Dpse005284.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila pseudotakahashii
Gene Symbol
RREB1
Assembly
GCA_035046095.1
Location
JAWNOE010000105.1:9482608-9489238[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.035 3 8.8 0.8 1 21 233 253 233 255 0.93
2 13 0.00033 0.028 15.2 0.2 1 23 265 287 265 287 0.98
3 13 7.9e-05 0.0067 17.1 7.3 1 23 293 315 293 315 0.98
4 13 2 1.7e+02 3.2 3.7 2 19 525 542 525 544 0.97
5 13 0.0093 0.78 10.6 0.9 1 23 684 706 684 706 0.97
6 13 1.2e-05 0.001 19.7 0.7 1 23 716 738 716 738 0.99
7 13 0.00081 0.068 14.0 2.0 1 23 744 767 744 767 0.97
8 13 0.0029 0.24 12.2 2.0 1 23 1052 1075 1052 1075 0.95
9 13 8.4e-05 0.0071 17.0 0.3 2 23 1447 1468 1446 1468 0.97
10 13 0.14 12 6.9 6.3 1 23 1474 1497 1474 1497 0.97
11 13 7.6 6.4e+02 1.5 2.0 1 23 1615 1638 1615 1638 0.83
12 13 0.0082 0.69 10.8 0.5 3 23 1693 1713 1691 1713 0.96
13 13 0.0014 0.11 13.2 4.8 1 23 1719 1741 1719 1741 0.99

Sequence Information

Coding Sequence
ATGCTCGccgcacagcagcaacagcagcacaaGAACAGCacagcggaaacggaaatggagCGCCAGCGACGGGACTCCACCACATCGGAGTCATCCTTGGAGCACCTGGACCTGGGTCGCACGCCCAAGAAGCTGGGTGGCAGCGGTGGCTCCGCACATACCACATCCACGCCCCACGAACTCACAACGGTGACGTCGCGCAAGCGCAAACTTcgccagctgcagcagcatcaCCAGCAATTGAATCACCAGCAGCAGGACTTGCTGAGCgatgaggaggacgaggagcgCGACGAGCACGAGGATGAGGAGCCCAGGAATCTGGGGCGGCACAAGCAGCGACGCAGCACCCAGGCCTCCATTGTGGTGGACAACAGCGGTGGCGATGCCAGTTCGCTGCGCAAGAAGTTCCGACTCAATCGCTCGGCGGCCAGTCTCTCGGAATCGGGATTCGTGGACGCCAGCAGCACGGCACACAGTGGCTATCtgggcaacagcagcagtggcagtgccaccaacaacaacatgaCCACAGCCACCAGCGGTGCAGGAGCAGTGGTGGCTCCATCTGCGACTGGCGGTGGCGGtgcctccagcagcagcagcagcggcggatCCGGCGGCTCCTCACCGCAGGGAGGACTGTGCCTCTCCAGCGGCGAATCGGGCATAGGAGCCGGGGACGAGCACATGAAGTACCTGTGCCCCATCTGCGAGGTGGTCTCGGCCACGCCGCACGAGTTCACCAACCACATCCGGTGCCACAACTACGCCAACGGCGACACGGAGAACTTCACCTGCCGCATTTGCTCCAAGGTGCTATCCTCGGCCTCATCCCTGGACAGACACGTGCTGGTCCACACGGGCGAGCGGCCCTTTAACTGCCGCTACTGCCACCTGACCTTCACCACCAACGGCAACATGCACCGCCACATGCGCACCCACAAGCAGCACCAGGTGGTGCAGTCGCAACAGCAGCCGTCCCAgtcgcaacagcaacagtcgcagcagcagcaacgcagacagcagcaacatcagcagtcgcagcagcaacagaatcCCGCCCAGCAGCAACTGGTGGCCAACGCGTTGTCCGCTGGACGGGCGGAGAGCTACGAGAGCGATGCCAGCTGCTCCACGGATGTGTCCAGTGGCCATAGTCATAGCCATAGTCGCAGCAGTAGCTCCTtgaaccacaacaacaacaacaacaactcgcACAAGGCTAACAACAATCTGAAGGAGCTGGACGATGAGCTGGAGGTGGATCAACAGGAGAATAAGCAGCGCCGCCTGAAGACGAccatcaacaacaacattaTCGATCGGGAGGATCAGGAGGATCTGGATGAGGATGAGCAAGAGGAgcaagaggaggaggagaccGATGTGGCCATGTTGACCAGCACACCGGATGTGGCCACCCTGTTGGCCGGATCGCGTTCCCCCTCGCCCTCGCCCTCGGCCTCGCCCGTCCTGCTCCTGAGTTGCCCCGCCTGCGGAGCCTCCGACTTCGAGACGCTGCCCGCTCTCTGCGCCCACCTGGATGCCCGGCACTCGGATATTCCGGCCAAGTGCCGGGACTGCGAGGTGATCTTCGCCAGCCATCGCCAGCTGCAGGCCCATTGCTGTCGCGGCTCCTCCGGCCTGCTGCCGCCGCTCCTGGGGGCCAGCAGCTCGCCGCTGCATCATCAGGATGGGGACGAAAATGAGGatgaggagctggaggaggatgTGGACCGAAAGGAGCGAATGCCCAGCCAGAGCGAGGACTTCTTCCACCAGCTGTATCTGAAGCAGAAGTCCACTGCCGGAGCCATCTCGCATCCTCCCTCGCCCATCAAGCACGAGCCGGCGGACAGCAAGGATCTGGCCGACATCCAGAGCATCCTGAACATgaccagctccagctccagcttcCTGCGCAACTTCGAGCAGTCGGTGAACACGCCCAGCTCCAGTCAGTACAGCCTGGACGGCCGTgaccaggaggaggaggcccaGGATGCCTTCACCTCGGAGTTCCGTCGCATGAAGCTGCGCGGCGAGTTCCCCTGCAAGCTCTGCAGCTGTGTCTTTCCCAATCTGCGCGCCCTCAAGGGCCACAATCGGGTCCATCTGGGCGCCGTGGGTCCCGCCGGACCCTTCCGCTGCAACATGTGTCCCTATGCCGTCTGCGACAAGGCCGCCCTGGTGCGCCACATGCGCACCCACAACGGAGATCGACCCTACGAGTGCGCCGTCTGCAACTACGCCTTCACCACCAAGGCCAACTGCGAGCGCCACCTGAGGAACCGCCATGGGAAGACCTCGCGGGAGGAGGTGAAGCGGGCCATTGTCTATCATCCGGCGGAGGACGCCGGCTGCGAGGACAGCAAGTCACGGCTGGGCGAGGATCTGGCCGACCTGAGTTTCCGTTCCATCAGTCCGACGCCACCACCACCTTCGGTGGCTCCTCTGCCTCTGgagggcagcagcagctcccaGCTGAAGCACATGCTGATGGGTGAGCAGCATCATCATCCGGTGGCCCAGCCGCCGCTTAAGATCCAGGTGAAGAGCCTGGACCAGCTGGTGGACAAGAAACCGTCCGCGGCGGCAGCTCCTcccaagcagcagcagcaacagctggaGGTGGAGAAGTCTCCGCTGGACTTTAGCATGGATGTGCTGGATCTCAGCAAGAAGCCAACAACCGGTGGAGCAGCCTCCTCGGTCGCTCCCAATCCCACCACCACTACCGCTGCCCTGCCCACTGTGGTTCCTGGTGGTCTGCCCGGAAGTGGAACTCCCTCGGACCTGGCCGCCGCtttggagcagcagcagttgctgcTCGCCCAGCAGCCGCTCTTCGGCGCTGGCGGAGATGCCGCCTCCCAGTACATGCAGCAGCTGTTCCGCAGCCTGATGTTCCAGTCGCAGACCTCGGGCTTCCCCTTCTTCCCCTTCATGGCGCCCccgccgccgcagcagcagcaggtgaaTGCCGAGAAGGCACCGCTGGTGAGTCCACCAAGTCGTCTCAGCTCCCTCAATCCGATGCCCGTGGGCGTGGGTGTGCCAGTGCCACCCGGTGGCCCCGTCAAGATGGTCATCAAGAACGGAGTGCTGATGCCCAAGCAGAAGCAGCGACGCTACCGCACCGAGCGACCCTTCGCCTGCGAGCACTGCTCGGCGAGATTCACCCTGCGCTCGAACATGGAGCGCCACGTGAAGCAGCAGCACCCCCAGTTCTATGCCCAGCGCCAGCGGAGCGGCCACCATGTGATGAGGGGCAGGGGAGCCTCCAATgcggctgccgctgccgctgccgccgccgccgccgcagctgCCATGGGTCCAGGACCAGGATCCTCCTCCAACTCCAACCACCATCATGGCTCCCATGGACATGCTCCCATCTCGGAGCAGGTCAAATACGCCATTCTCGCCCAGCAACTGAAGGCCCACAAGAACACCGATCTGTTGCAGCAGGCCCTGGCCCACGGCTCCAGCAGTGTGGCCGGCAATCCCCTCCTGCACTTCGGCTACCCCCTGGCCACGCCCAGTCCGCTGCACAACGGGGCCATGGGCAATGGCCACCCCATTGCCATGGACGACGATGAGCCCAAGCTGATTAtcgatgaggatgaggatcaTGAggtggaggcggaggcggaggcggaggatgTGGATGACttcgaggaggacgaggacgaggaggaggagctggacgAGCCGGAAATGGAGGAGCCCGAGCTGATGATCCCGGCCGATGAGCAGCCAGCCGATGCCGAAGATGCGGAGGccgacgaggaggagcaggagctgccCAAGCCCCTGGAGCAGCTGTCGCCCTCCAACGAGGCGGCCCAGAAGATGGCCGAGACCATCCTCGAGCAGGCCATCAAGGCGGGCAAGCCATCGCCCAGTCCACAGCCGAGTCCGCAGGAGAAGGCCAGCCCAAAGGCGGTGGCCACGACCATGCAGGAGCCAGCCGCCGCCTCGCCACCCAGCAGTGCCAGCAATGCCAGCAGCCTGAAGACCATGATCGCCCAGGCCGAGTCCGTGGGCAAGTCCCTGAAGGAGGTGGCCAGTTCGCCGTTCAAGGACGAGTCCCAGGATCTGGTGCCGGTGGCCAAGCTGGTGGACAACGCCACCAGCCAGACGATGAGCTTCAACAGCTATTTCCGGCCCAGCGATGTGGCCAATCACATGGAGCAGAGCGACGAGGAGGGCCTGGTGGCCTCCGGCAGTGCCAGCGAGAGCAACAACAGCGGCACCGAGGACGTCACCTCCAGCAGCTCGGGCAGCGAGCCCAAGAAGAAGTCCGCCTATAGTCTGGCACCCAACCGGGTCTCCTGCCCCTACTGCCAGCGCATGTTCCCCTGGAGCAGCTCCCTGCGCCGGCACATCCTCACCCACACCGGGCAGAAGCCCTTCAAGTGCTCCCACTGCCCGCTGCTCTTCACCACCAAGAGCAACTGCGATCGCCATCTGTTGCGCAAGCACGGCAACGTGGAGTCCGCCATGTCGGTCTATGTGCCCACCGAGGATGTGAGTGAACCCATACCGGTGCCCAAGTCTGTGGAGGAGATcgagctggaggagcagcGCCGCCGGCAGGAGGCGGAGCGCGAGAAGGAGCGCGAGCTGGAGCGGGAGAGGGAGCtggagagagagcgagagttggagagggaaaGAGAgctggagaaggagaaggagcggGAGCGCCAGCAGCTCATCCAGAAGCTGGCGGCCCAAATGaatgccgctgccgccgccgccgctgccgcagGAGCTTCTGTCGGAgtagcaggaggagcagcagctgtcGATGCCCTGGCTGGCGGAGATCTGCCCTACAAGTGCCACCTGTGCGAGGGCTCCTTTGCGGAGCGTCTGCAGTGCCTGGAGCACATCAAGCAGGCCCATGCCCACGAGTTCGCCCTCCTCCTGGCCAAGGGCGCCATCGAGAACGAGTCGCTGGAGGCTGCCAATCCCcaccagctgcagcagcagcactccGACGACGAGGCACCCAACGGGAACGGAAGTCGCGGCAAATATCCCGACTACAGCAACCGCAAGGTGATCTGCGCCTTTTGCGTGCGCCGCTTCTGGTCCACCGAGGATCTGAGGCGCCACATGCGCACCCACTCGGGCGAGCGGCCCTTCCAGTGCGACATCTGCCTCCGTAAGTTCACCCTGAAGCACAGCATGCTGCGGCACATGAAGAAGCACAGCGGTCGGGCCCACAACGGGGACACCCCGGGATCCGATTGCTCCGACGATGAGCAGGCCATGAGCAGTCCACCGGGCACACCGGCTCCTGCTCCGGCTCCTCCTTCGGCTGCCCAGCCCccggccaacaacaacaatagctgccatgtgaacaacaacaacggcagcgcCAAGGGACTGGGCCTCAAGCTGCCCAAGCTCCACGAGCTCCTCGACAAGGCCAGCGAGTGGCGGGCCAGTCGCCTGGGCGAGCACAAGGAGAACATGGGCGAGGCGACGCCCTCGCCGGCAGCCGTCGCTGGCTCGGATCTGATTGGCAATCTGCTGGGCATCAGCGACCAGGGCATCCTCAACAAGCTCCTCTCCTCCGCCGACGAGGCGGCCAAGCTCCTGGGCGTGGACAACAAGTGA
