Dpul000290.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila pullipes
Gene Symbol
RREB1
Assembly
GCA_035043795.1
Location
JAWNMT010000018.1:216594-223570[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.036 2.3 8.7 0.8 1 21 266 286 266 288 0.93
2 13 0.00034 0.021 15.1 0.2 1 23 298 320 298 320 0.98
3 13 0.00025 0.016 15.5 7.2 1 23 326 348 326 348 0.98
4 13 0.24 15 6.2 1.7 2 20 582 600 582 602 0.93
5 13 0.016 1 9.9 0.2 1 23 750 772 750 772 0.97
6 13 1.2e-05 0.00078 19.6 0.7 1 23 782 804 782 804 0.99
7 13 0.00083 0.053 13.9 2.0 1 23 810 833 810 833 0.97
8 13 0.003 0.19 12.1 2.0 1 23 1085 1108 1085 1108 0.95
9 13 8.7e-05 0.0055 17.0 0.3 2 23 1505 1526 1504 1526 0.97
10 13 0.15 9.2 6.8 6.3 1 23 1532 1555 1532 1555 0.97
11 13 9.4 5.9e+02 1.1 3.4 1 23 1673 1696 1673 1696 0.78
12 13 0.0085 0.53 10.7 0.5 3 23 1766 1786 1764 1786 0.96
13 13 0.0013 0.085 13.2 4.8 1 23 1792 1814 1792 1814 0.99

Sequence Information

Coding Sequence
ATGCTcgccacacagcagcagcagcaacaacaacaagaacaacagcaacaatcgcacacagcatcagcaactgcagcagcagcagcaacacatgAGGATGCTCGGGATTTGGGTTTAATGGAGACGCGACAACGTCGCGATTCGAGCACCTCAGAATCCTCGCTGGAGCATTTGGATTTGAGTCGCACGCCCAAaaagttgagcagcagcagcggcgcacCGCAGCCGACGTCGACGCCGCATGACACAGCAGTGACAGTGACGTCGCGCAAGCGCAAACTGCGacagcaacaccaccagcagcaacagttgccactcTCCGatgaggagcaacagcagcaacagcagcagcagcagcagctgctggatTCATCAGCGCAGCGACCGCGTCACAAGCAGCGACGCAGCgccgttgctgccgctgccagcgCCAGCATCGTTGTCGACTACAGCGCCAGCGGCGACGCCAGCTCGCTGCGCAAAAAGTTTCGGCTGAAtcgcagcagcgccagcagcaatgCCGCCAACGGTGATTTATCCGAATCGGGCTTCGTTGATGGCAGCGCCCTCAGTGGCTATCTgcttggcagcaacaacaacaacaacaacaataataataataacaacaacaacaatatcagtaatagtagcagcagcagcgcagtcgctcagtcagcagcagcagcagcgtcggcAGCGCAGCATGCGCCAAGCGTTAGCAGCTCGGGCGGCTCCTCGCCACAGGGCCTCTCGAGCGCCGAGTCGGGCATCGGTGCCGGTGATGAGCACATGAAATATCTGTGCCCCATTTGCGAGGTCGTCTCGGCCACGCCCCACGAATTCACCAATCACATTCGCTGCCACAACTACGCCAACGGCGACACCGAGAACTTCACCTGCCGCATCTGCTCCAAGGTGCTGTCGTCGGCATCCTCGCTGGACCGGCATGTCCTGGTGCACACTGGAGAGCGTCCGTTCAACTGTCGCTATTGCCACTTGAACTTCACAACCAATGGGAACATGCACCGACACATGCGCACCCACAAGCAACATCAggcgtcgcagcagcagcagcagcaacagcagcagcagtactcgcaacagcagcagtccacacaacagcagcaacaggcacagtcgcagcaacaacagcagcgacgccagcaacATGCAggtggagcaggagcagctggtTCGGTATCGGGATCAGCACAGTTGTTGACGACGCGAGCGGAGAGCTATGAGAGTGATGCCAGCTGCTCGACGGATGTGTCCAGTGAGCTGAAcagtcacagcagcaacagcaatcagtccaaccacaacaacaacaacaatagccacaaaacgaacaacaataataacaataacaataacaacaacaacaacaacaacaatgaggaTGAGCTCGAGCTGGAGGATGAGCAGCTAGTGCTGAGCAGCAAACAGCGACGCCACAAGGCAGccctaaacaacaacaatataattaGGGATGAGGAGCACGAGAATCGGCCGGATGATGATTCGGATGTAGACAGCGCTGATAGCGTTGCCCAGGTGATAACAAGCACACCGGATGTGGCCACGCTACTCGCCTCGGGCGGCACCTCGCCCACCCACTCGCATTCGGAATCGCATTcaccgccgctgctgctgcagagcTGCCCGGCCTGCAATTCGGGTGAATTTGAATCTGTGCCAGCGTTGTGCGCCCATCTGGATGCCGAGCATGCGGACATACCGGCCAAGTGTCGCGAGTGTGAGGTGATCTTTGCCACACATCGGCAGCTACAGGCGCACAGCTGTCGAGGACTGCCGCCGCTGCTTGGTGTGAGCTCATCGCCACTGCACAAGCAGGAGGAGAGCGAACTGGaggagcagcaccagcaacagcagcagcacgaggAGGAccacgagcagcagcagcacaagcaggaggaacaggagcaggctGAACAGCGCGAATGCGAAGATTTCTTCCAGCAGCTGTATCTGAAGAATAAATCGTCAGCAACGCTGCTTCCCTCACCGATCAAACATGAGCCGGCGGATCAGCGACAGGATCTGGCCGATATTCAAAGCATACTCAACATGACCAGTTCCAGCTGCACCTCGAGTTTCCTGCGCAATTTCGAGCAGTCGGTGAACACGCCCTGCTCCAGCCAATATAGCGTCGATGGACGCGATGGCGAGGAGGAGGCCCAGGATGCCTTCACCAATGAATTTCGTCGCATGAAACTGCGCGGTGAATTCCCCTGCAAGCTGTGCACCGCCGTCTTTCCCAATCTGCGGGCACTCAAGGGCCACAATCGCTACCATCTGTCGGAGGTGGGCGCCGCCGGTCCATTCCGTTGCAACATGTGTCCCTATGCCGTCTGCGACAAGGCGGCGCTCGTGCGGCACATGCGCACCCACAACGGTGATCGGCCCTATGAGTGCGCCGTCTGCAATTATGCGTTCACCACCAAGGCGAACTGTGAGCGACATTTGCGCAATCGACATGGCAAGACCAGTCGCGAGGATGTGAAACGTGCGATTGTCTATCATCCGGCCGAGGATGCCAGCTGCGAGGAGAACAAATCGCGGACCGAGGCTGATATCCTGACGGAGTTCAGCGGCTATCGTTGTGCAACACCCACGGAGCACAGCTCCTCGGCTAGCTCCTCGTCACAGCTGAAGCACATGTTGCTGGCGGAGCCGACGCCGTCCGTAAAGATTCAGGTGAAGAGCTTGGATCAGCTGGTGGATAAGCCACTGCCAGCACTCGATCTCAGCATGGATGCGCTCGACCTGAGCAGGAAGCCTGCCCAGCTGCTGGCCGAGCAAAGGGAGCAGCTCGAAAGACAcgaattgctgctgcagcagcagcaacagcagcagcaacaacaacagcagcaacagcagcagcagcagcaacaattgtttgGGGCTGGCGATGCAGCTGCTCAGTATATGCACCAGCTGTTCCGCAGCATCGTGTTCCAGCGATCACCTGGTTTTCCTTTCTTTGGTTTTATggcgccaccgccaccaacaacggcagcggcagtagcagcagcagcagcaacagcagcagacaagtcaatgacaacaaatacaacagcagcagcagtcggcgcaacagcagcagcaattgctgcaaTGCCACTGTCGCTGCCAGTGACACTGCCCGCTGGTGGTCCCGTCAAGATGGTCATCAAGAATGGCGTCCTGATgccaaagcagaagcagcgccGCTATCGCACCGAGCGTCCATTTGCCTGCGAGCATTGCTCGGCCCGCTTCACCCTGCGCTCCAACATGGAGCGGCAcgtgaagcagcagcatccacagtTCTATGCGCAGCGCCAGCGACACCGCAGCGGTCATCATGTGATGCGTGAACGGGCTGCATCCTCGAGTGCTGCCCAAGCGGCAGCCGCTGCtcaggcagcagcaatgagTAAtctcagccagcagcaacagttgcagcagcaacagcaacagttgcagcattcgcattcacatcaCGTCCATGCGCCAATCTCGGAGCAGGTGAAATATGCAATATTGGCGCAGCAATTGAAGGCGCGCAAGGATACCGATTTGTTGCAACAGGCACTGGCACATGGCTCCAGCAGTGTTGTCGCCAATCCGCTGTTGCATTttagctacaacaacaacaacggcaacggcaacggcagcagcatcagcagcagcaagcagcagcaacaacagttgtgCAACAACACTGGCAACTCTTTGGTGCTGGACGACGATGAGCCGCCCAAGCTGATCATTGACGAGGATGACGAGGATGTGGATGGCgaggacgatgaggatgaggaggaggagcaggaatttgatgttgatgaggaggagcaggaggatgAAGAGATGGACTTGGACGatgagcatcagcagcagccgcacgaggaggatgacgatgatgatattgatgatgatgatgcagcagcagcagcagcagcagcagcagcagcagcagcagcttctgcAGCAGAGGCGtcgcagcaacaattgcagccaaCCAAGGACAAGCTGCAATCCAAACCAATTGAGGCGGCCAAAAAGGTAGCGAAAACCATATTGGAGCAGGTAATCAAGGAGCGCGAGGAGAAAGCCGCCGAAAAGCAACCGCATCCTCAATCGGAGTCAATTGGCGGCAATAAGCCGGCGACGCCAACCACAATGAAAACGATGATTGCACAAGCTGAATCGGTGGCCAAGTCCTTGAAGGAGGTGGCCAGTTCACCGTTCAAGGATGAATCTCAGGATCTGGTGCCGGTCGCCAAACTGGTGGACAATGCGACCAGCAATCAGGTGTCGTTCAACAGCTATTTCCGTCCCAGCGACGTCGCCAATCACATGGAGCAGAGCGACGAGGAGGGTCTCGTTGCCAGCGGCAGCGCCAGCGAGAGCAACAATTCCGGCACCGAGGAtgtgaccagcagcagcagcagctgcggcaatGACACCAAAAAGAAATCCGCCTACAGCCTGGCACCGAACCGTGTCAGCTGCCCGTATTGCCAGCGCATGTTCCCCTGGAGCAGCTCGCTACGTCGCCACATCCTAACGCACACCGGCCAGAAGCCGTTCAAGTGCTCCCACTGCCCGCTGCTGTTTACCACAAAGAGCAACTGCGATCGCCATCTGTTGCGCAAGCATGGCAACGTTGAGTCCGCCATGTCCGTCTATGTGCCCACCGAGGATGTCAGCGAACCGATACCCGTGCCCAAGTCCGTCGAGGAGATTGAGCTCGAGGAGCAGCGACGTCGCCAGGCGGCCGAAGCCGAACAGGCCGAGCGTGAGCAGCGCGAGCGCCAAAAGGAGCGCGAACGTGAACTGGAATTGGAACGGGAACGTGAGCGGGAACACCAACAGTTGATACAACAGTTGCGCCAAcaaatggctgctgctgcagcggctgctgtcGCTGTGGCCGCCGTTGCTGCACCAGCGCATCCACCACCGCAAGACCAATCGCCACCAGGCCTGGAGGCGAGCAGTGATCTGCCCTACAAATGCCATCTGTGTGAGTTCTCATTCGGCGAGCGGCTGCAGTGCCTCGAGCACATCAAGCAGCTGCACGCCCACGAGTTCGccctgctgctggccaaggGAGCCATCGAAACGGATGCCCAGctgcagcaccaacagcagcagcagcagcagcagcagcagcagcagcaacaacagttgccagcGACTGGTGGTGCTCCGCATTCGGATGATGAGGCGGCTGCTGTCGGCACCAGATCGGGCAAATATCCCGACTATAGCAATCGTAAAGTGATTTGCGCATTTTGCGTGCGTCGCTTCTGGTCAACGGAGGATCTGCGGCGCCACATGCGCACCCACTCCGGTGAGCGGCCGTTCCAGTGCGAGATCTGCTTGAGGAAGTTCACATTGAAGCACAGCATGCTGCGACACATGAAGAAGCACAGTGGACGCAGTCACAATGGTGGCGAGCTCGATCATCAATCTGATTGCTCCGAAGATGAGCAACTGTTGCCCTGCTCCCCACCCTCAACGCCAACTcccactaacaacaacaacaacaacaacacttgccagaacaacaacaataataacaacaataacaacaacaatagcaatagcaagcAGGTGCTGCGCGAGCTGCTGGGCAAGGCGAACGAGTGGCGAGTGAGTCGCCTGGGTGAGCACAAGGAGAACATTGccgaggcaacaacaacaccctcagcaacagcagcagcggcagcaacagctgcagccgcaacagcagcagcagcagcagctgctgtagCCAGTGGCGATCTAATTGGTAATCTGTTGGGGATCAGTGATCAGGGCATACTAAACAAGCTGCTCTCCTCACCAGACGAAGCTGCCAAGCTGCTAGGCGTGGAGAAGTAA
