 218 0.98
8 22 1.2e-07 9.4e-06 26.2 2.4 1 23 224 246 224 246 0.97
9 22 5.3e-06 0.00042 21.0 5.5 1 23 252 274 252 274 0.97
10 22 2e-06 0.00016 22.3 6.4 1 23 280 302 280 302 0.98
11 22 9e-06 0.00072 20.2 3.3 1 23 308 330 308 330 0.98
12 22 2.8e-06 0.00023 21.8 6.4 1 23 336 358 336 358 0.98
13 22 6.9e-05 0.0055 17.5 6.7 1 23 364 386 364 386 0.97
14 22 0.00012 0.0095 16.7 6.5 1 23 392 414 392 414 0.98
15 22 1.1e-05 0.00085 20.0 4.5 1 23 420 442 420 442 0.98
16 22 7.7e-06 0.00062 20.4 8.1 1 23 448 470 448 470 0.98
17 22 6.3e-06 0.0005 20.7 7.6 1 23 476 498 476 498 0.97
18 22 7e-07 5.6e-05 23.7 7.7 1 23 504 526 504 526 0.98
19 22 0.00022 0.018 15.9 9.5 1 23 532 555 532 555 0.95
20 22 7.8e-05 0.0062 17.3 0.9 1 23 561 583 561 583 0.98
21 22 0.00085 0.068 14.0 3.4 1 23 593 615 593 615 0.97
22 22 9.7e-06 0.00077 20.1 1.6 1 23 621 644 621 644 0.96

Sequence Information

Coding Sequence
ATGGAGGGCGGCATTCATGGCGTCGATGGTCAGTCGAGCGTTTCGTTGGCGCCGGATGGCACGCCCATAGCGACTGGTACGCATGTTTGCGATATTTGTGGCAAGATGTTCCAATTTCGTTATCAGCTGATTGTGCACCGTCGCTACCACAGCGAGCGCAAGCCGTTTATGTGTCAGGTGTGCGGTCAGGGCTTTACCACATCGCAGGATTTGACCCGTCATGGCAAAATCCATATTGGCGGTCCCATGTTCACCTGCATTGTTTGCTTCAATGTGTTTGCCAATAATACTAGCTTGGAGCGACACATGAAAAGGCATTCAACGGACAAACCATTCGCCTGCACCATTTGCCAAAAGACTTTTGCACGCAAAGAGCATCTGGACAATCATTTTCGTTCGCATACGGGCGAAACGCCGTTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTCACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCGCATCAGTGCGATGTCTGCGGCAAGAAATACACGCGCAAGGAGCATCTAGCCAACCATATGCGTTCCCACACCAACGAGACGCCGTTCCGTTGCGAGATCTGCGGCAAGAGCTTTAGCCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGGCGAGACGCCGCATCGGTGCGACATCTGCTCCAAGACGTTCACGCGCAAGGATCATTTGTTAAATCACGTGCGCCAGCACACGGGAGAAACGCCGCATCGCTGCACCTACTGCCCGAAGACGTTCACCCGGAAGGAGCATCTGGTGAATCATACACGCATGCACACGGGTGAGACACCGTTCCAGTGCACGTACTGCACGAAAGCGTTCACACGCAAAGATCACATGGTTATTCATGTACGGCAACATACAGGTGAAACGCCCCACAAGTGTACATACTGTGAGAAGACGTTTAACCGTAAGGAGCATCTAACGATTCATATACGCCAGCACACGGGCGAGACGCCACATCGGTGCGACTTCTGCTCCAAGACGTTCACGCGCAAGGAGCATTTGTTAAATCACGTGCGCCAGCACACGGGAGAGTCGCCGCATCGCTGCTCCTACTGCATGAAGACGTTTACGCGCAAGGAGCATCTGGTGAATCATATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACACGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCAcaagtgtacatactgcacgAAGACGTTTACCCGTAAGGAGCATCTAACGAATCATGTGCGACAGCACACGGGCGATTCGCCGCATCGTTGCAGCTATTGCAAGAAGACGTTCACCCGGAAGGAGCATCTGACGAATCATGTCCGACTACACACTGGAGATTCGCCCCATAAATGCGAATATTGCCAGAAGACCTTTACACGCAAGGAGCATCTCAATAATCATATGCGTCAGCATTCTAGCGACAATCCCCATTGTTGCAACGTTTGCAACAAGCCCTTCACCCGCAAGGAGCATCTGATCAATCACATGTCACGCTGCCACACCGGCGATCGCCCCTTCACCTGCGAGACGTGCGGCAAATCGTTCCCCCTCAAGGGCAATCTACTTTTCCATCAACGCAGCCATACCAAGGGACAGGAGTGCGAACGTCCGTTTGCCTGCGAGAAGTGCCCCAAGAATTTCATATGCAAAGGTCACTTGGTCTCGCACATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACACTGTGCAGCAAGGCTTTCGTCGAGCGGGGCAATTTGAAGCGCCACATGAAGATGAATCATCCGGATGCTATGATGCCGCCACCACCCATACATCCGCATCCGCAAATACCGGCTGGTGTGCTGACCCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCCCATCACTCGGCGACGACAACGATGCACACCATACAACAGATAACAGCTGGAGCCGCTGCAGCTGGGGCCGGTGCCGTCCAGTTAACGCCAGGATTGGTGCCGCTGGTCACGAGCTCGCTGATCTCGCACAATGCCCAGCAATcgcagaagcaacagcaggtggcagcagcagtcgcTGCCCAACAgcaagcggcagcagcagccgcggCACAACAAcaggcggcggcagcagcggccGCACAGCAGCAGGCAGCGGTAGTGGcacatcagcagcatcagcaacaggttgctgcacagcagcaacaacagcaacagcaggcgGCGGTGGCagcacatcagcagcagcaacaacagttgcagcagcaacaattgctgcaATTATCGATACAACAGGCGgcgcatcatcatcagcagcaacagcagcatcaacagcagcagcaacaacagcagcagcaacaccatcagcagcaacagcagcaggccCATCCGCAGGCAccgccacagcagcaacagccaccGCCACAGGTGCCGATTGCATTGATAAGTGATCCTAGTGCATTGGCCAGGGCTGCCATGCAGCTGCAGCATCTGCCCAGCAATGTTGAGCAACATCCGGTGGTTTACTAA
Protein Sequence
MEGGIHGVDGQSSVSLAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDICSKTFTRKDHLLNHVRQHTGETPHRCTYCPKTFTRKEHLVNHTRMHTGETPFQCTYCTKAFTRKDHMVIHVRQHTGETPHKCTYCEKTFNRKEHLTIHIRQHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPIHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAAAGAGAVQLTPGLVPLVTSSLISHNAQQSQKQQQVAAAVAAQQQAAAAAAAQQQAAAAAAAQQQAAVVAHQQHQQQVAAQQQQQQQQAAVAAHQQQQQQLQQQQLLQLSIQQAAHHHQQQQQHQQQQQQQQQQHHQQQQQQAHPQAPPQQQQPPPQVPIALISDPSALARAAMQLQHLPSNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00599004;
90% Identity
-
80% Identity
-