Basic Information

Insect: Drosophila pseudoobscura
Gene Symbol: srp
Assembly: GCA_009870125.2
Location: CM020868.1:27062240-27072206[-]

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 2.9e-17 7.3e-14 51.2 3.3 1 34 759 791 759 793 0.97

2 2 3.4e-18 8.5e-15 54.2 2.7 1 35 882 915 882 916 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	2.9e-17	7.3e-14	51.2	3.3	1	34	759	791	759	793	0.97
2	2	3.4e-18	8.5e-15	54.2	2.7	1	35	882	915	882	916	0.97

Sequence Information

Coding Sequence: ATGACCAAGATCACGAAGCCCAAGGACAAGGAGAAGGCACCGCCAACGCCGGCGCGTGCTTCTACCAATTTGCTGGCTAATGCGGCCAAAATGAAGATCACTAAAGCCCTGGCCAATGCCAagacgcagcagcagaacaagCAAGGACGTGCATCAACggcaacaaaagaaacaaaagagacagcagcaacaggatcaaatgcaacaacaacaacaacaactgcagtCGTACCAGCCGCAGCACTGAAAGAGACGGCTATAGCAGCTGTTCCGACCGAAACGGAGCCTACGACAGCGGccgagacagagacggagacggtggccgccgccgccgacgacgacgacaatgaGGCAGcgacgacgtcgacgtcggCCACAAATTTATCGTCATTTGAGTCCGCGCGTTTGCAGGCTCACACTTCAGTTGCAGCGAAACTCACAAACGAAACGGTTACCACCAGCGACACGgcgacagccacagcgacTACTGCAGTTCTAGCACTAGAATCAACAGCATCAGCTACAGCAGTTACAGTGGAGATCGAGAGAGATCCTAATCGTGTAAACAACGGTACTCAAGAGAGCAACGCGAGTGAAAGTGTCGATAATAAGATCAAAGTAATAAACTAtgcgcatcagcagcagcaacaaatctacgaacatcaacagcagcagcaacaacaacaacaacaacaccaggaACAGTTTCTCAGTCAGCAATTGATACAAGAACAACAGCACCaggagcaactgcagcagcaggaacagcattGGTTGGCCTACGATTTGACCAGcggatcagcagcagcggccgcagcagcagcggcggtgcAAGCAGTCCAAGCAGTGGATCAGAAACCCCCCGATTTGTATGCCTTGGCGGCCTCGCATCATCATTTCTTCGGACACCTGAGCTACCCGCCACCGCATCCACCCGCACAGCTGTACGAGCACTACCAGAGCATCACCGGCGCCAGCACGGATCCATCCATAATGAGGAATAACTTTGCGCTGTACAGCGTCTATggcgggggaggaggaggatcggccggaggagtaggagcgggagGAATGCTCACGCACGATCATGTGgtggcagccgccgcagcggcagcaaatgCCCACAATACGCCCAACATTGATGAGGTCATCCAGGACACACTGAAGGACGAGTGCTTCGACGACGGGCATAGCACCAGCTATCACATGCTGACCTCCGTATCAGATTTGCATTCCCTAAAGGATCCCAGTCCCACCATTTACTCACTGacgcaccagcaacagcagcaacagttgcagcagcaattgtaccaccaccaacagcagcagcaacaacaacagcagcagcaacacctccagcagcagcagcagcaacaccaacaacagcatcaCCATCACAACAACTCCGCCAGTTCGGTCGGCGGGGATTCCCCATCGTCCTCCTCGCATGCACTGTCCACGCTCCAGAGCTTCACGCAGCTGACGAGCgccggccacagggacagcCTTTCGCCGGAACAGCATGGGGGCTACTTCAGTCCCAGCCTGCAGACAACCAGTTCGGTGTACGCTGGACCCCTGCTCACCCAAGCGGCCAATGGGATGCAGTATGGCATGCAGTCGCCCAGCCACGCCCATGCGcatctccagcagcaacagcagcatccccaccagcagcagcaacatccccaccagcagcacaatccccaccagcaacagcagcagcagcagctccatcaGCATCACaattccagcagcagcagtccggGACCCGTGGGTCTGGCCTCTGGAACGACTGTCAATGGCAGTGGGCTCCTGGACGACGGCTATGGCTCGCCAAAGAGCAGccacagcggcggcggcggcggtggcagtggaGGTGGCACCTTGCCTGCCTTTCAGCGCATTGCATCGGCGACCAGCGGCTACGGCAACGGCGTGGCCAATGGCTCTTCGGTGGTCAGTGGAGCCGAACGGTCCGCTGGCTATGCATCGCTGGCCAATTATCGCACTCAGAGCGATGCCTGGACGGGTCATTACGAGCCAATCAGTTACGCAGCAGCCACCGCATCCGGTGTCCAGACACAGCTTGGAGGCGGCCTTGGTGGGGCCGGGGTGATACGCAACGGACGAGAGATATATGCCgcgaatgcagcagcagcggcggcggtaGATGGCGCCGCAGGACGAGTGGATCCAGGATCCTATCTAACAGCATCCGCATCGTTGTCAGCAACATTTTTCGATGCCGATTATTTCACTGAGGGGCGAGAGTGCGTCAATTGTGGTGCGATCCAGACACCGCTGTGGCGACGCGATAACACGGGACACTATCTGTGCAACGCCTGCGGCTTGTACATGAAAATGAACGGCATGAATCTGGCCGCTGAATCGGGCGGGGATTTCTATAAGAGCTACCCATTTAATGTGAACGCCAGCGGCAGTGGCCGTAGTAAGGCCAACACCCCAACAGCCGCGGGCACAGTCAtagccactgctgctgcaactgctgttGCGGCGGGGGCAACGGCAGCCCCAGCGACAGCTTCGACGGCAGCGGTAAATGCAACAACGACGCTTGAAGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGTGCCTCGAAGCGCAATGGCCTGTCGTGCAGCAATTGCCTCACCACCTACACATCTTTGTGGCGCCGCAATCCTGCCGGAGAGCCTGTGTGCAATGCCTGCGGGCTGTACTTTAAGCTGCACAGCGTCACGCGTCCGTTGGCCATGAAAAAGGATACCATTCAGAAACGCAAACGTAAACCCAAGGGAACGAAGAGTGAAAAGTccaagaaaatgaaaatggcacTGAATGCCAATATAGAGGGAGGTTCAGGCAATGGTGCAGGGTCTGCAGGCTCTGGCTCCCACAATGTGGGCCTGAGCTTGGACGTCAACGAAGATATGAAACCATACATGCCATACACCACAACCACATCGcaacaccaccagcagcagcagcaacagcagcaatcacagcaacagcagcagcatcatcatcagctcATTGctgatcagcagcagcattcatCGGCTGCCAGTTCGCCTCATAGCATGGCCTCCTCCTCACTATCCCCCTCAGCCACATCACATTCCCATTCgcatcaacaacagcagcagcaacagcatcagttGTGCTCTGGCCTGGACATGTCGCCCACGTCGCCCTATCAAATGTCCCCCATcaacatgcagcagcagcaacattcatcccatcagcaacagcagcaatccTGCAGCATGCAACAGCATTCGCCCAGCACTCCCACCTCCAGCACGGCCTCTATTTACAATACACCATCGCCCACCCACCACCATCAACACAGTATccataataacaataacaataacaatagcACATtgttcaacaacaacaacaacaacaacagtagcaATGAGAATAACACGAAAATTATACAGAAATATCTGCAAGCTCAACAATTGAGCgcgaacagcaacaacagcaacagcaacagcgggagcgggagctcGGATCATCATCTATTGGCGCACCTGAATGCGAACTCCATTACGACGGCAACACttgcagcagcggctgcagcgaCGATCAAACCAGAGGCCACATcgtccacagccacagccacagtgaCGGGATCAACACCGACCACGGCATCGAGCACATTATCCTCACTGAGcctcagcaacagcaacattatCAGTCTGCAAAATCCCTATCAACAGCTGGGGCTTGGACCGCAGGCGATGGCATTGTCTAAGCCAGGAGGACGCGCCGCCTCCCCGCTCTACTATATCACGGAGGATGAGCAGCACATCAAACTGGAGCAGATAGaacatcagcatcatcagGAGCACCAGCACTCCCATCAACAGCATCAGGGAGAGCTAATGCTCAGCCGATCGGGCTCGCTGGACGAGCACTACGAACTAGCGGCctttcagctgcagcagcaagagcTCCGTCTTCAGCAGAGTCTGCTCCACGAGCAGCAGGTGGCCAGCTATGCCATGCAAGCAAAGCAACTGCAGGAGCTGGAACGCAAGTACGGCGTGGATCGGGAGACTGTGGTGAAGATGGAGTAG
Protein Sequence: MTKITKPKDKEKAPPTPARASTNLLANAAKMKITKALANAKTQQQNKQGRASTATKETKETAATGSNATTTTTTAVVPAAALKETAIAAVPTETEPTTAAETETETVAAAADDDDNEAATTSTSATNLSSFESARLQAHTSVAAKLTNETVTTSDTATATATTAVLALESTASATAVTVEIERDPNRVNNGTQESNASESVDNKIKVINYAHQQQQQIYEHQQQQQQQQQQHQEQFLSQQLIQEQQHQEQLQQQEQHWLAYDLTSGSAAAAAAAAAVQAVQAVDQKPPDLYALAASHHHFFGHLSYPPPHPPAQLYEHYQSITGASTDPSIMRNNFALYSVYGGGGGGSAGGVGAGGMLTHDHVVAAAAAAANAHNTPNIDEVIQDTLKDECFDDGHSTSYHMLTSVSDLHSLKDPSPTIYSLTHQQQQQQLQQQLYHHQQQQQQQQQQQHLQQQQQQHQQQHHHHNNSASSVGGDSPSSSSHALSTLQSFTQLTSAGHRDSLSPEQHGGYFSPSLQTTSSVYAGPLLTQAANGMQYGMQSPSHAHAHLQQQQQHPHQQQQHPHQQHNPHQQQQQQQLHQHHNSSSSSPGPVGLASGTTVNGSGLLDDGYGSPKSSHSGGGGGGSGGGTLPAFQRIASATSGYGNGVANGSSVVSGAERSAGYASLANYRTQSDAWTGHYEPISYAAATASGVQTQLGGGLGGAGVIRNGREIYAANAAAAAAVDGAAGRVDPGSYLTASASLSATFFDADYFTEGRECVNCGAIQTPLWRRDNTGHYLCNACGLYMKMNGMNLAAESGGDFYKSYPFNVNASGSGRSKANTPTAAGTVIATAAATAVAAGATAAPATASTAAVNATTTLEEHVSRANSRRLSASKRNGLSCSNCLTTYTSLWRRNPAGEPVCNACGLYFKLHSVTRPLAMKKDTIQKRKRKPKGTKSEKSKKMKMALNANIEGGSGNGAGSAGSGSHNVGLSLDVNEDMKPYMPYTTTTSQHHQQQQQQQQSQQQQQHHHQLIADQQQHSSAASSPHSMASSSLSPSATSHSHSHQQQQQQQHQLCSGLDMSPTSPYQMSPINMQQQQHSSHQQQQQSCSMQQHSPSTPTSSTASIYNTPSPTHHHQHSIHNNNNNNNSTLFNNNNNNNSSNENNTKIIQKYLQAQQLSANSNNSNSNSGSGSSDHHLLAHLNANSITTATLAAAAAATIKPEATSSTATATVTGSTPTTASSTLSSLSLSNSNIISLQNPYQQLGLGPQAMALSKPGGRAASPLYYITEDEQHIKLEQIEHQHHQEHQHSHQQHQGELMLSRSGSLDEHYELAAFQLQQQELRLQQSLLHEQQVASYAMQAKQLQELERKYGVDRETVVKME*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00536426;
90% Identity: iTF_00518106;
80% Identity: -