Protein Sequence
MLATQQQQQQQQEQQQQSHTASATAAAAATHEDARDLGLMETRQRRDSSTSESSLEHLDLSRTPKKLSSSSGAPQPTSTPHDTAVTVTSRKRKLRQQHHQQQQLPLSDEEQQQQQQQQQQLLDSSAQRPRHKQRRSAVAAAASASIVVDYSASGDASSLRKKFRLNRSSASSNAANGDLSESGFVDGSALSGYLLGSNNNNNNNNNNNNNNNISNSSSSSAVAQSAAAAASAAQHAPSVSSSGGSSPQGLSSAESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLNFTTNGNMHRHMRTHKQHQASQQQQQQQQQQYSQQQQSTQQQQQAQSQQQQQRRQQHAGGAGAAGSVSGSAQLLTTRAESYESDASCSTDVSSELNSHSSNSNQSNHNNNNNSHKTNNNNNNNNNNNNNNNNEDELELEDEQLVLSSKQRRHKAALNNNNIIRDEEHENRPDDDSDVDSADSVAQVITSTPDVATLLASGGTSPTHSHSESHSPPLLLQSCPACNSGEFESVPALCAHLDAEHADIPAKCRECEVIFATHRQLQAHSCRGLPPLLGVSSSPLHKQEESELEEQHQQQQQHEEDHEQQQHKQEEQEQAEQRECEDFFQQLYLKNKSSATLLPSPIKHEPADQRQDLADIQSILNMTSSSCTSSFLRNFEQSVNTPCSSQYSVDGRDGEEEAQDAFTNEFRRMKLRGEFPCKLCTAVFPNLRALKGHNRYHLSEVGAAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREDVKRAIVYHPAEDASCEENKSRTEADILTEFSGYRCATPTEHSSSASSSSQLKHMLLAEPTPSVKIQVKSLDQLVDKPLPALDLSMDALDLSRKPAQLLAEQREQLERHELLLQQQQQQQQQQQQQQQQQQQQLFGAGDAAAQYMHQLFRSIVFQRSPGFPFFGFMAPPPPTTAAAVAAAAATAADKSMTTNTTAAAVGATAAAIAAMPLSLPVTLPAGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRHRSGHHVMRERAASSSAAQAAAAAQAAAMSNLSQQQQLQQQQQQLQHSHSHHVHAPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSVVANPLLHFSYNNNNGNGNGSSISSSKQQQQQLCNNTGNSLVLDDDEPPKLIIDEDDEDVDGEDDEDEEEEQEFDVDEEEQEDEEMDLDDEHQQQPHEEDDDDDIDDDDAAAAAAAAAAAAAASAAEASQQQLQPTKDKLQSKPIEAAKKVAKTILEQVIKEREEKAAEKQPHPQSESIGGNKPATPTTMKTMIAQAESVAKSLKEVASSPFKDESQDLVPVAKLVDNATSNQVSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSCGNDTKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQAAEAEQAEREQRERQKERERELELEREREREHQQLIQQLRQQMAAAAAAAVAVAAVAAPAHPPPQDQSPPGLEASSDLPYKCHLCEFSFGERLQCLEHIKQLHAHEFALLLAKGAIETDAQLQHQQQQQQQQQQQQQQQLPATGGAPHSDDEAAAVGTRSGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSGRSHNGGELDHQSDCSEDEQLLPCSPPSTPTPTNNNNNNNTCQNNNNNNNNNNNNSNSKQVLRELLGKANEWRVSRLGEHKENIAEATTTPSATAAAAATAAAATAAAAAAAVASGDLIGNLLGISDQGILNKLLSSPDEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00535518;
90% Identity
iTF_00525357;
80% Identity
-