Basic Information

Insect: Drosophila putrida
Gene Symbol: -
Assembly: GCA_037043535.1
Location: JBAMBI010000811.1:807143-811722[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0016 0.11 13.0 2.0 1 23 207 229 207 229 0.96

2 25 0.11 7.6 7.2 2.3 1 23 235 257 235 257 0.97

3 25 0.025 1.7 9.3 0.8 2 23 289 310 288 310 0.97

4 25 0.013 0.91 10.1 0.7 1 23 385 408 385 408 0.93

5 25 0.9 62 4.4 0.4 1 20 445 464 445 466 0.92

6 25 0.72 50 4.7 0.3 2 23 484 505 483 505 0.95

7 25 0.011 0.73 10.4 2.0 1 23 583 605 583 606 0.94

8 25 0.0087 0.6 10.7 0.2 1 22 615 636 615 636 0.95

9 25 0.034 2.4 8.8 5.1 1 23 645 668 645 668 0.95

10 25 5.6e-05 0.0038 17.6 0.3 2 23 695 716 694 716 0.97

11 25 8.3e-06 0.00057 20.2 3.5 1 23 724 746 724 746 0.98

12 25 0.0053 0.37 11.4 0.9 1 23 893 916 893 916 0.95

13 25 0.2 14 6.4 2.9 2 22 924 944 923 944 0.93

14 25 0.21 15 6.3 0.4 1 23 953 976 953 976 0.89

15 25 1.1e-05 0.00076 19.8 2.4 1 23 1001 1023 1001 1023 0.98

16 25 0.00014 0.0094 16.4 0.9 1 23 1030 1052 1030 1052 0.98

17 25 0.0049 0.34 11.5 0.1 2 20 1079 1097 1078 1099 0.93

18 25 0.012 0.85 10.2 3.9 1 23 1144 1167 1144 1167 0.96

19 25 0.051 3.5 8.3 0.4 1 23 1204 1227 1204 1227 0.96

20 25 0.00096 0.066 13.7 3.4 1 23 1250 1273 1250 1273 0.97

21 25 1.3e-05 0.00093 19.5 0.1 2 23 1300 1321 1299 1321 0.95

22 25 4.6e-05 0.0032 17.9 2.9 1 23 1327 1349 1327 1349 0.99

23 25 2.2e-06 0.00015 22.0 2.0 1 23 1355 1377 1355 1377 0.97

24 25 1.7e-07 1.1e-05 25.5 1.7 1 23 1383 1405 1383 1405 0.99

25 25 0.00072 0.05 14.1 0.3 1 22 1411 1432 1411 1435 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0016	0.11	13.0	2.0	1	23	207	229	207	229	0.96
2	25	0.11	7.6	7.2	2.3	1	23	235	257	235	257	0.97
3	25	0.025	1.7	9.3	0.8	2	23	289	310	288	310	0.97
4	25	0.013	0.91	10.1	0.7	1	23	385	408	385	408	0.93
5	25	0.9	62	4.4	0.4	1	20	445	464	445	466	0.92
6	25	0.72	50	4.7	0.3	2	23	484	505	483	505	0.95
7	25	0.011	0.73	10.4	2.0	1	23	583	605	583	606	0.94
8	25	0.0087	0.6	10.7	0.2	1	22	615	636	615	636	0.95
9	25	0.034	2.4	8.8	5.1	1	23	645	668	645	668	0.95
10	25	5.6e-05	0.0038	17.6	0.3	2	23	695	716	694	716	0.97
11	25	8.3e-06	0.00057	20.2	3.5	1	23	724	746	724	746	0.98
12	25	0.0053	0.37	11.4	0.9	1	23	893	916	893	916	0.95
13	25	0.2	14	6.4	2.9	2	22	924	944	923	944	0.93
14	25	0.21	15	6.3	0.4	1	23	953	976	953	976	0.89
15	25	1.1e-05	0.00076	19.8	2.4	1	23	1001	1023	1001	1023	0.98
16	25	0.00014	0.0094	16.4	0.9	1	23	1030	1052	1030	1052	0.98
17	25	0.0049	0.34	11.5	0.1	2	20	1079	1097	1078	1099	0.93
18	25	0.012	0.85	10.2	3.9	1	23	1144	1167	1144	1167	0.96
19	25	0.051	3.5	8.3	0.4	1	23	1204	1227	1204	1227	0.96
20	25	0.00096	0.066	13.7	3.4	1	23	1250	1273	1250	1273	0.97
21	25	1.3e-05	0.00093	19.5	0.1	2	23	1300	1321	1299	1321	0.95
22	25	4.6e-05	0.0032	17.9	2.9	1	23	1327	1349	1327	1349	0.99
23	25	2.2e-06	0.00015	22.0	2.0	1	23	1355	1377	1355	1377	0.97
24	25	1.7e-07	1.1e-05	25.5	1.7	1	23	1383	1405	1383	1405	0.99
25	25	0.00072	0.05	14.1	0.3	1	22	1411	1432	1411	1435	0.91

