Dbif009679.1
Basic Information
- Insect
- Drosophila bifasciata
- Gene Symbol
- ttk
- Assembly
- GCA_009664405.1
- Location
- CM019043.1:29457353-29461506[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-19 6.6e-16 57.5 0.0 2 45 503 547 502 547 0.97
Sequence Information
- Coding Sequence
- ATGTCTGTGCAGCAGTTCTGCCTGCGGTGGAACAATCACCAGCCGAACTTCATATCGGTGTGCTCATCGCTGCTGCACAATGGCACCCTGGTGGATGTCACGCTCGCCGCCGAAGGCCGCCAGCTGCAGGCCCATAAAATAGTACTGTCTGCGTGCAGCTCGTACTTTCAGGCTCTGTTCACGACGAACCCGTGCCAGCATCCGATCGTTATACTGAAAGACGTTCAATATGATGATCTCAAGACGATGGTGGACTTTATGTATTACGGGGAGGTGAACGTGTCGCAGGAGCAGCTGCCGCACATACTCAAGACGGCGGAGATGCTCAAGATCAAGGGACTGGCCGAAATGCCCACAGACCCGGCCAATCTCACCAAATCGGACAGCAAATCATCGAGCGACGGCACAGAGCTGGTTGGTGGCGCTGGTTCCGGTGTGCCGGGAGCTGGAGGTACCTCCGCGGGCAGCCTGGGCGctgccagtggcagcagtgtGGGCGATTCGCTCTGGAGCAGCAGCGAGGCGCAGCagtttcagcagcagcagcagcaacaacagcaggcccagcaacagcagcagcatcatcaccaccagcagcagcaacaccagctccaacagcagcaggcgcagcaacaacagcagcaggcgcagcaacagcagcagcaacaccatcatcatcaccaccagcatcagcagcagcagcagcagcaacaacaacaaggcgGACAAACGCAGGCGCCGCAGACGCATCACCATCAAATGAGACGAACACCCTCGCCGCTGAGCGCTGGCACCTCCCCAGCGACGCGGCGAAAGAGGCTGCGCAAATCCTCGAATAACGGTTCTGGCGAACGCAACAACGCGGAGGAGCAGCACAACAGTTCTTTGGACGCCGGCAGTGCCGCAGCTAATGCGGGCCTCAGTCTCGCCCAGATGAGCCAAATGTCATTTGGCGGGGCGGGCAATACGGCGGCTGCATTGGGCAGTCTGGCCGGCCATTCGCTGCACGCGGCCAAGCTGCTGAAGGAGTCGGCGAGCAGCGAGTTGGAGCCGCAGCCGCAGGACTCGGATCTGGACGACGGACACGGACACTTACATATGCAAATTAAGCCCGAAGTGGATATCGGCGGAGTGAACCAAACGATGCCCCTGGACATTTCTGGCGCCACCACACCATCCGAGCACGATGCGCCAAACTCTCAGTCCTCGCACTCTGGTCTGCAATGGACAACGTACTCCTCCCAGATCATAACCGTGAACAACCTAGTCAGCGGATATGCGACGGCGGCCCAGAACCTCTCCCCCACCTCGCCCAACGAGTCCAACATGGTCCAGTCTGTCTACAGCCAGGGCCCCACTCCCACTCAGTCGCCGGTGCATTCTGGCGTGACCGCGGCAGGAGCTGGCGGTGCTGGTTCAGGCACAGGAAGTGGCGGTGGCGGAGCTAACAGCAGTGGAACGGCCAGCCAGGTGGTGAAGCGTAAGCGATCGGTGAATCCGCAAGGCGATGAGAACTTTATAAGGGCGCTGGAGGCAGTGCGCACAGGAGGAATTGGCTTCTGCAAGGCGGCACGACTATACGGCGTGAACAATCGAACGCTGTGGCTGGAGTACAAGAAACGTGGCTATCCGGTGTCGCGGCCGAGCATAAAGGCGCGCGTGGTCAAGCAAGAGCCGAACCTCTCGCCATCGCCAACACCGTCAACGAATCCGGGCGACGACACAACGAGCGAGACGCTCAATATGCAGATACCACCGCAAGCGGAAACCCCGACACCATCCCTGATGTGCACTCCCCACCACGGCAGCATCGGCAGCAGTGCGGGCACCTTGCCCAGCGGCGGCAACTCCCATCCGGCCATCGGGGTGATGAGCCTCTTCGATGCCCGCTACATGGACCCGCCGGGAAATGTACACACCATGTCTCGGCAGCGGTACATCGACGCCACAGGGGCCGGGGCGGGAGCAGCTGGAACGGGTGCGGGCACCATCAATGTCAATCCGACCACTGCAATGAATCTACAGAGTATTAACTTTAACTCAATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSSDGTELVGGAGSGVPGAGGTSAGSLGAASGSSVGDSLWSSSEAQQFQQQQQQQQQAQQQQQHHHHQQQQHQLQQQQAQQQQQQAQQQQQQHHHHHHQHQQQQQQQQQQGGQTQAPQTHHHQMRRTPSPLSAGTSPATRRKRLRKSSNNGSGERNNAEEQHNSSLDAGSAAANAGLSLAQMSQMSFGGAGNTAAALGSLAGHSLHAAKLLKESASSELEPQPQDSDLDDGHGHLHMQIKPEVDIGGVNQTMPLDISGATTPSEHDAPNSQSSHSGLQWTTYSSQIITVNNLVSGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVTAAGAGGAGSGTGSGGGGANSSGTASQVVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTTSETLNMQIPPQAETPTPSLMCTPHHGSIGSSAGTLPSGGNSHPAIGVMSLFDARYMDPPGNVHTMSRQRYIDATGAGAGAAGTGAGTINVNPTTAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00487369; iTF_00603268; iTF_00563823; iTF_00563982; iTF_00471536; iTF_00517779; iTF_00517633; iTF_00580636; iTF_00580808;
- 90% Identity
- iTF_00487369;
- 80% Identity
- iTF_00487369;