Basic Information

Insect: Drosophila putrida
Gene Symbol: -
Assembly: GCA_037043535.1
Location: JBAMBI010000346.1:846223-850670[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00044 0.03 14.8 0.1 1 23 170 193 170 193 0.96

2 14 0.0015 0.11 13.1 2.9 2 23 242 264 238 264 0.89

3 14 0.013 0.91 10.1 0.9 1 23 365 388 365 388 0.93

4 14 0.68 47 4.8 6.1 2 23 437 458 436 459 0.95

5 14 0.0035 0.24 12.0 0.5 1 23 531 554 531 554 0.88

6 14 2.1 1.5e+02 3.2 0.1 2 14 573 585 572 597 0.85

7 14 0.00073 0.051 14.1 3.3 2 23 605 627 605 627 0.96

8 14 0.0016 0.11 13.0 0.1 1 23 736 759 736 759 0.95

9 14 5.2e-05 0.0036 17.7 0.4 1 23 822 845 822 845 0.92

10 14 0.0012 0.085 13.4 2.2 2 23 895 917 894 917 0.97

11 14 0.0035 0.24 12.0 3.8 1 23 1007 1029 1007 1030 0.94

12 14 0.056 3.9 8.2 1.5 1 21 1082 1102 1082 1103 0.95

13 14 0.52 36 5.1 0.6 3 23 1147 1169 1145 1170 0.88

14 14 2.5 1.7e+02 3.0 0.5 1 10 1188 1197 1188 1212 0.64

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00044	0.03	14.8	0.1	1	23	170	193	170	193	0.96
2	14	0.0015	0.11	13.1	2.9	2	23	242	264	238	264	0.89
3	14	0.013	0.91	10.1	0.9	1	23	365	388	365	388	0.93
4	14	0.68	47	4.8	6.1	2	23	437	458	436	459	0.95
5	14	0.0035	0.24	12.0	0.5	1	23	531	554	531	554	0.88
6	14	2.1	1.5e+02	3.2	0.1	2	14	573	585	572	597	0.85
7	14	0.00073	0.051	14.1	3.3	2	23	605	627	605	627	0.96
8	14	0.0016	0.11	13.0	0.1	1	23	736	759	736	759	0.95
9	14	5.2e-05	0.0036	17.7	0.4	1	23	822	845	822	845	0.92
10	14	0.0012	0.085	13.4	2.2	2	23	895	917	894	917	0.97
11	14	0.0035	0.24	12.0	3.8	1	23	1007	1029	1007	1030	0.94
12	14	0.056	3.9	8.2	1.5	1	21	1082	1102	1082	1103	0.95
13	14	0.52	36	5.1	0.6	3	23	1147	1169	1145	1170	0.88
14	14	2.5	1.7e+02	3.0	0.5	1	10	1188	1197	1188	1212	0.64

