Basic Information

Insect: Drosophila pseudotalamancana
Gene Symbol: -
Assembly: GCA_037075185.1
Location: JBAMCK010000007.1:435356-437867[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.082 5.7 7.6 4.0 1 23 263 285 263 285 0.97

2 11 6e-06 0.00042 20.6 0.5 1 23 291 313 291 313 0.99

3 11 0.0002 0.014 15.8 2.5 1 23 319 342 319 342 0.97

4 11 0.36 25 5.6 3.8 1 20 348 367 348 370 0.95

5 11 0.0025 0.18 12.3 1.8 1 23 376 398 376 398 0.98

6 11 4e-05 0.0028 18.0 1.2 1 23 404 426 404 426 0.98

7 11 0.00013 0.0094 16.4 1.2 1 23 434 457 434 457 0.96

8 11 0.002 0.14 12.7 0.4 2 23 464 485 463 485 0.97

9 11 0.0018 0.13 12.8 1.2 1 23 491 513 491 513 0.98

10 11 1.8e-05 0.0012 19.1 0.7 1 23 519 542 519 542 0.96

11 11 5.2e-05 0.0037 17.6 3.6 1 23 556 578 556 578 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.082	5.7	7.6	4.0	1	23	263	285	263	285	0.97
2	11	6e-06	0.00042	20.6	0.5	1	23	291	313	291	313	0.99
3	11	0.0002	0.014	15.8	2.5	1	23	319	342	319	342	0.97
4	11	0.36	25	5.6	3.8	1	20	348	367	348	370	0.95
5	11	0.0025	0.18	12.3	1.8	1	23	376	398	376	398	0.98
6	11	4e-05	0.0028	18.0	1.2	1	23	404	426	404	426	0.98
7	11	0.00013	0.0094	16.4	1.2	1	23	434	457	434	457	0.96
8	11	0.002	0.14	12.7	0.4	2	23	464	485	463	485	0.97
9	11	0.0018	0.13	12.8	1.2	1	23	491	513	491	513	0.98
10	11	1.8e-05	0.0012	19.1	0.7	1	23	519	542	519	542	0.96
11	11	5.2e-05	0.0037	17.6	3.6	1	23	556	578	556	578	0.97

