g17264.t2
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- ttk
- Assembly
- GCA_009870125.2
- Location
- CM020872.1:65231293-65235380[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-19 1.1e-15 57.2 0.0 2 45 600 644 599 644 0.97
Sequence Information
- Coding Sequence
- ATGTCTGTGCAACAGTTCTGCCTGCGGTGGAACAATCACCAGCCGAACTTCATATCGGTGTGCTCCTCGCTGCTGCACAATGGCACCCTGGTGGATGTCACGCTGGCTGCCGAGGGGCGCCAGCTGCAGGCCCATAAAATAGTACTGTCTGCATGCAGCTCGTACTTTCAGGCCCTGTTCACGACGAATCCGTGCCAGCATCCGATCGTTATACTGAAAGACGTTCAATATGATGATCTCAAGACGATGGTGGACTTTATGTATTACGGGGAGGTGAACGTGTCGCAGGAGCAGCTACCGCACATACTTAAGACGGCCGAGATGCTCAAGATCAAGGGCCTGGCCGAGATGCCCACGGACCCGGCCAATCTCACCAAATCGGACAGCAAATCATCGAGCGACGGCACTGAGCTGGTGGGTGGCGCCGGCTCTGGTGTGGCGGGAGCAGGAGGTACCTCTGCGGGCAGCCTAGGTgctgccagtggcagcagtgtGGGCGACTCGCTGTGGAGCAGCAGCGAGGCGCAACAgttccaacagcagcaacagcaacaacagcaggcccagcaacagcagcagcatcatcaccaccagcagcagcagcagcaccagctccaacagcagcagcaacaacagcagcaggcccagcaacagcagcagcaacaccatcatcatcaccaccagcatcagcagcagcagcagcaacagcagcagggcgGACAGACGCAGGCGCCGCAGACGCATCACCATCAGATGAGACGAACCCCCTCGCCGCTGAGCGCTGGCACATCGCCGGCCACGCGGCGCAAGAGGCTGCGCAAATCCTCGAATAACGGCTCTGGCGAACGCAACAATGCAGAGGAGCAGCACAACAGTTCTTTGGATGCCGGGAGTGCCGCTGGCAATGCGGGCCTCAGTCTCGCCCAAATGAGCCAAATGTCCTTTGGCGGGGCGGCCAATACGGCGGCTGCATTGGGCAGTCTCGCGAGCCATTCACTGCACGCTTCCAAGCTGCTGAAGGAGTCGGCGAGCAGCGAGCTGgaccagcagccgcaggacTCGGACCTGGACGACGGACACGGACActtacatatgcaaattAAGCCCGAGGTGGATATCGGCGGAGTGAACCAAACGATGCCCCTGGACATTTCCGGCGCCACCACACCATCTGAGCACGATGCGCCAAACTCTCAGTCCTCGCACTCGGGTCTGCAATGGACAGTTGTCGATTCAAACTATCCGCGCTTTTCCCTGCCCGCCTGCCAGTCCAACCTGATTGGGaatggcagcggtggcggtggcggtggcggcggcggtgccGGCAATCAGAGCAGTGCGAATAGTAGCGCCGGCGGCGGCAACGTAGGCGGTGGTGGCACCAACGAgcagcgtcagcagcagcagcacgaggcacagcagcaggccacccagcagcagcagcatctgcagcAACTGcactaccagcagcagcagcaacagcagcagcaggagcaggcggcggcggccgcctCCGGTCAGGCGTACTCCTCCCAGATCATAACCGTCAACAACCTAGTCAGCGGATATGCGACGGCGGCCCAGAACCTCTCGCCCACCTCACCCAACGAGTCCAACATGGTCCAGTCTGTCTACAGTCAGGGCCCCACGCCCACACAGTCGCCGGTGCATTCTGGCGTGACCGCCGCAGGCGCAGGGGGAGCAAGTACAGGCAcaggcagcggcggtggcggcggcaacagcagtGGAGCGGCGAGCCAGGTGGTGAAGCGCAAACGATCAGTGAACCCACAAGGCGACGAGAACTTCATAAGGGCTCTGGAGGCGGTTCGCACGGGTGGAATTGGCTTCTGCAAGGCGGCCCGATTGTACGGCGTGAACAATCGGACTCTGTGGCTCGAGTACAAGAAGCGTGGCTACCCGGTGTCGCGGCCGAGCATAAAGGCGCGTGTGGTCAAGCAGGAGCCGAACCTCTCGCCGTCTCCAACACCGTCAACAAATCCGGGCGACGACACAGCAAACGAAACGCTCAACATGCAGATTCCACCGCAGGCAGAGACCCCGACACCTTCCCTGATGTGCACACCCCACCAcggcagcatcggcagcagtgCGGGCACCTTGCCCAGCGGCGGCAACTCCCATCCGGCCATCGGGGTGATGAGCCTCTTCGACGCACGCTACATGGACTCGCCGGGAAATGTACACACCATGTCTCGGCAGCGGTACATCGACGCCACAGGCGCCGGGGCGGGAGCAGCAGGAACGGGTGCGGGCACCATCAACGTCAATCCGACCACTGCAATGAATCTACAGAGTATTAACTTTAACTCAATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSSDGTELVGGAGSGVAGAGGTSAGSLGAASGSSVGDSLWSSSEAQQFQQQQQQQQQAQQQQQHHHHQQQQQHQLQQQQQQQQQAQQQQQQHHHHHHQHQQQQQQQQQGGQTQAPQTHHHQMRRTPSPLSAGTSPATRRKRLRKSSNNGSGERNNAEEQHNSSLDAGSAAGNAGLSLAQMSQMSFGGAANTAAALGSLASHSLHASKLLKESASSELDQQPQDSDLDDGHGHLHMQIKPEVDIGGVNQTMPLDISGATTPSEHDAPNSQSSHSGLQWTVVDSNYPRFSLPACQSNLIGNGSGGGGGGGGGAGNQSSANSSAGGGNVGGGGTNEQRQQQQHEAQQQATQQQQHLQQLHYQQQQQQQQQEQAAAAASGQAYSSQIITVNNLVSGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVTAAGAGGASTGTGSGGGGGNSSGAASQVVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTANETLNMQIPPQAETPTPSLMCTPHHGSIGSSAGTLPSGGNSHPAIGVMSLFDARYMDSPGNVHTMSRQRYIDATGAGAGAAGTGAGTINVNPTTAMNLQSINFNSI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00487219;
- 90% Identity
- iTF_00517779;
- 80% Identity
- iTF_00580808;