Basic Information

Insect: Drosophila pseudotalamancana
Gene Symbol: stc
Assembly: GCA_037075185.1
Location: JBAMCK010000646.1:2304564-2308023[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.5 1.3e+04 -3.7 0.5 15 18 377 380 376 381 0.79

2 16 2 1.8e+04 -4.1 1.6 15 19 404 408 403 408 0.81

3 16 0.057 5.1e+02 0.8 2.0 4 11 437 444 436 445 0.90

4 16 2.3e-06 0.02 14.9 13.2 1 19 449 466 449 466 0.93

5 16 1.7 1.5e+04 -3.9 0.9 6 10 492 496 491 496 0.88

6 16 7e-08 0.00062 19.7 11.0 1 18 502 519 502 520 0.98

7 16 1.7 1.5e+04 -3.9 1.5 7 13 524 530 524 531 0.75

8 16 2e-09 1.8e-05 24.6 12.9 1 19 560 578 560 578 0.98

9 16 1.1 1e+04 -3.3 0.5 5 10 608 613 608 613 0.90

10 16 3e-05 0.27 11.3 16.9 4 19 626 641 619 641 0.88

11 16 0.06 5.3e+02 0.8 11.6 1 11 681 691 681 703 0.79

12 16 4.8e-10 4.3e-06 26.6 15.5 1 18 708 725 708 726 0.97

13 16 2 1.8e+04 -4.4 1.2 6 10 755 759 755 759 0.88

14 16 2 1.8e+04 -6.9 9.9 10 18 773 782 763 783 0.80

15 16 9.7e-09 8.6e-05 22.5 11.1 1 16 819 834 819 841 0.95

16 16 5.5e-07 0.0049 16.9 12.9 1 19 851 870 851 870 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.5	1.3e+04	-3.7	0.5	15	18	377	380	376	381	0.79
2	16	2	1.8e+04	-4.1	1.6	15	19	404	408	403	408	0.81
3	16	0.057	5.1e+02	0.8	2.0	4	11	437	444	436	445	0.90
4	16	2.3e-06	0.02	14.9	13.2	1	19	449	466	449	466	0.93
5	16	1.7	1.5e+04	-3.9	0.9	6	10	492	496	491	496	0.88
6	16	7e-08	0.00062	19.7	11.0	1	18	502	519	502	520	0.98
7	16	1.7	1.5e+04	-3.9	1.5	7	13	524	530	524	531	0.75
8	16	2e-09	1.8e-05	24.6	12.9	1	19	560	578	560	578	0.98
9	16	1.1	1e+04	-3.3	0.5	5	10	608	613	608	613	0.90
10	16	3e-05	0.27	11.3	16.9	4	19	626	641	619	641	0.88
11	16	0.06	5.3e+02	0.8	11.6	1	11	681	691	681	703	0.79
12	16	4.8e-10	4.3e-06	26.6	15.5	1	18	708	725	708	726	0.97
13	16	2	1.8e+04	-4.4	1.2	6	10	755	759	755	759	0.88
14	16	2	1.8e+04	-6.9	9.9	10	18	773	782	763	783	0.80
15	16	9.7e-09	8.6e-05	22.5	11.1	1	16	819	834	819	841	0.95
16	16	5.5e-07	0.0049	16.9	12.9	1	19	851	870	851	870	0.96