Sequence Information

Coding Sequence: ATGTCAAAACGCACGCGCGACTCCGATTCGGAGGACTTGCAGTcctttttaatgaattttcacAAGGAAATCGAGGAGGGCAGTGGTGATGTGAAAGATGCGAAGTCTGATGGCGTCGCGGTGGACGATGCTCctgaagaggaagaacaagaagaCAACCaggacgatgatgacgatgacaaaTACTTCATTGACGACGAAGGCAACTGCTATATCAAAACCACGCCAAGGAAACAAGAACAACTTAAAAAGAAACTTAAGCAACAAGCAACCTCAAAAGAGCCTCCACCAGAAGCAATTGCAATCCGAAGCACAACCCGTGCCGCCAGCAGCAAAACGTCCAAAGCAATTAATCTGCGTCCTGCCAAGCCAAAAACAGCTCCAGTGCCTCAAAGGACACCCAAAGCAATTAACATTCGGCCCGCTCCACCAAAAAGAACGCCAGCTAAGGCGACCTCTACGCCAGTTAACCCTCTTAGAGCATATTTACGCTCGTCGACCAAATCCGCAAAATCAGAACCGGAGTCGAAAATTGTGGAGTTCGAAGAGCTTGTGGATGATCCGAATGTCGTTGATGCAACTACCATTACCATTGATGAGTCAGAACTGAATACAAATGATGCAAATAATTCTACACCTGCGAGCAAAGCCAATTCGGATGACGAAGTTTACGAGTTTGATGACAATGCAGGCAATGCATCCGCCAAGTCGGATGTGGACTTTGTGCTCAGCGGTAATCAGTATAAGCTTAAACCGGTGGTAACCTACTCAGATGCATCGCAGAAATTCGCCTGCTCCCATTGCAGTTATACAACCAATAAGAAGTTTCTTATCTCACGTCACGTCCGCTCTCATGACTCGGAGCTGTCATTCAAGTGTTCCATCTGCGAGCGGGGCTTTAAGACTAACATGGCGCTTGTCAATcatttaaacacacacatgggtAACAGGCCGCACAAGTGTAAACTGTGCGAGAGCGCCTTCACGACTAGCGGGGAGCTCATACGTCATACACGCTACAAACACACCAAGGAAAAGCCGCACAAGTGTACTGAGTGTAGCTACGCCAGCGTGGAGTTAACAAAGCTGCGCCGCCATATGACTTGCCATACGGGCGAGCGTCCCTACCAATGTCCACACTGCACGTACGCATCGCAGGATATGTTTAAGCTAAAGCGTCATATGGTCATACATACGGGCGAGAAGAAGTATCAGTGCGATATATGCAAGTCTCGCTTTACCCAGTCCAACTCTCTGAAGGCACACAAACTTATTCACAGCGTGGTCGACAAGCCAGTATTTCAGTGTACCCTTTGTCCCACCACATGTGGACGCAAGGCTGACTTGCGCACCCACATGGCTAATATGCACACCTCGGATAAGCCACTTGTCTGCAAGCGTTGCGGCCAGGAGCTGCCCGATCGCTATCAATATAAACTTCACATAAAATCGCACGAGGGCGAGAAGTGCTATCGATGTAGTCTCTGTAGTTATGCTTCTGTATCTCAGCGACATTTGGACTCGCATATGCTTATTCACACTGATACGAAACCTTTTAAGTGCGACTTGTGTCCACAAGCATTCCGTCAGCGACAGTTACTACGTCGTCATGTAAATCTGATGCACAATGAGGACTATAAACCGCCGGAGCCGCGAGAAAAGGTTCACTCTTGCCCCAGCTGCATGCGTGTCTTCACGCACAAGGGCAACCTGATGCGCCATATGGAAACACACGATGATACACTGAATGCGCGCGAGGAGAAGCTTAAGCTTAAACTTGGACGTAGCGTCCGTCTGCAGCCGGACGGTAGTATTGTGACTATGGTCAATGGCACTGACATTGAGGCTCTTGGAAAGGGTGATGGCATTTCGATTGACATCGAAGAGCAGTACGAGCTCACTGAGCTTGAGGAAGTTGATGAAGAGGGGGAAGCGCCCACAGAAGTCATTGAGAAAACTTATACTTCACCCAACCTTAAAACaagaaatgcaaagaaaacGATGGTAATCAGAGAGTGCGAGCAGAGCTCGTCCAGTAAGCCAATCATTATAAATCGCCAATTGAGAGCTCCACGCGTGCATCGCGAACTTACTACTCAAGCCGGCACTTTCCGTATTAAGGAGGAGCCGGATGCTAACGAATTTACTGTAGAACTAGAAGGTGAAGATGAGCAGTTCATGGTTGTCCAGCTGGTCAATGACGATAGCGAAGTTGTGGTCAAGCGTGAGCCCAAGATCAATGCCAATAATTGTTTTGGCTTCGAGGATGATGACGCCAATGTTGAATACGAAGAGTATGTTGAGCCTGTAGCTGAAGTTGATGCCGCCACATCACAGCAGTTTCTGCAACTAATGGACATGATTGAGCAGGATACTTAG
Protein Sequence: MSKRTRDSDSEDLQSFLMNFHKEIEEGSGDVKDAKSDGVAVDDAPEEEEQEDNQDDDDDDKYFIDDEGNCYIKTTPRKQEQLKKKLKQQATSKEPPPEAIAIRSTTRAASSKTSKAINLRPAKPKTAPVPQRTPKAINIRPAPPKRTPAKATSTPVNPLRAYLRSSTKSAKSEPESKIVEFEELVDDPNVVDATTITIDESELNTNDANNSTPASKANSDDEVYEFDDNAGNASAKSDVDFVLSGNQYKLKPVVTYSDASQKFACSHCSYTTNKKFLISRHVRSHDSELSFKCSICERGFKTNMALVNHLNTHMGNRPHKCKLCESAFTTSGELIRHTRYKHTKEKPHKCTECSYASVELTKLRRHMTCHTGERPYQCPHCTYASQDMFKLKRHMVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVVDKPVFQCTLCPTTCGRKADLRTHMANMHTSDKPLVCKRCGQELPDRYQYKLHIKSHEGEKCYRCSLCSYASVSQRHLDSHMLIHTDTKPFKCDLCPQAFRQRQLLRRHVNLMHNEDYKPPEPREKVHSCPSCMRVFTHKGNLMRHMETHDDTLNAREEKLKLKLGRSVRLQPDGSIVTMVNGTDIEALGKGDGISIDIEEQYELTELEEVDEEGEAPTEVIEKTYTSPNLKTRNAKKTMVIRECEQSSSSKPIIINRQLRAPRVHRELTTQAGTFRIKEEPDANEFTVELEGEDEQFMVVQLVNDDSEVVVKREPKINANNCFGFEDDDANVEYEEYVEPVAEVDAATSQQFLQLMDMIEQDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00476798;
90% Identity: -
80% Identity: -