Dqui018538.1
Basic Information
- Insect
- Drosophila quinaria
- Gene Symbol
- -
- Assembly
- GCA_035047525.1
- Location
- JAWNPO010000510.1:1350960-1352570[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.8e-16 1.3e-12 47.5 0.0 2 45 367 410 366 410 0.95 2 3 0.038 73 3.5 0.0 27 37 439 449 436 454 0.89 3 3 4.4e-19 8.5e-16 57.8 0.0 2 42 476 516 475 518 0.96
Sequence Information
- Coding Sequence
- ATGGGTCACTCGTCCACAATTATGGATATCCAGCGCGTTCTTCTCAACCAGCAGAGCAGCAACGAAAGCTGCGAGGTATTGCTGGTGGCCAAAGATGGTATCAGTGTGCGGGCTCATCTCTTCGTTCTCAGCACGTGCAGCGATCTCATGCGCAACTTGCTGGTGGATTTACCTGTCGGCCAGGAGGCAACCGTCATTCTGCCCGACATTCGAGGCGAGCTGCTGGAGAGCATGTTATCGTTCATTTACATGGGAGAAACCAGCCTATCATCTGCCCTGCTCACCGAGTTTCTGGAAGCGATCAACTTGTTGGGCATCAAATCTGCCATCAGCTTTGAAACGAATCCCACAGCGATGACCAGCTCAAATGTTGTCAGCGGCGCAATGGCTGTTGAGGCAGCCAAATCGATTAGTGGACTGCACATTGCGAATACAGCTCTaatggaggaggaggaggaagaggaggctAACGTGGTTGTTGGCAAACTAGAAGTGGGCAATTCTGTACTCACTGATCCGCAACAGAGTCATCAGCAGGACGGAAGAACCTTGGAATTTCTGGATGTGTACACGGATCAGCCAAAAATCACATATTCCATTGAGCATATGGGCGGCACATCGAGTGGCAATCAATATATATTAACGGAGAACACCGGCACATTTACCATAACAcaatccgcatccgcatcctcTGTGGCAAAATTGGGAGGAGGAGCTGTGGTGGAACAGGTAACCGCTGGTGAGTTGGCTGTGGATGATGCGGAAGCCGATGTTATGGACGATCACGAGGAATCCGAGTCACATTTAATCGAAGAGGACTATGTCCCATCATCGGGTCCACTAATTGAGATGGGTGCggatggtgatggtgatgcCGATGCTGATATGACTGAAGATGTAATGCACGAGGATGATGCTGGCgaggaggaagaagaagaggaattACTAGATGTCAAACCTCGCAAATCGCAGCTAGAcatgaaaatcctaaaaacaAAGGTACAGCCGCGTTCAACGACCTCAAAGGCGTCCAAGAAAACAATGACCAAACAGCATCAACAATATGCGGCACTCAAAAAGGAGATCAAGGACGACATCAATGATGCCCTGGAACTGGCCGCAGATGCCGTGCTCCACGAGGGTCTCAGTCTTCAAAAGGCTGCGGATCGCTTTGACATATCCAAGACCGTATTGTGGCGACGTGTGCGCTCCAATCCGGCGTACATGAGAATCAAGCGTGAGAAGCCCTCTCTCTCGGAGGCGTATGAGCGTCTAAAGAACGGCGATTCGCTGAAAAGCATTAGCCAGGATCTGAGTATACCCATGTCCACGTTACACCGGCACAAGGTGCGGTTGGCGGCCCAGGGTCGTTTACCAGAATTCGTTGCCTGCCGGCGACGTGACAGCACACCGAAGGACGAGCTGCGAGACAAGTTGGCCAAGGCGGTGCATGCCTGTGTCAATGGAGGCATGTCCCAGAATTATGCGGCAAATCTCTTTGAAATACCCAAGAGCACACTCTGGCGACACTTGCAGCGTCGGGTCACGGAGGCAGAGCGAAAAGTgaaggaggagcaggaggaagAAGATGAGGAGGACGCTCTCAACTAG
- Protein Sequence
- MGHSSTIMDIQRVLLNQQSSNESCEVLLVAKDGISVRAHLFVLSTCSDLMRNLLVDLPVGQEATVILPDIRGELLESMLSFIYMGETSLSSALLTEFLEAINLLGIKSAISFETNPTAMTSSNVVSGAMAVEAAKSISGLHIANTALMEEEEEEEANVVVGKLEVGNSVLTDPQQSHQQDGRTLEFLDVYTDQPKITYSIEHMGGTSSGNQYILTENTGTFTITQSASASSVAKLGGGAVVEQVTAGELAVDDAEADVMDDHEESESHLIEEDYVPSSGPLIEMGADGDGDADADMTEDVMHEDDAGEEEEEEELLDVKPRKSQLDMKILKTKVQPRSTTSKASKKTMTKQHQQYAALKKEIKDDINDALELAADAVLHEGLSLQKAADRFDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLKNGDSLKSISQDLSIPMSTLHRHKVRLAAQGRLPEFVACRRRDSTPKDELRDKLAKAVHACVNGGMSQNYAANLFEIPKSTLWRHLQRRVTEAERKVKEEQEEEDEEDALN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00610763;
- 90% Identity
- iTF_00510457;
- 80% Identity
- iTF_00585322;