g10800.t1
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- DMRT2
- Assembly
- GCA_009870125.2
- Location
- CM020872.1:4804079-4805606[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.3e-24 2.9e-20 72.0 16.3 1 47 48 94 48 94 0.99
Sequence Information
- Coding Sequence
- atgcgtttgcgtttgcgtttgctttggctttggcttgggtTTAAATGTTCGCCACTCTGCCGCGATCCTTTCAGTCGATCGTTAGCCGCGACCGTGATAGCAAGGATGAGCCAGATATCGCTGAAGGAACGCCGCCTCCTGCGCACACCCAAGTGCGCCCGCTGCCGCAACCACGGCGTCATCTCGTGCGTCAAGGGCCACAAGAAGCTGTGCCGCTGGCGcgagtgctgctgccccaACTGCCAGCTGGTCGTCGATCGCCAGCGGGTGATGGCCGCCCAGGTGGCCCTGCGCCGCCAGCAGACAATGGAGGCCCTGGAGGCGTCCGCCCAAGTCCAGCATTCGCATCCAGCCACCGCATCCAGCAGCGAGGGCGAGGATTCCTTAACTTCAACGTCGCCACCACCTGTACGAGCGCTAccttcagcagcagcctccACATCCTCCGCATCCACTTCCTCGTCAGCCACGCGCCAGGCACTGATTACCCAGAAAAGGATCTACAAGCAGCGACTGCGCAACCTGCAACAGTCCACGTTGCACATAACAGCAGCCATGGAAGAGTACAAGCAAAGGTTTCCCACGTTCAGTTCTCCGCTGATGGAGCGAATGCGCAAGCGACGCGCGTTCGCTGATCCGGAACTCAACTACGCCATGGAGGCGACGCTGGGCGGTAACGCCCTctatgccgctgccgctgctgctgctgctgctgccatgcaTCAATCGGGGCCGCCGCCATTCACAGCCTCCAACACCATCGCAGCCGCCGTCACGACAACACCCATGCCGCCCGCACACGCCTCGGCAAAGAAGCCTAAGCTCAGCTTTTCAATTGAGTCAATAATGGGCATTAGCACGTAG
- Protein Sequence
- MRLRLRLLWLWLGFKCSPLCRDPFSRSLAATVIARMSQISLKERRLLRTPKCARCRNHGVISCVKGHKKLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEASAQVQHSHPATASSSEGEDSLTSTSPPPVRALPSAAASTSSASTSSSATRQALITQKRIYKQRLRNLQQSTLHITAAMEEYKQRFPTFSSPLMERMRKRRAFADPELNYAMEATLGGNALYAAAAAAAAAAMHQSGPPPFTASNTIAAAVTTTPMPPAHASAKKPKLSFSIESIMGIST*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00484455;
- 90% Identity
- iTF_00517724;
- 80% Identity
- iTF_00580750;