Sequence Information

Coding Sequence: ATGGCCGAGtattggcagcaacagcagcaacagcagcagcagcaccagcagcagcagcaacagcagcaacaacaacatcagcagcagcagcagttaacAAACGGAGCTGACTCAGCGTCTGCCTCGGGCTCCTCGGGCTCCTCGGCTACAACATctaacggcaacaacaacaattatgtgaactttaatcaatttatcaCGCAACACAATTTGGCCAGCTCCAGCGTGAACTATGGCAttggcggcggaggcggcgccTTCGGTCTAAcacccagcagcagcgccatcAACAACTCCTCCTCCAGCACCTTGTACACGCCACATGCGTATGCCTATCGAAACGGCGATGGCGCCGCAAGTTACAATCCAGTAGCGGCTGTTTACCCCAATCTCTATTCCCCGTTTGGGAACAATCCATTTGTTGGTTCTGCTCCTGGCGCTAGCTACGACTTCAGCACTTCCAAGTTGCAGGCCTCTGCACCTGAGTTTGTGCCTAATTTTGCCAAGCTCAGCCTGGCAGCCGCATCAGAGTCTGCATCACCAGCGGCGCCAGCTAAGAatcataataacaacaacaacactgccACACAGCCAAATGCAGCAGGAGGTGCGGGCAATTCAGGACAGCATTcgcaatcacaatcacaatcacaatcgcagttgcagtcgcagtcgcagccacaAAGAACCGATCACAGACAGCCCAAGCCGCATGGCAGTGGGAACAGCAGTCGCCAGCAGCGACGCAACGACTATCGTGAGGAGCGCAATGACGAGCGCTATGAACGTGGCAAGAAACCGCAGAAACATCAGCGCTACGACAATCATCGCAGCAATAAGCGACGCGATGattggaatcggaatcgggATCGCATAAATGGCTATCCACGCGCCGCCGAGGAGTTGGACACAAGCAACAGTAATGACAGCGCGCAGCCCTCTCCggagaaacaacaacaccagcagccactgcagcaacaacaacatcagcaacaaatCTCACCAAGACGCGCACCCGATAATGAGAAACTTTCCCAGCGCGAGAAACTAATGCGCGACATAGAACAACGGCGTCTCGAGTGCTTGGTTTGTGTGGAGCTGATTAAAGCGCATCATGGCACCTGGTCCTGCCAGAACTGTTATCATGTGTTGCATCTCAAGTGCACCATCACTTGGGCGAGCAGTTCGAAATCCGCAGAGGGTTGGCGTTGTCCGGCATGCCAGAACGTGCTGCAGGAGCTGCCGCGCGAATATCTTTGCTTCTGTGGCAAGTTAAAGAATCCACCGCTGACGCGCACCGAACTGGCTCACAGCTGCGGCGAGCTGTGCTGCCGTGTCGAGGGATGCAGTCATGCGTGCACGTTGCTCTGCCATCCGGGACCGTGTCCGGCGTGCCAGGCAAATGTCACTCGCAGCTGCGGTTGTGGGCGCACCTCGAAGCTAATGCAGTGCGCCATGAAGCAGCCGCTGCAGTGCGAAGCTATATGCGACAAGCTGCTCAACTGTGGTGAGCATCGCTGCCTGCAGACCTGCCATGCGGGGAAGTGTGAGGCGTGCGCGGATCATGTGCAGCAGAACTGCCATTGCGGCAAACAGCAGCGCGAGGTGCAGTGCACCCGTGAGAGCCAGGATAAACGCAACTACTCCTGCAAAGAGTGCTGCGGCAAGCCGCTGCCTTGCGGCAATCACAAGTGCAAGGATTCCTGCCATGCCGGCGCCTGCCGACCATGCAAGTTGAGTCCCACGCAAATCACGAGCTGCCCCTGCGGCAAGCTGCCCGTGCCGTCATCGCAACGCAGTAGCTGTCTGGATCCGGTGCCTACCTGCGAGGGAGTTTGCGGCAAAACGTTGCGTTGCGGTAAGCCTGCGCATCCCCATCAATGCGCCAACAAATGCCATCTGGGCCAGTGTCCACCTTGTCCTAAGCAAACGGCAGTGAAGTGCCGTTGCGGTCACATGGACCAGATGATTAAGTGCCGACAGTTGTCTACTCGGGCGGACGATGCGCGGTGCAAGCGACGATGCACCAAGAAGCGCAGCTGTGGAAAGCATAAGTGCAATGCCGAGTGCTGCATCGATATCGATCATGCCTGCCCGTTGCCCTGCAACCGCACGCTTAGCTGTGGCAAGCACAAGTGCGACCAGCCCTGCCATCGGGGCAACTGCCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTATTGTGAATGCGGTGCCGAGGTTATCTATCCGCCGGTGCCTTGCGGCACCAAGAAGCCTATCTGCAAGCGGCCCTGTTCGCGCACTCACGGCTGCGAGCATGCACCCCAGCACAATTGTCATGCGGCGTCCAGTTGCCCGCCGTGCATGATGTTCACCACTAAATGGTGCCACGGCAACCACGAACAGCGGAAAACTATACCTTGCTCTCAGGCTAGTTTCAGCTGTGGATTGGCCTGTGGCAAGCCGCTCGCCTGTGGGCGTCACAAATGCATACGGCCCTGCCATGAGGGAGACTGCCAGCAGGCGGGCGAATTGTGCCGTCAGAGTTGCATTAAACCTCGTCTGCTATGTGGCCACAAGTGTGCGGCCGTTTGCCATGAGGGCGTCTGTCCCGAAACGCCTTGCAAGGAGCTCGTCGAGGTGCAGTGCGATTGCGGCAATCGAAAGCAGAATCGCAGTTGTCAAGAGTTGGCTAGGGAGCACAGTCGGATTGCTACCGCACAGTTGGCCTCTTCCATGGCGGAGATGTCTCGCGGCAACTACATGGAACTCAGTGAAATACTTGCgcccaacaaaagcaataagtCTAATAAAACCTTGGATTGCAATGATGAGTGTCGTTTGTTGGAACGCAATCGTCGGTTGGCTATTGGGTTGCAGTCACGCAATCCGGATACGCAGCTTAAATCGCTGACTAAGTACACCGAATTCTTGCGCGGTTTTGCCAAACGTAATCCGGCTTTGACCAAGAGTGTCTATGAAACCCTAACCGATCTGGTCAAGCTAGCCAAGGAGAGCAAACAGAAGTCGAGAAGTCACTCATTTCCCACGATGAATCGGGAAAAGCGTCAGCTGGTGCATGAACTATGCGAAGTATTTGGCGTGGAGTCGGTCTCCTATGACAAGGAACCTAATCGAAATGTGGTTGCCACGGCGCACAAGGAACGCTGCTGGCTGCCAGCAACGAGTATCATGGAGGTGCTGGCAAGGGAATCTGGACAACGACGGGTGCCCGTGCCCAGCAACAATGCATGGAGCCTTAAGAAGTAG
Protein Sequence: MAEYWQQQQQQQQQHQQQQQQQQQQHQQQQQLTNGADSASASGSSGSSATTSNGNNNNYVNFNQFITQHNLASSSVNYGIGGGGGAFGLTPSSSAINNSSSSTLYTPHAYAYRNGDGAASYNPVAAVYPNLYSPFGNNPFVGSAPGASYDFSTSKLQASAPEFVPNFAKLSLAAASESASPAAPAKNHNNNNNTATQPNAAGGAGNSGQHSQSQSQSQSQLQSQSQPQRTDHRQPKPHGSGNSSRQQRRNDYREERNDERYERGKKPQKHQRYDNHRSNKRRDDWNRNRDRINGYPRAAEELDTSNSNDSAQPSPEKQQHQQPLQQQQHQQQISPRRAPDNEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPACQANVTRSCGCGRTSKLMQCAMKQPLQCEAICDKLLNCGEHRCLQTCHAGKCEACADHVQQNCHCGKQQREVQCTRESQDKRNYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPSSQRSSCLDPVPTCEGVCGKTLRCGKPAHPHQCANKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHAPQHNCHAASSCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLACGRHKCIRPCHEGDCQQAGELCRQSCIKPRLLCGHKCAAVCHEGVCPETPCKELVEVQCDCGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKSNKSNKTLDCNDECRLLERNRRLAIGLQSRNPDTQLKSLTKYTEFLRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: -
80% Identity: -