Sequence Information

Coding Sequence: ATGTTGCCGACTGATATATGCCGCACGTGTGCGCTACATGATGTAAATATGTTGGCGCTGTCGACGCGCAACGAGAAGCACGCGAACAAAAGTTTATGTGACATGTTGCATGAATTAACACAAAACGATCCTTTAATGGAACACTGTGATGATAATCTGCCACAGTATTTGTGTGGCGACTGCTTGCGTAAGCTGGAAGACGCCTATGCATTCGTGTTGCAAGCTCGACAGGTGCAAGAACAACTGTTGCACAAAATACGCAAGGGACTGCAGTGTCTGGAGGAAACACCTATAGACATAGCCACGCAGCAAATAAAGACTGAAGAAGACATTGCCTTGGAGTCAACCCAGGACCTGGATGAAGTTGCAACTGTGTCTGTGGAAGCCTTAAAGATGCAACCGGAGAGTGAGACAGATAGTAGCCAAGCCAACGTGGCCGACGAAGATGCAATAGACATAAAACCCAAACAGCTGAGACGCAGCCATCGCAAGGCAAAACTTGCCACAGACAGCGAAAATGAAGCAAGCTCTGAAATCTCAAATCCAGTGCCGCTCAAGCGTCGTCGCGGTCGTCCTGTGCGTATTCCCAAAAAGGAAACTATCAACCAGGATGGACGCCATGCCTGTGAGGTGTGTGGCAAGACGTTTTCGTGGCATCGCGACATGCAACGCCACGCTCGCGTACACTTTGAACAGGCTGGCTTCGTGTGTGACAGCTGTGGCAAGAGATTCCTTCGCAAGGACAAGTACATGTTCCATTTGCGATCACACGAGAAGCGCCAAGCCAAACAAGAGGCCCTCCAGCTGGGCAAAGAGTGGCGCTTTGCTGAGCGTCTCTACAGTTCAGGTCGCCTCAAGCGGATCGAGTGTAAATTATGCGGATTGAAGTGCCAGCGGATTCAGGAACTTCGTGAACATCTGGCTACTCATGTCAGTATTGAATCATTGTCGAATCTCAGCGCCAATAGCGATGTTATCATGGAACAGTTTGCCAGCCAACAGCTGGACTTGATGCAGATTAAGCAACAGGTGTGTGCAGACATAGCCAAGGGCAGTGAACGTCTGGATAAATACTGCGATGTGGTCAATGCTCATGGGTATGAGCTCTGCCTGAGCGACTCTGATGAAGAGCTAGCTGGAAAGTCTCCTCCATATCAATGCCTGCCTTGCAACACTTCCTTCTCACGCAAATATCTAATAATGCGACATACGCTGGAGGAGCACACTGAGACAACTTCTTGGCACCGTTGCGATCATTGCCAAATTGGATTTGTGTGTGAAAAACTGTTGGAACAACATCAACGCCACCAGTGTCACAATCCGTTGAAACGTTATAGTTGCCCCAACTGTCCAGGCAAATTTATTTGGATGCAGAATCTAAAGCGTCATGCGTGCTCCCAGCAATCTTCAGCGGCACATGATCAGGAGAGAATTCAAAGCCGCCAAATACAGTGCTGTCTTTGCGATGAGCAGCTGCCAAGTATGTCAGCATTGCGTGGTCATTTAGTAAAACATGGCGATGGACAAAGCGGCATTGATCCGGAAGGACATGCTACCTTCTTTCGCTGTAATTATCCTGATGGCTTTACCTGCAGTCCGTTGGAGCTGAGCACACGGATTGCGAGTGACTTTGATGCACAGGATTATGGAAGGTATTTCAATGCCTGCACAGGCAGCGGACAGGAGTTGGATTTCTTTGACTCTGATACGGATTTAAGCGATTCTTCAGCCTCAGCCTCGGCAGTGCATTCGTGTGCTTTGTGTGGCATGAACACAAAACGCCTTGCCCAACTCCTGTGGCATCAACAAAACCATCACAGTGAGGTGAAGGACACATTGCCACATGTGTGTAATAAGTGTGGACTAGGATTTGTGGCAGATTCGTTGCTTCAACAGCATCGCCGGCGCATCTGTAACAAGCGACATGCAAAATATCATTGTGAGCATTGTAATCTTCATTTTATCTGGCAATCCAACTACGAGCGGCATATGGAACTCCAGCATGAGACGGAGGCAGAAGATGTCGCTGAGAAGATGCCCCAAACCAGGCTAAGAAGCAAACGTCAACAAGCCGCCAAGCTACAGTGCAATGAGTGTGACAAGGTATTCATCTGGCCAAAGGATCTGACGCGTCACAAGCGCATCCATCAGCCGCAGGCATCGGCACAATTCGAATGCAGCTACTGCGATCGGAAGTTCCATCGCAAGGATGGCCTCAAGTCCCATCTGCGGGTGCATGGCGAGCAGCATTTGGACGTGACAATGATGTCCAATAACGATGTGACGGATTCTTCAATGTTGCAGCGGATGCCAATGGTGTTGACGCAATTGTGCCAACCAAATGGATGCAAGCAGATTCAATGCATGATCTGTCTCTCTCAGCACTCGAAGATCTCTGATCTGCGAACGCATTTAATGAAGCATCAGTTTGTTGTGGACTTTGCAGAGGATCGGGCCAAGCCGGAGAGCATTGCGAGTATTTCCCGAGATCTATATCCGGAACAGGAGACTCCACTGGATAAGCAACAATTGATTGAGCGCATCCAGAGTGATGTAGCTAATGGAATTGAGTTGGAAAGATTTATTTCGATAACCAACGAGGCGGGAATTGAGCTTAGTCTGGACAGCAGCGAAACTGACACGGATTCGGACTCACCCGAAGTGGAAGGCAGCCAATACAATTGCGATCTTTGCCAGTTGAAGCTGTCGCGTAAATATCAACTCTATGCACATCAGCTGGAGCAGCACACATGGCAGCAGGCAACCTGCATTTGTAGTCACTGTCAGGCGAGATTCATCAATGATCAATTGCTGGAGCATCACTATCGTTCGCTCTGCCGCAATGCCTACAAGCGATTCCTTTGTCGAAAGTGTCCATTACGCTTCCGCTGGCGTGAGAATCTTAAGTTGCACACGGGTGTGGCGCATCAAGATGGAACTGGAGAACAGGCAAGCCAAGGCATCCAATTGAATGGGGCAAGTCTGCTTCCTGTAATCAGCTATAATTGCACCGAATGTAATCGCAGCTTTAAGATGCAAAAGGATCTCACAAGACACACACTGATGCATGCCCGGGAGTCGAGCATTTATCGGTGTCGTTGGTGTGCCCGTCGCTTCTATCGCCAGGCTAATCTCCTGCAGCACATTGAGCGTCATGGCCTCAATGCCGCACAGCTGCCTTATGCCGAGTCCCTGCTCAATGCCAGCCGTCATCCACATGGCCAGAAGAGCATTCAATGCAAGGTGTGCAATATAAGTTTTCCCACAATTGCTACACTACGTTCCCATTTGACGTCGACGCCGAGTGGGACACATCATGATATTGGATCAATGCTCAACTATTCGATTACCAATCAAATGGGCTATGAGTTGCACTTGGATGACTCGGAAACGGATGAGGAGGCCAAGCCACCTGGGATTCCCACACACTACACCTGCGGCATGTGTCAACTGCGATGTGTGCGTAAATATGaactgcatcagcatcagcaggcCATGCATCGTTTGGAACGGATTACCGGACAGTGTGATCAGTGCATCTATAAGAGCGTCTCCCCTGATCTCATCGCCTATCATCAGCGTGTGCAATGTTGCAATACGGAGAAGCAATTCAAATGCGTTAATTGTGGCTTTAAGTTCATGTGGGAGTCGAATCTGTTGCTGCACATTCAGTTGCAGCATCCTGCCAATAATGATCAGGAGGAGGCGCATCCAGTAACCGAGCCATCGACAACAGAGCCCCAGATCTTTCAGTGCGGTCAATGTCCTCGCAAATACAATCGAAAGGATCGACTGAATGCCCATGTAAAAAAGTGTCATGCACCCGGTGGAGTTGGTCCAACTGCGAGTCCAAAGACCACGACACCTTCAACTGGTGCCAAGCAACAGAAGAGTTTCCTCTGCGCCTTCTGCGGCAAGGCGGTGAGCTCCTCCTCCAATCTCATTATACACATACGTCGTCATACTGGCGAGAAGCCCTTCAAGTGTGATTACTGCGACATGGCTTTTCCCCGCTCCTCCGATCTGCAGTGTCATCGACGCACTCACACTGGCGAACGTCCACATGTCTGCACCGTGTGCCAAAAGGGATTCGCCCGCTCCTATAAGCTGCAGCAACACATGCGCATTCATAATGGCGAACGTCCCTACAAGTGTACCTATTGTGACAAAGGCTTCACCCAGTCAAATGATCTGACCCTCCACATTCGACGTCACACTGGCGAGCGACCTTATCAGTGTGACACTTGCGGGGAACGCTTCATTCAGGGCACGGCACTGAAGAATCATAGGCAACAGAATGGTCATTTCGAGGCTGGGGATAGCCTGGCTAAAGATAACTAa
Protein Sequence: MLPTDICRTCALHDVNMLALSTRNEKHANKSLCDMLHELTQNDPLMEHCDDNLPQYLCGDCLRKLEDAYAFVLQARQVQEQLLHKIRKGLQCLEETPIDIATQQIKTEEDIALESTQDLDEVATVSVEALKMQPESETDSSQANVADEDAIDIKPKQLRRSHRKAKLATDSENEASSEISNPVPLKRRRGRPVRIPKKETINQDGRHACEVCGKTFSWHRDMQRHARVHFEQAGFVCDSCGKRFLRKDKYMFHLRSHEKRQAKQEALQLGKEWRFAERLYSSGRLKRIECKLCGLKCQRIQELREHLATHVSIESLSNLSANSDVIMEQFASQQLDLMQIKQQVCADIAKGSERLDKYCDVVNAHGYELCLSDSDEELAGKSPPYQCLPCNTSFSRKYLIMRHTLEEHTETTSWHRCDHCQIGFVCEKLLEQHQRHQCHNPLKRYSCPNCPGKFIWMQNLKRHACSQQSSAAHDQERIQSRQIQCCLCDEQLPSMSALRGHLVKHGDGQSGIDPEGHATFFRCNYPDGFTCSPLELSTRIASDFDAQDYGRYFNACTGSGQELDFFDSDTDLSDSSASASAVHSCALCGMNTKRLAQLLWHQQNHHSEVKDTLPHVCNKCGLGFVADSLLQQHRRRICNKRHAKYHCEHCNLHFIWQSNYERHMELQHETEAEDVAEKMPQTRLRSKRQQAAKLQCNECDKVFIWPKDLTRHKRIHQPQASAQFECSYCDRKFHRKDGLKSHLRVHGEQHLDVTMMSNNDVTDSSMLQRMPMVLTQLCQPNGCKQIQCMICLSQHSKISDLRTHLMKHQFVVDFAEDRAKPESIASISRDLYPEQETPLDKQQLIERIQSDVANGIELERFISITNEAGIELSLDSSETDTDSDSPEVEGSQYNCDLCQLKLSRKYQLYAHQLEQHTWQQATCICSHCQARFINDQLLEHHYRSLCRNAYKRFLCRKCPLRFRWRENLKLHTGVAHQDGTGEQASQGIQLNGASLLPVISYNCTECNRSFKMQKDLTRHTLMHARESSIYRCRWCARRFYRQANLLQHIERHGLNAAQLPYAESLLNASRHPHGQKSIQCKVCNISFPTIATLRSHLTSTPSGTHHDIGSMLNYSITNQMGYELHLDDSETDEEAKPPGIPTHYTCGMCQLRCVRKYELHQHQQAMHRLERITGQCDQCIYKSVSPDLIAYHQRVQCCNTEKQFKCVNCGFKFMWESNLLLHIQLQHPANNDQEEAHPVTEPSTTEPQIFQCGQCPRKYNRKDRLNAHVKKCHAPGGVGPTASPKTTTPSTGAKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDYCDMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHNGERPYKCTYCDKGFTQSNDLTLHIRRHTGERPYQCDTCGERFIQGTALKNHRQQNGHFEAGDSLAKDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00558059;
90% Identity: iTF_00558059; iTF_00608582;
80% Identity: -