Dqui016303.1
Basic Information
- Insect
- Drosophila quinaria
- Gene Symbol
- retn
- Assembly
- GCA_035047525.1
- Location
- JAWNPO010000471.1:1585976-1598211[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-26 6.7e-23 81.3 0.0 2 89 20 105 19 105 0.96 2 2 0.79 2e+03 -0.4 0.2 7 39 253 291 239 307 0.65
Sequence Information
- Coding Sequence
- ATGCTCATCTCTGAGGATCAAATACAGGAGCTCTATGAAATTAATGATGATCCCAAACGCAAGGAGTTTCTCGAtgatttgttttcatttatgcAAAAGCGCGGCACGCCCATCAATCGCCTGCCCATAATGGCCAAATCGGTGCTGGATCTTTATGAACTGTACAATTTGGTGATAGCACGCGGTGGACTCGTCGATGTGATTAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCCGCATTCACACTACGCACCCAATACATGAAGTATCTCTACCCATACGAGTGCGAAAAGAAGAACCTCAGCACACCGGCCGAGCTGCAAGCGGCCATCGATGGCAATCGTCGTGAAGGACGTCGCTCCAGCTATGGCCAATACGAGGCCATGCACAATCAGATGCCACTGACGCCCATTTCACGTCCACCAATGCCGGGTGGCATGCAACAGATGTCGCCACTGGCGCTGGTCACACACGCCGCGGCGGCCAACAATCAACAGGCGCAGGCAGCGGCGGCCGCGGCGGCAGCGCATCGTCGACTGATGGGCGGACCGGCATTTGGCCAGATGCCCAATCTGGTGACACAGGAGATCGAGAATCGCATGATGGAGTATCTGCAGCTGATACAGGCCAAGAAGGAGCAGAATGCTGGCCCAGTGCTTGGCGCCACACATCcccaccagcaacagcagcagcaacagtcgctGCATCatcaccaacagcagcagcagcagctacagcagcagcagcaacaacaacaacagcgacaacgcTCTCAGAGTCCCGAAATAAGCACGCGCGATGCGTTGAGCGCTCAGGTGGCGCTTTGGCACATGTACCACAACAGCAGTCCACCAGGCTCGGCCCACACCTCACCACAGCAACGCGAAGCCTTGAACCTTTCCGACTCGCCGCCGAATCTCAATCTGAGTCACATTAAGCGCGAACGCGAACGTGATCCAACACCCGAGCCGGCGGACCATGAGGATGCACCGCATCAACCGCCACCGGCCAAGCGGGTGGGCAGCGGTCTTATGCCGCCTGGTTTTCCTGCCAACTTTTACTTGAATCCACACAACATGGCCGCCGTGGCAGCCATtactcatcatcatcagcatcagcagcagcaacaggacgCGGCGTCTGAAGGCGAACCGGAGGATGATTACGGAAATGCCGAGCATAATACAACGGGCAACTCATCGTCCGTGAACGATGACAATGAGCCACAGCAGCTGAATGGGcatcaccaccaccaccaccaccatcatcatcagaaTCATCTGGACAAGTCGGATGACTCGGCCATTGAGAATTCACCCAGCACTTCCACAACGGCATCCGCATCCGGCGGACATCGCCACAGCTCGCCGGTGTCCACAAAAAAGAAGAATGCGAGCAGCAGTAAGGCACAGTCGAGTCCCAAGGATGCACAGCACGAGCATGGCACAGCCAAGGGCGGCGGTGCCCAGTTGAATCCCCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACTGGCGCCAATGGTGAGCAGCAGCTGATTGTCAACCTGGAGCTGAATGGCATTAAGTACTCGGGTGTCCTGGTCGccaatgcagcagcagcagccagaaCAGACCCAAGAGTCGAGGACTCGGACACGGACGCGGTAAATGCTGCAGCTGCCACGACCGAGGAAGGGGCAACGTCGGAGGAGGAGGCTAACAATGCGGTCAAGCACGATAATAGCCAGGAAGTCGACCAGAACGAGGCCATTGACGAGGAGGAATCGGAACAGCCCGCCGATGACATTGTGAATGGAGTGGGCGGTGCTGGCAATGGGGGCACTGTAACGGGGGGCGTATCCCTGCTCAAGGATGCTGTGGTCAGTTCGTAG
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPMPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQNAGPVLGATHPHQQQQQQQSLHHHQQQQQQLQQQQQQQQQRQRSQSPEISTRDALSAQVALWHMYHNSSPPGSAHTSPQQREALNLSDSPPNLNLSHIKRERERDPTPEPADHEDAPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAITHHHQHQQQQQDAASEGEPEDDYGNAEHNTTGNSSSVNDDNEPQQLNGHHHHHHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKNASSSKAQSSPKDAQHEHGTAKGGGAQLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVANAAAAARTDPRVEDSDTDAVNAAAATTEEGATSEEEANNAVKHDNSQEVDQNEAIDEEESEQPADDIVNGVGGAGNGGTVTGGVSLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00510317;
- 90% Identity
- iTF_00557685;
- 80% Identity
- -