Basic Information

Insect: Drosophila quadrilineata
Gene Symbol: -
Assembly: GCA_018150725.1
Location: JAECWN010000375.1:7719852-7723419[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 4.7e-06 0.00027 21.1 1.7 1 23 228 251 228 251 0.94

2 17 0.0011 0.063 13.6 2.1 1 23 258 280 258 280 0.98

3 17 1.9 1.1e+02 3.4 4.2 2 23 312 333 311 333 0.95

4 17 0.0069 0.4 11.1 4.4 1 23 423 446 423 446 0.97

5 17 0.12 6.9 7.2 0.5 1 19 453 471 453 474 0.92

6 17 0.0078 0.46 10.9 3.0 1 23 483 505 483 505 0.95

7 17 4.2e-05 0.0025 18.1 0.4 1 23 512 535 512 535 0.97

8 17 9.6e-05 0.0056 16.9 1.1 2 23 543 564 542 564 0.96

9 17 0.0013 0.076 13.4 0.1 2 21 591 610 590 611 0.94

10 17 0.008 0.47 10.9 2.0 1 23 658 681 658 681 0.96

11 17 0.0003 0.018 15.4 0.6 1 23 718 741 718 741 0.96

12 17 0.00015 0.0086 16.4 1.6 2 23 780 802 779 802 0.95

13 17 0.00088 0.052 13.9 0.4 1 23 816 838 816 838 0.95

14 17 0.00013 0.0078 16.5 0.9 1 23 844 866 844 866 0.99

15 17 3.8e-07 2.2e-05 24.5 2.6 1 23 872 894 872 894 0.98

16 17 4.2e-05 0.0025 18.0 3.8 1 23 900 922 900 922 0.97

17 17 0.0023 0.14 12.6 0.2 1 23 928 952 928 952 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	4.7e-06	0.00027	21.1	1.7	1	23	228	251	228	251	0.94
2	17	0.0011	0.063	13.6	2.1	1	23	258	280	258	280	0.98
3	17	1.9	1.1e+02	3.4	4.2	2	23	312	333	311	333	0.95
4	17	0.0069	0.4	11.1	4.4	1	23	423	446	423	446	0.97
5	17	0.12	6.9	7.2	0.5	1	19	453	471	453	474	0.92
6	17	0.0078	0.46	10.9	3.0	1	23	483	505	483	505	0.95
7	17	4.2e-05	0.0025	18.1	0.4	1	23	512	535	512	535	0.97
8	17	9.6e-05	0.0056	16.9	1.1	2	23	543	564	542	564	0.96
9	17	0.0013	0.076	13.4	0.1	2	21	591	610	590	611	0.94
10	17	0.008	0.47	10.9	2.0	1	23	658	681	658	681	0.96
11	17	0.0003	0.018	15.4	0.6	1	23	718	741	718	741	0.96
12	17	0.00015	0.0086	16.4	1.6	2	23	780	802	779	802	0.95
13	17	0.00088	0.052	13.9	0.4	1	23	816	838	816	838	0.95
14	17	0.00013	0.0078	16.5	0.9	1	23	844	866	844	866	0.99
15	17	3.8e-07	2.2e-05	24.5	2.6	1	23	872	894	872	894	0.98
16	17	4.2e-05	0.0025	18.0	3.8	1	23	900	922	900	922	0.97
17	17	0.0023	0.14	12.6	0.2	1	23	928	952	928	952	0.90

