Basic Information

Insect: Drosophila putrida
Gene Symbol: -
Assembly: GCA_037043535.1
Location: JBAMBI010000472.1:1099530-1103190[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.058 4 8.1 0.0 1 23 360 385 360 385 0.95

2 17 0.3 21 5.9 3.5 3 19 397 413 396 415 0.93

3 17 5.8 4e+02 1.8 3.0 2 17 428 443 427 454 0.75

4 17 0.0099 0.68 10.5 0.8 1 23 485 507 485 507 0.94

5 17 0.0007 0.048 14.2 1.8 1 23 515 538 515 538 0.96

6 17 0.00069 0.048 14.2 0.2 2 23 543 564 542 564 0.97

7 17 2.6 1.8e+02 2.9 0.1 1 20 572 591 572 593 0.88

8 17 0.00039 0.027 15.0 0.4 1 22 612 633 612 636 0.90

9 17 0.079 5.4 7.7 0.9 3 21 643 661 643 662 0.90

10 17 0.0071 0.49 11.0 1.0 1 23 681 706 681 706 0.96

11 17 0.012 0.81 10.3 1.4 2 23 722 744 721 744 0.93

12 17 0.0043 0.3 11.7 0.5 2 23 750 772 749 772 0.92

13 17 0.048 3.3 8.4 0.2 2 23 776 798 775 798 0.95

14 17 0.00014 0.0096 16.4 0.9 1 23 804 826 804 826 0.98

15 17 0.011 0.78 10.3 1.0 1 23 830 853 830 853 0.93

16 17 4.3e-05 0.003 17.9 0.8 1 23 859 882 859 882 0.97

17 17 0.0037 0.26 11.9 0.1 5 23 895 914 887 914 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.058	4	8.1	0.0	1	23	360	385	360	385	0.95
2	17	0.3	21	5.9	3.5	3	19	397	413	396	415	0.93
3	17	5.8	4e+02	1.8	3.0	2	17	428	443	427	454	0.75
4	17	0.0099	0.68	10.5	0.8	1	23	485	507	485	507	0.94
5	17	0.0007	0.048	14.2	1.8	1	23	515	538	515	538	0.96
6	17	0.00069	0.048	14.2	0.2	2	23	543	564	542	564	0.97
7	17	2.6	1.8e+02	2.9	0.1	1	20	572	591	572	593	0.88
8	17	0.00039	0.027	15.0	0.4	1	22	612	633	612	636	0.90
9	17	0.079	5.4	7.7	0.9	3	21	643	661	643	662	0.90
10	17	0.0071	0.49	11.0	1.0	1	23	681	706	681	706	0.96
11	17	0.012	0.81	10.3	1.4	2	23	722	744	721	744	0.93
12	17	0.0043	0.3	11.7	0.5	2	23	750	772	749	772	0.92
13	17	0.048	3.3	8.4	0.2	2	23	776	798	775	798	0.95
14	17	0.00014	0.0096	16.4	0.9	1	23	804	826	804	826	0.98
15	17	0.011	0.78	10.3	1.0	1	23	830	853	830	853	0.93
16	17	4.3e-05	0.003	17.9	0.8	1	23	859	882	859	882	0.97
17	17	0.0037	0.26	11.9	0.1	5	23	895	914	887	914	0.90