Protein Sequence
MLAAQQQQQHKNSTAETEMERQRRDSTTSESSLEHLDLGRTPKKLGGSGGSAHTTSTPHELTTVTSRKRKLRQLQQHHQQLNHQQQDLLSDEEDEERDEHEDEEPRNLGRHKQRRSTQASIVVDNSGGDASSLRKKFRLNRSAASLSESGFVDASSTAHSGYLGNSSSGSATNNNMTTATSGAGAVVAPSATGGGGASSSSSSGGSGGSSPQGGLCLSSGESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQVVQSQQQPSQSQQQQSQQQQRRQQQHQQSQQQQNPAQQQLVANALSAGRAESYESDASCSTDVSSGHSHSHSRSSSSLNHNNNNNNSHKANNNLKELDDELEVDQQENKQRRLKTTINNNIIDREDQEDLDEDEQEEQEEEETDVAMLTSTPDVATLLAGSRSPSPSPSASPVLLLSCPACGASDFETLPALCAHLDARHSDIPAKCRDCEVIFASHRQLQAHCCRGSSGLLPPLLGASSSPLHHQDGDENEDEELEEDVDRKERMPSQSEDFFHQLYLKQKSTAGAISHPPSPIKHEPADSKDLADIQSILNMTSSSSSFLRNFEQSVNTPSSSQYSLDGRDQEEEAQDAFTSEFRRMKLRGEFPCKLCSCVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIVYHPAEDAGCEDSKSRLGEDLADLSFRSISPTPPPPSVAPLPLEGSSSSQLKHMLMGEQHHHPVAQPPLKIQVKSLDQLVDKKPSAAAAPPKQQQQQLEVEKSPLDFSMDVLDLSKKPTTGGAASSVAPNPTTTTAALPTVVPGGLPGSGTPSDLAAALEQQQLLLAQQPLFGAGGDAASQYMQQLFRSLMFQSQTSGFPFFPFMAPPPPQQQQVNAEKAPLVSPPSRLSSLNPMPVGVGVPVPPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASNAAAAAAAAAAAAAAMGPGPGSSSNSNHHHGSHGHAPISEQVKYAILAQQLKAHKNTDLLQQALAHGSSSVAGNPLLHFGYPLATPSPLHNGAMGNGHPIAMDDDEPKLIIDEDEDHEVEAEAEAEDVDDFEEDEDEEEELDEPEMEEPELMIPADEQPADAEDAEADEEEQELPKPLEQLSPSNEAAQKMAETILEQAIKAGKPSPSPQPSPQEKASPKAVATTMQEPAAASPPSSASNASSLKTMIAQAESVGKSLKEVASSPFKDESQDLVPVAKLVDNATSQTMSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSGSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQEAEREKERELERERELERERELERERELEKEKERERQQLIQKLAAQMNAAAAAAAAAGASVGVAGGAAAVDALAGGDLPYKCHLCEGSFAERLQCLEHIKQAHAHEFALLLAKGAIENESLEAANPHQLQQQHSDDEAPNGNGSRGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGRAHNGDTPGSDCSDDEQAMSSPPGTPAPAPAPPSAAQPPANNNNSCHVNNNNGSAKGLGLKLPKLHELLDKASEWRASRLGEHKENMGEATPSPAAVAGSDLIGNLLGISDQGILNKLLSSADEAAKLLGVDNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00605068;
90% Identity
iTF_00536996;
80% Identity
-