Dhel014097.3
Basic Information
- Insect
- Drosophila helvetica
- Gene Symbol
- srp
- Assembly
- GCA_963969585.1
- Location
- OZ018403.1:7008358-7018654[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-17 9e-14 51.2 3.3 1 34 773 805 773 807 0.97 2 2 3.7e-18 1.1e-14 54.1 3.4 1 35 894 927 894 928 0.97
Sequence Information
- Coding Sequence
- ATGACCAAGACCACGAAGCCCAAGGACAAGGAGAAGGCGACGCCAACGCCGGCGCGTGCTTCCACCAATTTGCTGGCAAATGCGGCCAAAATGAAGATCACCAAAGCCCTGGCCAATGCCAAGACTCAGCAGCAGAACAAGCAAGGAcgtgcagcaccagcaacaaaagaaacaaaagaaccaacagcaacaggatcaaatgcaacaacaacaactgcagcCATGCCAGCCACAGCAGAGGCAGTGAAAGAGACGGCTATAGCAGCTGTTGCGACCGAAACGGAGCCTACGACAGCGGccgagacagagacggagacggtggcagccgccgctgccgccgacGACGACAATGAggcagcgacgacgacgacgacgtcggCCACAAATTTATCGTCATTTGAGTCCGCGCGTTTGCAGGCTCACACTTCAGTTGCAGCGAAACTCACAAACGAAACGGTTACCACCGGCGACACAGCGACAGGCACAGCAACAGCTACTAATGCAGTTCTAACACTAgaagccacagcagcagccacaacagTTACAGCAGAGATCGAGGCAGATCATAATCGTGTAAACAACGGTACTCAAGAGAGCAACGCGAGTGAAAGTGTCGATAATAAGATCAAAGTTATAAACTATgcgcatcagcagcagcaacaaatctacgaacatcagcagcagcagcagcaacaacaacaacaacaacaacagtttCTCAGTCATCAATTAATACAAGAACAACAGCACCAGGAGCaattgcagcaacagcagcaacaacaagaacaacattGGTTGGCCTACGATTTGACTAGCggatcagcagcagcggccgcagcagcagcagcggcggtgcAAGCAGTCCAAGCAGTGGAGCAGAAGCCCCCCGATTTGTATGCCTTGGCGGCCTCGCATCATCATTTCTTTGGACACCTGAGCTATCCGCCACCGCATCCGCCCGCACAGCTGTACGAGCACTACCAGAGCATCACCGGCGCCAGTACGGATCCATCCATAATGAGGAATAACTTTGCGCTGTACAGCGTTTATGgcgggggaggaggaggagcggccgGAGGAGGCGGAATGCTCACGCACGATCATGTGGTGGCAGCCgccgcagcggcagcaaaTGCACAGAATACGCCCAACATTGACGAGGTCATCCAGGACACACTGAAGGATGAGTGCTTCGATGATGGGCATAGCACGAGCTATCACATGCTGACCTCCGTATCAGATTTGCATTCCCTAAAGGAACCCAGTCCCACCATTTACTCACTGacgcaccagcaacagcatcagcagcagcagcaacagttgcaGCAACAATTGTACcaccaccaacagcagcagcagcagcagcaacagcacctccaacagcagcagcaacaccaacaacagcaccaCCATCACAACAATTCCGCCAGTTCGGTGGGCGGGGATTCCCCTTCGTCCTCCTCGCATGCATTGTCCACGCTCCAGAGCTTCACGCAGCTGACGAGCGCCACAGGCCACAGGGACAGCCTTTCTCCGGAACAGCATGGGGGATACTTCAGTCCCAGCCTGCAGACAACCAGCTCCGTGTACGCCGGACCCCTGCTCACCCAAGCGGCCAATGGGATGCAGTATGGCATGCAGTCGCCCAGCCACGTTCATGCGCAtctccagcagcaacagcagcatccccatcagcagcagcaacatccccaccagcagcacaatccccaccagcaacagcagcagcaacagcagctccaTCAGCATCACaattccagcagcagcagtccgGGACCCGTGGGTCTGGCCTCTGGAACGACTGTCAATGGCAGTGGACTCCTGGACGACGGCTATGGCTCGCCAAAGAGCAGCCacagcggcggcggtggcggagTAGGTGGGAGTGGCGGCGGCACCTTGCCTGCCTTTCAGCGCATTGCATCGGCGAGCAGCGGCTACGGCAGCGGCGTGGCCAATGGCTCCTCGGTGGTCAGTGGAGCCGAACGGTCCGCTGGCTACGCATCGCTGGCCAATTATCGCACTCAGAGCGATGCCTGGCCGGGTCATTACGAGCCAATCAGTTACGCAGCAGCCAGCGCATCCGGTGTCCAGACACAGCTTGGAGGCGGCCTTGGTGGGGCTGGTGTGGTCACGAATGTGATACGCAACGGACGTGAGATATTTGCGGCGAatgcagcagccgccgcagccgtAGATGGCGCCGCAGGACGAGTGGATCCAGGATCCTATCTAACAGCATCGGCATCGCTGTCAGCAACATTTTTCGATGCCGATTATTTCACTGAGGGGCGAGAGTGCGTCAATTGTGGTGCGATCCAGACACCGCTGTGGCGACGCGATAACACGGGACACTATCTGTGCAACGCCTGCGGCTTGTACATGAAAATGAACGGCATGAATCTGGCCGCTGAATCGGGCGGGGATTTCTATAAGAGCTACCCATTTAATGTGAACGCCAGCGGCAGTGGCCGTAGTAAGGCCAACACCCCAACAGCCGCTGGCACAGCCATAGCCACTGCTGTTGCCACTGCGGCGGGGGCAACGGCAGCCCCAGCGACAGCTTCGACGGCAGCGGCAAATGCAACATCGGCGCTTGAAGAGCATGTTAGTCGCGCCAATTCGAGACGCTTGAGTGCCTCAAAGCGCGCTGGCCTGTCGTGCAGCAATTGCCTTACTACCTATACATCATTGTGGCGCCGCAATCCTGCCGGAGAGCCTGTGTGCAATGCCTGCGGGCTGTACTATAAGCTGCACAGCGTCACCCGTCCCTTGGCCATGAAAAAGGATACCATTCAGAAACGCAAGCGTAAGCCCAAGGGAACGAAGAGTGAAAAGTccaagaaaatgaaaatggcaaTGAATGTCAATCTAGAGGGAGGTTCAGGCAGTGGTGCAGGTTCTGCAGGCTCTGGCTCCCACAATGTGGGCATGGGCTTGGATGTCAATGAAGATATGAAACCATACATGCCATACAACACAACCACAttgcaacaccagcagcagcagcagcaatcgcagcaacagcagcagcatcatcagctcATTGctgatcagcagcagcattcaTCGGCTGCCAGCTCGCCCCATAGCATGGCCTCCTCCTCACTATCCCCCTCTGCCACATCACATTCCCATTcgcatcatcagcagcagcagcagcagcatcagttGTGCTCTGGCTTGGACATGTCGCCCACGTCGCCCTATCAAATGTCACCCATCAacatgcagcagcaacattcatcccatcagcaacagcagcagcaacagcaatccTGCAGCATGCAACAGAATTCGCCCAGCACTCCCACCTCCAGCACGGCCTCCATTTACAATACACCATCGCCCACCCACCACCATCAGCACAATATCcataataacaataacaatagcACATtgttcaacaacaacaacaacaacaacaacaataatagtAGCAATGAGAATAACACGAAAATTATACAGAAATATCTGCAAGCTCAACAATTGagcgggagcagcagcaacagcaacagcgggAGCGTGAGCTCGGATCATCATCTATTGGCGCACCTGATGCCGAACTCCATTACGGCGGCAGcacttgcagcagcagctgcagcgacGATCAAACCAGAGTCCACATCGtccacagtcacagccacagccacagtcacgGGGTCAACACCGACCACGGCATCGAGCACATTATCCTCACTGAGcctcagcaacagcaacagcaacactaTCAGTCTGCAAAATCCCTATCAACAGCTGGGGCTTGGAACGCAGGCGATGGCATTGTCTAAGCCAGGAGGACGCAGCGCCTCCCCGCTCTACTATCTCacggaggaggagcagcacaTCAAACTGGAGCAGATggagcatcagcatcatcaggAGCACCAacactcccattcccatcaACAGCATCAGGGAGAGCTAATGCTCAGCCGATCGGGCTCGCTGGACGAGCACTACGAACTGGCGTCCTTCCAGCAACGACAGCAGGAGCTCCATCTCCAGCAGAGTCTGCTCCACGAGCAACAGGTGGCTGTGGCCAGCTATGTCATGCaggccaagcagcagcaggagctggaaCGCAAGTACGTCATGGATCGCGAGACTGTGGTGAAGATGGAGTAG
- Protein Sequence
- MTKTTKPKDKEKATPTPARASTNLLANAAKMKITKALANAKTQQQNKQGRAAPATKETKEPTATGSNATTTTAAMPATAEAVKETAIAAVATETEPTTAAETETETVAAAAAADDDNEAATTTTTSATNLSSFESARLQAHTSVAAKLTNETVTTGDTATGTATATNAVLTLEATAAATTVTAEIEADHNRVNNGTQESNASESVDNKIKVINYAHQQQQQIYEHQQQQQQQQQQQQQFLSHQLIQEQQHQEQLQQQQQQQEQHWLAYDLTSGSAAAAAAAAAAVQAVQAVEQKPPDLYALAASHHHFFGHLSYPPPHPPAQLYEHYQSITGASTDPSIMRNNFALYSVYGGGGGGAAGGGGMLTHDHVVAAAAAAANAQNTPNIDEVIQDTLKDECFDDGHSTSYHMLTSVSDLHSLKEPSPTIYSLTHQQQHQQQQQQLQQQLYHHQQQQQQQQQHLQQQQQHQQQHHHHNNSASSVGGDSPSSSSHALSTLQSFTQLTSATGHRDSLSPEQHGGYFSPSLQTTSSVYAGPLLTQAANGMQYGMQSPSHVHAHLQQQQQHPHQQQQHPHQQHNPHQQQQQQQQLHQHHNSSSSSPGPVGLASGTTVNGSGLLDDGYGSPKSSHSGGGGGVGGSGGGTLPAFQRIASASSGYGSGVANGSSVVSGAERSAGYASLANYRTQSDAWPGHYEPISYAAASASGVQTQLGGGLGGAGVVTNVIRNGREIFAANAAAAAAVDGAAGRVDPGSYLTASASLSATFFDADYFTEGRECVNCGAIQTPLWRRDNTGHYLCNACGLYMKMNGMNLAAESGGDFYKSYPFNVNASGSGRSKANTPTAAGTAIATAVATAAGATAAPATASTAAANATSALEEHVSRANSRRLSASKRAGLSCSNCLTTYTSLWRRNPAGEPVCNACGLYYKLHSVTRPLAMKKDTIQKRKRKPKGTKSEKSKKMKMAMNVNLEGGSGSGAGSAGSGSHNVGMGLDVNEDMKPYMPYNTTTLQHQQQQQQSQQQQQHHQLIADQQQHSSAASSPHSMASSSLSPSATSHSHSHHQQQQQQHQLCSGLDMSPTSPYQMSPINMQQQHSSHQQQQQQQQSCSMQQNSPSTPTSSTASIYNTPSPTHHHQHNIHNNNNNSTLFNNNNNNNNNNSSNENNTKIIQKYLQAQQLSGSSSNSNSGSVSSDHHLLAHLMPNSITAAALAAAAAATIKPESTSSTVTATATVTGSTPTTASSTLSSLSLSNSNSNTISLQNPYQQLGLGTQAMALSKPGGRSASPLYYLTEEEQHIKLEQMEHQHHQEHQHSHSHQQHQGELMLSRSGSLDEHYELASFQQRQQELHLQQSLLHEQQVAVASYVMQAKQQQELERKYVMDRETVVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00536426;
- 90% Identity
- iTF_00581188; iTF_00581187; iTF_00581189; iTF_00472028; iTF_00474176;
- 80% Identity
- -