Sequence Information

Coding Sequence: ATGTTGTCGGAAAATtcgaaaacaaataaagaaacttCGCCTTGCTGCGTGCATTGCAAAGTGCACAATTCAAAACAGCCATTCCAGGAGATATTCGATGAAGTGGGCATTGAAATCGAGCTGCCTCAATTGCTGGCCAAGTATTTtcagataaatataaaacctGACCCACAGAAACAGCAGCTACTTTGTCAAGAGTGTGTCAAAACGTTAATTCGTTTCTTTGACATTGATGAACTGCAACGGGAACAGGATGCGGCAAATGCTGCTAAGCAGAAATCGAAACCGCAGGACAAAACTGAAGCGACACCTGCGAGTGTCGCTCCAAAAATTGAAACAAGGTCATCTAAAAAACAGACACCGCCAGCGAACCAAGCTAAAAGTGAACCTAAAAAATGTACTGCTACCATAAAGTTGCCCACAAAACCACCACCACCGGAGCCAGTTTCCATACGCATCACCAGAGGAAAATCTATGGCTGTGGCCTCCAAAAGTGCCCAGATCAAAGCCGAaccaaaaacaattgaaaaaccAAAAGGAAAACCTCGTAGATCCAAGGAAACTCGATCTGGGGAACAGGAGCAGATAAGTGATCTCTTACGGGATATTTTGGATGACGAGAAGGCGACACCCGACGACAAATTCGCCgaagcagctgcaactgtgcGTCAGTTGGAGGAAACTCAAGTTGCTGTGGAGGAAAAACAATTGCaggaagatgaagatgaaaaaCAACAGGAAAATCCTGATGAACTGGAGTATCTGCTCGAGCATGAAGAAGGTTCCTCTGACATGGATGTGCGTCACTTTAAAGTGGAGAAAACTACATCAATTGACACCTCACAAACGCAAAGCGAGGATGAATCCCTCAAAGTGGAGCCATTTAACTTTGTATTGATTAAGGAATCTGATGACATTGATGATCTGTATGAATATTTGGCCACTGTGGTGAAGACTTGCTTTGAGACCTTGACCTTTGATTGGGCCACCGTGTGTTGTCACTGCTCGTTGAAGTGCAGCAAATTTGAGACGCTGTTGTGGCACATGCAAAAGTGCCACAAGCTACCAGAGGAACGCTACAAGTGCCCGATTGAGGAGTGCAACGCGGAGTTGACCAATCGCAAAGCCTTGGCCATGCATCTGGTCGTGTTGCATGCCCCTGTGGCAGACATTCCCATTTATGGCTGTTGCCCCGAGTGCAACATGACCTTTTCGAATATCTTGCAATACAATAAACACTCCTGTGCCCGGGTCATCAAAAAGCGTCGTGGCATCCGCTTGTATTGCGAAATGTGCGGCTTGGAGTTCCCCTCCTGGAAGCGCTTCAACTTTCACAATCAGTTCCACTTGGAGAGGCACAGACCTCGTGCTTGCTTTGTGTGCAACTATGCCGACAACAACATAGATGAACTTTTCCAGCATTTGCATTATTCACACGAACCCGAAGGCACACACTTTTGTgatatCTGTGATCGCAATTTCCGTGATGCTGCTGTGTTTGCAGAGCATAATAAATCTCATACGAATGTTACCAATGCCACATATAGCTGCAACCATTGTCATGCCGTCTTTGAGACACGTGGACGTCTCAATGGTCACATACGCGCCTCTCATGGATCCGTCATAAGCTGTGAGCTGTGCAATAAGGAGTTTGCCACAGAGGCCACATACAACATCCACGTTAAGAAGCATCTGATCATTGAACTTGAGGTGCATGTGTGCAGCAATTGCGGACAACTCAGCGATAATCCTGATAAGATGGTGACTCACGTCGAGAATGCTACCTCGGATTGCTTTGGCGTTGAAGTCTATGTGGAACATCTTCGAGATGCCTATGTTTGTGAATATTGTTCGGCTTACTTTAAGCAGAAAACTGATTTGCGGGCTCATCGGGATTCGGGTGTACATAAGGATGGCAACTTTTGGTGTCAGCCGTGTGACAAGGGATTTAATGATATGAAACTATATCGTCATCATATGCGcaattatcaacaacaacgttcGGATGTTGATCATCGCAAACTAGAGATTTGTCTGTACTTTATGTGCGACTATGAGGATTGTTTCGAGTCGTACATCAATTGGAATTCTTTGTACACACACAAGCGACGCACTCACGATGCGGTCGACAAGCTGGAATCAAAGTCAAAGGTCAACGAATGGATTTGCCAGTTCTGTCAGAAGGTGTGTCGCTCCAAAATGTCGCTATCGGTCCATGTGGCACGCAGTCACAACAACAATAATGTTGTTTGCAAGCTCTGCAAGGCATCGTATAAGGATGAGGAGGCGTTGAAGAAGCATCACGCCTATTGGCATGAGCCCATGGAGTGTGCACTGTGCCTGAAAATAGTCAAGAATCGTCGCAACTTTGACACACATATGAATGTGGTTCATTCGAATAACAAACGTTATACCTGCAGTGTCTGCGAGAAGGGATTCTTTTACAAAAGCGAAATGGAGGCACACAAGCGgttgcattcACAATTGTTTAGCTGTGATCAATGCAGCTTTACCACAAGGAAAAAATCTTCACTGTCGGTTCATGTTCTTGGCCAGCATTTGAAGAGTTACGGCTTTGAGTGTAAGAGCTGCAATAGGAAATTTGGGCGTCCTCAGGGCTTAAAGAATCATATGCTGCGTGTTCATGGATCCAAGAATACGTGTCGTGATTTCTTTGAAGGCGGTTGCAGCAAATCTTTTGCCACAATCGCCCAACTAAACGTGCATGTGCGTAAAGCACATAATGGCAGTCTCTTTCAAACCGATGTTGACGAAGACGAACAGGAGAaccaggaggaggaggagcaggaacaggaacaggaacagcagGTTCAGGATCATAAACCAGCACAGGAACAAAAACCGAAGCTTGAGGTTCCAACAGCAGCATCCACATCGAAAAAACGTTGCATTCGCATCAGTGATGATACACAGATCGAGATTATTAATGCCGAGCCCGAAGAGGATAATAAGAGTACAGCGGACTCGGAGTtccaaaaaaccaaatgcaaaCCGCCAAacccaaaaagaagaagaaaacaacagatttaa
Protein Sequence: MLSENSKTNKETSPCCVHCKVHNSKQPFQEIFDEVGIEIELPQLLAKYFQINIKPDPQKQQLLCQECVKTLIRFFDIDELQREQDAANAAKQKSKPQDKTEATPASVAPKIETRSSKKQTPPANQAKSEPKKCTATIKLPTKPPPPEPVSIRITRGKSMAVASKSAQIKAEPKTIEKPKGKPRRSKETRSGEQEQISDLLRDILDDEKATPDDKFAEAAATVRQLEETQVAVEEKQLQEDEDEKQQENPDELEYLLEHEEGSSDMDVRHFKVEKTTSIDTSQTQSEDESLKVEPFNFVLIKESDDIDDLYEYLATVVKTCFETLTFDWATVCCHCSLKCSKFETLLWHMQKCHKLPEERYKCPIEECNAELTNRKALAMHLVVLHAPVADIPIYGCCPECNMTFSNILQYNKHSCARVIKKRRGIRLYCEMCGLEFPSWKRFNFHNQFHLERHRPRACFVCNYADNNIDELFQHLHYSHEPEGTHFCDICDRNFRDAAVFAEHNKSHTNVTNATYSCNHCHAVFETRGRLNGHIRASHGSVISCELCNKEFATEATYNIHVKKHLIIELEVHVCSNCGQLSDNPDKMVTHVENATSDCFGVEVYVEHLRDAYVCEYCSAYFKQKTDLRAHRDSGVHKDGNFWCQPCDKGFNDMKLYRHHMRNYQQQRSDVDHRKLEICLYFMCDYEDCFESYINWNSLYTHKRRTHDAVDKLESKSKVNEWICQFCQKVCRSKMSLSVHVARSHNNNNVVCKLCKASYKDEEALKKHHAYWHEPMECALCLKIVKNRRNFDTHMNVVHSNNKRYTCSVCEKGFFYKSEMEAHKRLHSQLFSCDQCSFTTRKKSSLSVHVLGQHLKSYGFECKSCNRKFGRPQGLKNHMLRVHGSKNTCRDFFEGGCSKSFATIAQLNVHVRKAHNGSLFQTDVDEDEQENQEEEEQEQEQEQQVQDHKPAQEQKPKLEVPTAASTSKKRCIRISDDTQIEIINAEPEEDNKSTADSEFQKTKCKPPNPKRRRKQQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00558138; iTF_00608656;
90% Identity: iTF_00558138;
80% Identity: -