Sequence Information

Coding Sequence: ATGGAAGGTATGGACTTATGGACATCCATGTTTTCGACGGACTTTGAGGAGGGCGAGGGCGACGGCGACGTTGAGGGGGATAGCTACAATAACAACGCGCAGGCAGACGACTTTATGGGTGAAGAGGAGGGTGAGGAGGAGGACCAAGAGGGTGATATAGACGAgattgatgatgatggggaGGGTGATGACAGTAGACGTCGTCAGGGAAAGCGAAAGAGACATGAgcctgatgatgatgccatATTTGATTTCGAATTGGAGCCAATTGTTAATATTGCTGAACCACAACCAGAACGGAGAGGAACTGTCGCATTGGCGCCACCAATGCCATCTGGACCACCTGTAAGGGGAATGCACCACCGTCAATCATTGCCAGCATCGTTTGGATCAGCATTAATGCCACGAGGATCTGGCGGAGGAACAGCCCCAACACGGCCAACGACTTCACAAATCAATGCCACCGATGAGAATGGTGTTccaattaattatgaattggGAGTTATTTACATATGTCCTGCATGCGGTGCCGAATATCGTCAGCAGGATATGTGGAAGCGTCACATGAACCAAATGCATCAGTATAACACACGCAAAGGACTCAATTTTGTGGCGATCGATAAGCTGTATCATCGGTGCCTAGAGTGCAACAAGCGGATTGCGATGCACAGTCGAGAGAATCTTCTCAAGCATAAGTTTACCCATTTGCCATATCGGTGCACCAAGTGTTATATATGTAAGCGAGAGTACAAATACAGGCAGGACCTGATGGTGCATCTGCGTATGGTGCACTGTGATGAAGTGGTTGCCATGATGCGAGAAGGCGACGGCACAGCTGGAAGAAAGACTCGTGTCCGTGAACCACGTACCGAGCAACATCTAACTCTTCAACCTCCCCAAATCCATGACGATGATCCAGATTGCCTAGAAGTGAGAAATGAACAAGTTGAAACCGATGGTCCTGCAGGCACTGAGACCAACATCGGTTTGGATGACGATCCAAACTCATTAGCAAAGCGAAAGCGTAGTAATCCAGCTACAGGCAATGGGAATGGCAATAGTGCTGCAGATATGTGTGAGGATTACATACACTACATGTGCCCGGATTGTGGCACAGACTGTGACACTCATGCCCAGTGGAGTCAACACATTGAATTCGTGCACGATTATGTGAGCAGGCGAGGACTCAACTTTCGATGCGTCGATATGCAGATGCAGTGCCTGGAGTGCAAACAGTTTGTTATCCCAAACACGATCAAAATATTGCGAGCTCACAAGTTCAGCCACTTGCCACAGCCTGATTGGATGCGTTGCAAGTTGTGCTATAGGGGCTATAAGGAGCATCACGAACTGGTCACGCATCTGCTTAAGCATCACCATCTGGAGACTTTAATGCCCGACGCTGAAGAGACGGAGGAAACAATGCCCAGTGCTAGTGCCGAAGATGATGCCGAGGAAAATgctgacaatgacaatggcaacggtaatggcaatggcaatggctgcGATGATGAGTTGTTGCATTGGGATGAGGCACCACGTCGAGGAGGTCGCATAAGTAGTGATGATATGTATGAGCCTCACATTGACTATCTCTGTCCGCAGTGTGGCAGGGAGTTCATCGAGAAGAAACACTGGCGTACCCATGTCGTCCAAGTGCATGGCATGAACGATTTGGCCAAACTGAACTTTGAAGTAATCAACGATCGACAATTGAAGTGCACTGAATGTGACAAGATCATTACGAATGCGTATGGCATACAGAATGCCCAACAACATCGGATTACGCATTTGCCGTATAAGGCGTATGCACGTTGCCGCAAGTGCCACAAATCGTATACGGATCGCAAGGGTTTGGTCAAGCATTTGGCCACATACCATCGTGTAGGATACGAGCCGCGTAAACATTCTGGTGGACCAGGATTGAGCTCGGGCAGTGGAAGCGGTGGTATCTCTGCAAGTGGTCAGTCTTCCAAGTCccaacaaccaccaccaccacgtAAACAAATTGTCACGGTGGCAAATGAAACGTATGAGATTATATATTTGGATGAGGAGCAATCACCGcccagtaacaacaacattaacgaGGAGAACGATTTTGGTGAACAAATGCaagcagatgatgatgattatacTGTTGGTAGCAGCACCAGTAGCACCAGTCGCCAGTTGCCACCTGCTGTTGCACCCAATCCCAATCGCTACAAGTGCGTTGACTGCGGCTCCTTGTTCCCAACACAGGTGGCACTTAAAACGCATATTAGCGAGGAGCATGATTTTATGGATTCACAATACAGTGCCAAAAAGTTTGACAACGCCGAATCGACTGATGAGGCAGCGTCCTCTGCATCAGCTTCCACTCAAGTGCCAGTATCCAAAACATCACCAGCCACAAGTAGCAGTAAAAAGACATCACAAACCAATAGCTCTGGCTCATCGACAATAGAGCAAAACTATATATTCCTGTGCCCATCGTGTGGCAAGTCATACAAGACGCAGTTTGAGTGGCGTCGCCATATCAATGATGCCCACAACTTTGACAAGCGACAGTATTTGAATATGCGGCAACTGGATAAATATCGATACCAGTGTACTCAGTGCAAGGATGTTGTGAGCAGTTCTAAGCTAAAGGGTTTGCAGGATCACCACTTTCGTCATCTACCCTATCGACTGTATTTAAAGTGTCTCGTGTGCGGCACTTGCTACAATCACAAGCCCAACATTGCGGCACATCTGCGCACGCGTCACAATATCTATGAAAGGGATACGCCGTGGCGTGAGTTGCAGCCTAAGCCACAGTACAACTATGTGATTATGAAGGACAAGGAAAAAGAAAGGGGGGAATCTCGTGGCATATCCTCGCCATCAACATCACCGACACCCGGCAGCAGTAGTATTAATGTAGGACGCACTTTAAAACCGCAACCTGGTGTGCTGCCCACTCGACCAGCTGGTCTGAATACGTTGGAGGACAGCATTTCATATCATAATGCTGTAGATCTGGACTTTATCACGTACTATTGTCCCAAGTGCAACAAGAACTTTGATTCGCATGCCTTCTGGCGCAAACACATCGTGGAACACCATAATTACAATAGTCGCCAGGGTCTCAACTTTCGTCAAATCGATATGCATCACTATTTGTGCCTCGAGTGCTATAAGCGTGTAACTGTCACCCACACCAAGGGTGCCATAGGCCAGCTGCAGTCGCACAAGTTCCGACATTTGCCCTATCGCTCATTTAAATGCCTGACCTGCAATGGAGAATTTGTGCGAAAGCAAATGTTCTTTAAGCACTTGAATCGCGACACAAATCGTTGTGACAACAAACCTCTCAGTGCCCAGGATAACGACGATGATGTTGGGAATCAGCATGTGACAATTGCTTCCGTTCCTGCTATTGAGGATATTGATCCCGCTTCATATTGCTTTTGGTGTCCCCAATGTGGCGATAACTTTACAACCAGCAGCAAAGCCCTTTGGCGTGAACACATTAACATGCATCATGGCCTGGGCAAGCGGGATCATCTCCATATGCGAAAGCTCGGAGAGGAACTGTATCGCTGCACGGATTGCGACGAACAGTTGCAAACGAAGCAACTGCGAGTGCTGCAAGAACATCGTTTCAAACATTTACCCTATGCTGCCTATATACGCTGCCAGCTATGCGAGCATCAGCAGGATGAACTGGGTCAAGGAGCTGTGGCAGCTGGTCTGCACAGCATGCAAGAGTTGCAGCAACACATACGCGACAAGCATCCCGATGTGACCGACAATGAGGGACAAATACAATCACTAGTGAACGATGAAGGCAGTCAGCCAGCAAACAATGAATCGTCTGGTAATGGAAGATATATGCCACTTCCACCGCATTTGTTGGACGATGATGTAGATGACGTGGAGTTCGAGGAACAGTATCTGCTGGGTTAA
Protein Sequence: MEGMDLWTSMFSTDFEEGEGDGDVEGDSYNNNAQADDFMGEEEGEEEDQEGDIDEIDDDGEGDDSRRRQGKRKRHEPDDDAIFDFELEPIVNIAEPQPERRGTVALAPPMPSGPPVRGMHHRQSLPASFGSALMPRGSGGGTAPTRPTTSQINATDENGVPINYELGVIYICPACGAEYRQQDMWKRHMNQMHQYNTRKGLNFVAIDKLYHRCLECNKRIAMHSRENLLKHKFTHLPYRCTKCYICKREYKYRQDLMVHLRMVHCDEVVAMMREGDGTAGRKTRVREPRTEQHLTLQPPQIHDDDPDCLEVRNEQVETDGPAGTETNIGLDDDPNSLAKRKRSNPATGNGNGNSAADMCEDYIHYMCPDCGTDCDTHAQWSQHIEFVHDYVSRRGLNFRCVDMQMQCLECKQFVIPNTIKILRAHKFSHLPQPDWMRCKLCYRGYKEHHELVTHLLKHHHLETLMPDAEETEETMPSASAEDDAEENADNDNGNGNGNGNGCDDELLHWDEAPRRGGRISSDDMYEPHIDYLCPQCGREFIEKKHWRTHVVQVHGMNDLAKLNFEVINDRQLKCTECDKIITNAYGIQNAQQHRITHLPYKAYARCRKCHKSYTDRKGLVKHLATYHRVGYEPRKHSGGPGLSSGSGSGGISASGQSSKSQQPPPPRKQIVTVANETYEIIYLDEEQSPPSNNNINEENDFGEQMQADDDDYTVGSSTSSTSRQLPPAVAPNPNRYKCVDCGSLFPTQVALKTHISEEHDFMDSQYSAKKFDNAESTDEAASSASASTQVPVSKTSPATSSSKKTSQTNSSGSSTIEQNYIFLCPSCGKSYKTQFEWRRHINDAHNFDKRQYLNMRQLDKYRYQCTQCKDVVSSSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRTRHNIYERDTPWRELQPKPQYNYVIMKDKEKERGESRGISSPSTSPTPGSSSINVGRTLKPQPGVLPTRPAGLNTLEDSISYHNAVDLDFITYYCPKCNKNFDSHAFWRKHIVEHHNYNSRQGLNFRQIDMHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCNGEFVRKQMFFKHLNRDTNRCDNKPLSAQDNDDDVGNQHVTIASVPAIEDIDPASYCFWCPQCGDNFTTSSKALWREHINMHHGLGKRDHLHMRKLGEELYRCTDCDEQLQTKQLRVLQEHRFKHLPYAAYIRCQLCEHQQDELGQGAVAAGLHSMQELQQHIRDKHPDVTDNEGQIQSLVNDEGSQPANNESSGNGRYMPLPPHLLDDDVDDVEFEEQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00602113;
90% Identity: -
80% Identity: -