Dput006922.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila putrida
Gene Symbol
RREB1
Assembly
GCA_037043535.1
Location
JBAMBI010000365.1:1093165-1099497[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.036 2.4 8.8 0.8 1 21 228 248 228 250 0.93
2 13 0.00033 0.023 15.2 0.2 1 23 260 282 260 282 0.98
3 13 8e-05 0.0055 17.1 7.3 1 23 288 310 288 310 0.98
4 13 0.49 34 5.2 2.5 2 20 537 555 537 557 0.93
5 13 0.036 2.5 8.8 0.1 1 23 718 740 718 740 0.97
6 13 1.2e-05 0.00084 19.7 0.7 1 23 750 772 750 772 0.99
7 13 0.00082 0.057 13.9 2.0 1 23 778 801 778 801 0.97
8 13 0.0029 0.2 12.2 2.0 1 23 1083 1106 1083 1106 0.95
9 13 8.6e-05 0.0059 17.0 0.3 2 23 1437 1458 1436 1458 0.97
10 13 0.14 9.9 6.9 6.3 1 23 1464 1487 1464 1487 0.97
11 13 4.4 3.1e+02 2.2 3.6 1 23 1630 1653 1630 1653 0.79
12 13 0.0084 0.58 10.8 0.5 3 23 1712 1732 1710 1732 0.96
13 13 0.0013 0.091 13.3 4.8 1 23 1738 1760 1738 1760 0.99

Sequence Information

Coding Sequence
atGCTGgccacacaacagcaacagcaacaggcacacacaacagcaacaacagtaacaactgctgctgagacaacaacagcaacagtaacagcaacagttgctgagATAGATCGACAGCGTCGTGATTCGACAACGTCAGAATCATCTCTAGAGCATCTCGACTTGGGACGCACACCAAAGAagctcagcagcagcaacggagCGCCGCAGCCGACGTCGACGCCACacgagacgacgacgacaacagcgACGTCACGCAAGCGTAAactgagacaacaacaacaatcgcagcaacagcaacacttgcTCTCTGACGAAGATGAtgagcagcaacatcagcaacaacaacaacaacaacagcagcaacaattgttggaTCAGTCAACGCAGCGACCGCGTCACAAGCAGCGACGCAACGCCgcagttgctgccgctgccagcgccagcattgttgttgattaCAGCGCCAGCGGCGATTCGAGTTCTTTGCGTAAAAGTTTCCGCCAATGGCAGCTATTTGCTCAGCAGCGGTGCCGGCAGCAGCGCGCACAgtcagcagcagttgctgctgcacaacagcaacagtcggCGTCGAGCAGCAACTCGGGTGGCTCGTCGCCTCAGGGCTTGTGCCTCTCGAGTGCCGAATCGGGAATTGGCGCCGGCGAGGATCACATGAAATATTTGTGCCCCATCTGTGAGGTTGTCTCGGCCACGCCCCATGAGTTCACCAATCACATACGTTGTCACAATTATGCCAACGGTGACACGGAGAATTTCACCTGCCGCATCTGCTCGAAGGTGCTGTCATCGGCCTCATCACTAGACAGGCACGTGTTGGTGCACACGGGAGAGCGACCCTTCAATTGCCGTTATTGCCACTTGACATTCACAACGAACGGCAACATGCATCGTCACATGCGAACACAcaagcaacatcagcaacagtcgcagtcacagtcacagcagcaacaacaacagtcgcaATCGCagttacagcagcaacaacactcacagcagcaacagtcgccgtcacagcagcagcgacaacgacagcaacatgcaacggcagcaacaattgccgcACAGGTGACAGGAGGCAGATCCGAAAGTTACGAAAGTGATGCAAGTTGTTCGACGGATGTGTCGAGTGCCCAaagtcacagcagcagcagcaatcactccaacaacaacaacaacaataataataacaataacaacaaactgagcaacaacaacaacaacaacaacaatgaggaGGAGGATCAACCTGCCAGAAAACGACgccataaaattaatatcaacaataacaatattatggAAAAAGATGAGGATGaagagcaggaggaggaggaggaggagcaggaagATCACGATCAGAATGAGGATGCCTCGGATGTGGCGAGTGTGGATGGAGAGGAGGATGCCACACAAATGATAACGTCCACACCCGATGTGGCAACGCTGCTTGCCTCAGGTGGCACCACACCGAGTCAATCTCCTGCACCCCCGATGTTGCTCAGTTGTCCCGCCTGTACGGCGGATGATTTCGAATCGTTGCCAGCATTGTGCCAGCATCTGGATGCCCAGCATGCGGATATACCCGCCAAGTGTCGCGAATGCGAGGTAATCTTTGCCACACACCGCCAGCTGCAGACGCACAGTTGTCGTGGCATCACTGGACTGCAAATGTTGCCGCTGCTCGGCACAAGTTCGAGTCCCATACACAAGCACGAAGTGGAGgaagaggatgaggaggaggaggaaccCGAAGAGCTGGATATGGAAGAGGAAcgagagcagcaacaacaactgcagccaGCAACAACTGCTCAACAAACGGAACGTGATGACTTCTTTCAGCAGCTCTACCTCAAGGGCAAAGccacaaatgttgttgctgctccctCGTTGCCCTCACCCATTAAACATGAGATTGGGGAGCGTGGGGATTGTCGTCAGGATCTGGCAGACATTCAGAGTATACTCAATATGACCAGCTCCAGTTGCACCTCAAGTTTTCTGCGCAACTTTGAACAATCGGTAAATACTCCCTGCTCCAGCCAGTACAGTCTCGATGGCCGCGATGGCGATGAGGAGGCTCAGGATGCATTCACCAGTGAATTTCGAAGGATGAAATTACGTGGGGAATTCCCGTGTAAACTTTGTGTGGCTGTTTTCCCCAATTTACGTGCCCTCAAAGGACACAATCGGGTTCATCTGGCGGCTGTTGGTCCTGCTGGTCCCTTTCGCTGCAACATGTGTCCCTATGCGGTGTGTGACAAAGCTGCTCTCGTTCGTCACATGCGCACCCACAACGGGGATCGTCCCTATGAATGTGCTGTCTGCAATTATGCGTTCACCACCAAAGCGAATTGTGAGCGACATTTGAGGAATCGTCACGGGAAAACGAGTCGCGAGGAGGTGAAACGTGCCATTGTCTATCATCCGGCCGAGGATGCGAGCTGTGAGGATTCGAAATCGGGACAACGATTACAGGATTCGGATCTGGCCGAGTTAAGCTATCGTTCGATATCGCCACCAATTGCTAGTGTCGAGCCTGCGTCGCAGCTGAAGCACATGTTGCTGGCAGAGCCACCACAGACAGCAGTTGccccaacaacaccaacaccagcagcaacaacagctgtcaAGGCTGGTCCATTGAAGATTCAGGTGAAAAGCTTGGATCAATTGGTGGATAAACCATTGGCACCTGCCATGGATGTGTGCATGGATGTCTTGGATCTCAGCAAGAAGCCAACAGCAGCACAGGAGCTACAAgagcaacaccagcagcagcaacagcagcagcgtgAGCGAGAAAGGGAACATGAAAGGGAATTGCTGCtgtcacagcagcagcaggtgcaacagcagcagcagcaacaacttttcgGTGCTGGCGATGCTGCCACACAGTACATGCAACAGCTGTTCCGTAATCTCATGTTCCAACAATCGCCAGCATTTCCATTCTTTAGCTTTAtgccaccaacagcaacagctgccgaGAAGCCCACACAAGGCACACCGCCAACACTTGTCGGTGGCGGTGTTACtggtgcaactgcaacatcggGCGTTACGCCAGCAACTAGCGCTGCTTTGGGACTCCCAATGCCACTGCCACCCGGAGTCGGTGTCGGCGTGCCTGTTCCTGCGGGTGGACCCGTCAAAATGGTCATTAAGAATGGTGTTCTAATGccgaaacaaaagcaacgtcGCTATCGCACCGAGCGACCCTTTGCCTGTGAACATTGCTCGGCAAGATTTACACTGCGCTCCAATATGGAGCGTCATGTgaagcaacaacatccacaatTCTATGCCCAGCGGCAGCGCAGTGGCCACCATGTGATGCGTGGACGTGGTGCATCCTCAaatgcagcagctgccgccgcagcagcagcagcagccgctgccGCCGCAGCAGCAATGTCAAATCTAAGTCAGCAACAACACGGTCATCATGCACATCATGCTCACATCTCAGATCAAGTCAAGTATGCGATTCTGGCACAACAATTAAAGGCACGCAAGGATACGGACTTGTTGCAACAGGCATTGGCACATGGTTCCAGCAGTGTGGCTGGAAATCCTCTACTCCATTTTGGCTAcaagcaacacaacaacagcaatggcagTAATCCGAGCAATGGGCATCCTGTTGTCagtaatgatgatgatgagcccAAGTTGATCAtcgatgaggatgatgaggaggatgaGCTCGATGATGAGGAGGAAGAGCTGGATGAGCTGGACGAGGAACCAGAGCAACTGGAGGAGGAGCAACAGGAGCGAGAGCACgaacaggagcaacaggagcCACCACGCACTTCGACGCCCATTGAGGCGGCCAAAAAAGTGGCTGAAACCATACTGGAGCAAGCCATTAAAGCGGGCAAATCCACCGAGGTGGAGTCCAAGAAACTGTCCAACAAATCTccgacaccaacaccaactccgactccaacGGCCACCACAATGAAAACAATGATTGCCCAAGCGGAATCGGTGGCGAAATCTCTGAAAGAAGTTGCCAGCTCACCGTTCAAAGATGAATCTCAAGACCTGGTGCCAGTGTCGAAGCTCGTTGACAATGCCACCAGCAATCAAGTGTCCTTCAACAGTTACTTTCGTCCCAGCGATGTGGCCAATCATATGGAACAATCGGATGAGGAGGGTCTGGTTGCCTCCGGCAGTGCCAGTGAGAGCAACAATTCCGGCACCGAGGATgtgaccagcagcagcagcaatgaacccaaaaagaaatccgcttacAGTCTGGCGCCCAATCGGGTCAGTTGTCCGTACTGTCAACGCATGTTCCCCTGGAGCAGCAGCTTGAGGCGTCACATTTTGACGCACACGGGACAGAAACCCTTCAAATGTTCCCACTGCCCGTTGTTGTTCACCACGAAAAGCAATTGCGATCGTCATTTGTTAAGGAAGCATGGCAATGTGGAGAGTGCCATGTCCGTGTATGTGCCCACCGAGGATGTGAGTGAACCGATTCCCGTGCCCAAATCTGTCGAGGAAATCGAACTGGAGGAGCAGCGACGTCGCAAGGCCGAACAACTGGAAAGGGAACGGGAAAGGGAGCGCGAAAGGGAGAGGGAGCGAGAAAgggagcgagaaagagagcggGAATTGGAGCTGGAACGGGAGCGTCGTTTGTTGGTCCAGCAGGAGCGGGAACGTGAAcgggagcaacagcaacaacagcagctaatCCAACAACTTGCAGCTGCCgcacaaattgttgctgcctgcacagcaacagcagcaactggagCAACTGGCGCAacatcctcctcatcctcccCCGCCGCCTCCGCTGGTAGTCCACCGGCGAGTGAATCACAGGGTAGCGATCTACCCTATAAATGTCATCTATGTGAATATTCATTTGGAGAGCGGCTGCAATGCTTGGAGCatatcaaacaacaacatgctcATGAGTTTGCTTTGCTGCTGGCCAAGGGAGCCATCGAAACGGAcgagcaacagttgccaccaccaccaccagcagcagctgtagcTGCAGCCGCAACAGTTTCCGATGAGGAAACTGGACTTGCTTCACGTGCCGTCAAATATCCGGACTATAGCAACCGGAAAGTGATCTGTGCATTTTGTGTGCGTCGCTTTTGGTCCACCGAGGATTTGCGTCGTCACATGAGGACACATTCCGGAGAGCGTCCATTTCAATGTGAGATCTGTTTGAGGAAGTTCACATTGAAGCACAGCATGTTGAGGCACATGAAGAAGCACAGTGGACGCAGTCACAACGGGGATTTGGGTGGCCAGTCCGATTGTTCCGATGATGAGCAATCGGCCACGCCTCCCAGCAcacccacgcccacgcccatgATAATGCCCCaagcgaacaacaacaacaataataacaacaatacttgccacaacaacaacaacaataacaataatagtaaGCAAAGTTTGCGTTTGCCCAAGTTGCATGAACTGTTGGACAAGGCAAATGAATGGCGTGTGAGTCGCTTAGGGgaacataaagaaaacattgcCGAGACAGCAACACCatcggcagcaacagctgccgccgccgcagcagcagcagcagcggcagttGCAAGTGGCGATCTAATTGGAAATTTGCTTGGCATTAGCGATCAAGGTATCCTAAATAAGTTGCTATCCTCAGCCGATGAGGCAGCCAAGTTGCTAGGCGTTGACAAGTAA