Sequence Information

Coding Sequence: ATGAAGCTGCCGGTCATGTGTCGCACCTGCGATACAAGAGACACCGATAGACTCTACAAGCTGACAACAGCCACCAAGAAGTATCCCGATAAGCTCCTCTCTGACATTCTAAGCGAATTAACGCAGATTGATCTGACAGAGACAGGAGCACAACGACTGCCCCAGTGTCTGTGCGGCAGCTGTGCCAGGAAACTAATATCGGCATACTATTTTGTGAAACAGGCGCTGGCTGCCAATGAGCTATTGCTGAATCATGTCCAGGACACGGATAAGGCAGTCAGCAGCGACTGTTTGCAGGAGGTGCCCATGGAGTTGTGCGCTGAGCAGCATGTCGAAGTTAAGATGGAAACGGTGGAAGAGGATATAGAAATATCCTGCACTGAGATACGCGACATCAGTGCAGTGCAGAACTCCAACGAGGTGTATGGTGCAATAGAGCGGGAACTGGAAACTAAGAATCGGTCAACGGATCCGCTAACAATGCTAGATCTTGATCCGGTCAAACTGGAGGAGGACGGCACAACTGATATGCAGGAGCAGGAATACAAATATAAGGCTGACAACGATGACGACGATGAGGAGGAAGTCGAAGGAGAGGAGGAATCCCTCGACGATTTGCCTCTTCAGCAGCGCGTCCACAAGTGGAAAACAACAGATGGTATACGTCTTAAAAGGCAAATCTTTGAGTGCAAGGAATGCCCCAAGAGCTTCAAGCGTCCGAGGTATTTAAAGCAGCACTCCTCACGGGTGCACAAATCCAAGCAGGACTTGTATTCCTGCTCCTTCTGTATACGCAAGTTCCGGCATAGCGAAGCTCTCCAGGCACATCTCAAAGTACACGGTGATTCCAAGCGTTCAGCCAATCTGGGCGAGAGCAAAAAGGCCAAGGACATTGATGTGAATGTGTGTAAGCCACATGGCTATAAGCTGATCGAGTGCATGATCTGTCAGAGTCAATACGACAAGATCTCCCACTTACGCCATCATCTGGAGCATCATCCGGAGATTGTCAACTTTGGCACACGCTCCAGTCTGATGCCAAATGAGCTATCTGAGCTCTTTTATCCCGATCTGAAGGATATCAGTGTGGAGAAACTCAAGATGCTGATTCGCAAAGATCTGAATACGGGGAGTTATCAACGTTTCTACTCCATAACAAATCAGTCTGGCTACGAAATGGATCTGGACAGCTCCGAGACAGAAAGTGAATTAGAAGTGGATGCGGATGAACTGTCCAAGAAAAATCGCAATCTGCCCAAGGCCAAGTATCACTGCGAGTTGTGCCAGGAGCGCTATCAGCGCAAGTATCAGCTCTATGATCATCAGCGGCAGACGCACGCCTGGCTGGAGGCACCGCACATCTGTGGACGCTGTGATGCACGCTTCGTTAGTTTGCAGCTGCTGCGGCATCATAATGAATCCCAGTGCAAGAATTCCCAGAAGCGTTTCCTTTGCAACAAATGCCCACTCCGATTTCGCTGGCGGCACAATCTCAAGCTGCATCTGAGGGAACATCGCATCACGAATCAAACCTTTGAGTGTGCGGACTGTAAGCGAGTCTTTGACAAGAAGAAATCCCTAACCGTTCATCTGCTCAGTGTGCATGCGGAGCAGTCCAAGCTGATACCATGTCAGTGGTGCAGCCGTAAGTTCTATCGCCGCGACTATCTCGTCAAACATTTGAAGCGTCATGGCATCCGGGAGCAGGATATACCCCTAGCCGAGACCCTCATTGCGGCCACATCCAAGCCAAATGGCAGTAAACGCATCTCCTGCAAGATCTGCAACATGCACTTCAGCCGCATCATCGATCTGCGTGCCCACATACAACTGGAACTGAAGCTCGCCCTGTCGCTACACCAGAACTACGAATCCCCCCACAACTATTCCATAACGAATGAGTCGGGGTATGAGCTGCACCTAGGTGACTCCGAGACCGAGGATGAACTGCAGGCCAACACACGTCTCGCCTACATCTGCGAACTGTGCAAGGTGCAGTGCAAGCGGAAGTACGAGATGATACAGCATCAGCGTGCCATGCATCGATTCGACAAGATGCCCCATGAGTGCGACCTTTGCATCTTCAAGTGCGTCTGCCAGAGCATCATGGACCAGCATCGTCAATCGCAGTGTCATAGTGCCGACAAAAAGTATTCGTGCAGCAAATGCGGTTACAAGTTCATGTGGCCGGAGAATCTGCAACAGCATATGCAGCTGCAACACGGCAACCTGACTGCAGCACAATCCTTGCCAGTTGCTGGTGAAGCATCCACAGCGGATGGCATACCTGAAGATGCCACTGATCACGCCATAGATACCACCGCGTTGCAGCTGTTGCAATGTCCGCACTGCGACCGCACATATCAAATGAAGTCACGGCTGAACAATCACATACGGGACGTCCACATCAATGGGGATCGGAAACGCAAGGAGGCCATGAAGAAGTTCCTATGCTCGCTGTGTGGCCGTGAAACGCAATCCGCCGCCACCTTGCTCACCCATATGCGACGACACACCGGCGAGAAGCCCTTCAAGTGTGATCTCTGCGAGATGGCATTTCCACGGCACTCGGAGATGATATCGCATCGCAGAATCCACACGGGCGAGAAACCATTCCATTGTACAGTGTGTGGCAAGGACTTTGCCCGCTCCGATAAGCTGAAGCGGCACATGCTCACCCACAGCGGGTTGAAGCCGCACAAGTGCACGTACTGCGAGAAGAGCTATCGGCAGGCGAAGGATCTGAAGTTGCATTTGCAACAGCATACCGGGGAGTGCCCCTTCATCTGTGGCACCTGCGGCGAACGTTTCATTCAGGGCACGGCGCTGGAGAAGCATCGCATGATGCGACGGCATTTCGACGATGTCGATGAACGCGCCGCATCGCAACTGATTCCAACTTGA
Protein Sequence: MKLPVMCRTCDTRDTDRLYKLTTATKKYPDKLLSDILSELTQIDLTETGAQRLPQCLCGSCARKLISAYYFVKQALAANELLLNHVQDTDKAVSSDCLQEVPMELCAEQHVEVKMETVEEDIEISCTEIRDISAVQNSNEVYGAIERELETKNRSTDPLTMLDLDPVKLEEDGTTDMQEQEYKYKADNDDDDEEEVEGEEESLDDLPLQQRVHKWKTTDGIRLKRQIFECKECPKSFKRPRYLKQHSSRVHKSKQDLYSCSFCIRKFRHSEALQAHLKVHGDSKRSANLGESKKAKDIDVNVCKPHGYKLIECMICQSQYDKISHLRHHLEHHPEIVNFGTRSSLMPNELSELFYPDLKDISVEKLKMLIRKDLNTGSYQRFYSITNQSGYEMDLDSSETESELEVDADELSKKNRNLPKAKYHCELCQERYQRKYQLYDHQRQTHAWLEAPHICGRCDARFVSLQLLRHHNESQCKNSQKRFLCNKCPLRFRWRHNLKLHLREHRITNQTFECADCKRVFDKKKSLTVHLLSVHAEQSKLIPCQWCSRKFYRRDYLVKHLKRHGIREQDIPLAETLIAATSKPNGSKRISCKICNMHFSRIIDLRAHIQLELKLALSLHQNYESPHNYSITNESGYELHLGDSETEDELQANTRLAYICELCKVQCKRKYEMIQHQRAMHRFDKMPHECDLCIFKCVCQSIMDQHRQSQCHSADKKYSCSKCGYKFMWPENLQQHMQLQHGNLTAAQSLPVAGEASTADGIPEDATDHAIDTTALQLLQCPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAMKKFLCSLCGRETQSAATLLTHMRRHTGEKPFKCDLCEMAFPRHSEMISHRRIHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFICGTCGERFIQGTALEKHRMMRRHFDDVDERAASQLIPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00519319;
90% Identity: -
80% Identity: -