Protein Sequence
MLATQQQQQQAHTTATTVTTAAETTTATVTATVAEIDRQRRDSTTSESSLEHLDLGRTPKKLSSSNGAPQPTSTPHETTTTTATSRKRKLRQQQQSQQQQHLLSDEDDEQQHQQQQQQQQQQQLLDQSTQRPRHKQRRNAAVAAAASASIVVDYSASGDSSSLRKSFRQWQLFAQQRCRQQRAQSAAVAAAQQQQSASSSNSGGSSPQGLCLSSAESGIGAGEDHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQQQSQSQSQQQQQQSQSQLQQQQHSQQQQSPSQQQRQRQQHATAATIAAQVTGGRSESYESDASCSTDVSSAQSHSSSSNHSNNNNNNNNNNNNKLSNNNNNNNNEEEDQPARKRRHKININNNNIMEKDEDEEQEEEEEEQEDHDQNEDASDVASVDGEEDATQMITSTPDVATLLASGGTTPSQSPAPPMLLSCPACTADDFESLPALCQHLDAQHADIPAKCRECEVIFATHRQLQTHSCRGITGLQMLPLLGTSSSPIHKHEVEEEDEEEEEPEELDMEEEREQQQQLQPATTAQQTERDDFFQQLYLKGKATNVVAAPSLPSPIKHEIGERGDCRQDLADIQSILNMTSSSCTSSFLRNFEQSVNTPCSSQYSLDGRDGDEEAQDAFTSEFRRMKLRGEFPCKLCVAVFPNLRALKGHNRVHLAAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIVYHPAEDASCEDSKSGQRLQDSDLAELSYRSISPPIASVEPASQLKHMLLAEPPQTAVAPTTPTPAATTAVKAGPLKIQVKSLDQLVDKPLAPAMDVCMDVLDLSKKPTAAQELQEQHQQQQQQQREREREHERELLLSQQQQVQQQQQQQLFGAGDAATQYMQQLFRNLMFQQSPAFPFFSFMPPTATAAEKPTQGTPPTLVGGGVTGATATSGVTPATSAALGLPMPLPPGVGVGVPVPAGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASSNAAAAAAAAAAAAAAAAAMSNLSQQQHGHHAHHAHISDQVKYAILAQQLKARKDTDLLQQALAHGSSSVAGNPLLHFGYKQHNNSNGSNPSNGHPVVSNDDDEPKLIIDEDDEEDELDDEEEELDELDEEPEQLEEEQQEREHEQEQQEPPRTSTPIEAAKKVAETILEQAIKAGKSTEVESKKLSNKSPTPTPTPTPTATTMKTMIAQAESVAKSLKEVASSPFKDESQDLVPVSKLVDNATSNQVSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSNEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRKAEQLERERERERERERERERERERERELELERERRLLVQQEREREREQQQQQQLIQQLAAAAQIVAACTATAATGATGATSSSSSPAASAGSPPASESQGSDLPYKCHLCEYSFGERLQCLEHIKQQHAHEFALLLAKGAIETDEQQLPPPPPAAAVAAAATVSDEETGLASRAVKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSGRSHNGDLGGQSDCSDDEQSATPPSTPTPTPMIMPQANNNNNNNNNTCHNNNNNNNNSKQSLRLPKLHELLDKANEWRVSRLGEHKENIAETATPSAATAAAAAAAAAAAVASGDLIGNLLGISDQGILNKLLSSADEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00608648;
90% Identity
-
80% Identity
-