g3471.t1
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- Rel
- Assembly
- GCA_009870125.2
- Location
- CM020868.1:28081923-28084900[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-52 6e-49 166.4 0.6 1 168 136 318 136 319 0.95 2 2 0.85 4.3e+03 -2.3 0.1 121 164 563 606 560 608 0.82
Sequence Information
- Coding Sequence
- ATGAGCAATATCTTcgatttggacaagggaaagAATGTTCAGTACATGAACGAAGCCTCCTGCACGAGTGGATATAGCAGTGGAAACTCGCCATCATCCGTAATGTCGCCATCACATTCCCCCGAAACGGTGGCGCTGCAAAATGATTTCGCAAATCTAAATCTACCACAGGCGAACTCACCTCAACCGCCAGTGCAGAGTTTACCATACCAGATGTTGAATGGCAACCTTGTTGTTGACGCCCGCAATTTGACGACTGCCACGAGTTTTGGAAACATGTATGTGGACCATCCATACTACGCCCAGGCCCCCCCCGACACAACACAAAACTTTGGCTATAATCGAACCAATGGCGGCGTCGGCGGCCTGGTGGCCAAAACGGAGTTCGGGCACATGCCCGCTGCCCTGCGCATCGTGGAGCAACCGGTGGAAAAGTTTCGCTTTCGATACAAGAGCGAAATGCACGGAACACATGGCTCGCTCAACGGGGCCAACTCGAAGCGCACACCGAAAACGTTTCCAGAGGTGACGCTCTGCAACTACGACGGGCCGGCGGTGATACGGTGCAGTCTCTTCCAGACGAACCTCGAAAGTCCGCACTCACACCAGTTGGTGGTGCGTAAGGAGGACCGGGATGTGTGCGATCCGCACGACCTGCACGTGTCCAAGGACCGCGGCTATGTGGCTCAGTTCATCAACATGGGCATCATACACACGGCCAAGAAGTATATTTTCGAAGAGCTCTTCAAAAAGAAGCGGGATCGCCTGGTGTTCGAAATGAAGCGTCGCGAGCTGTCCACCAAGGAGGTACAGAAGCTGGAAAAGGAGACAGAAGACGAGGCCAAGGTTATGAATCTGAATCAGGTGCGCCTCTGCTTTGAGGCCTACAAAATCGAGGACAATGGCAGTTGGGTGCCTATTGCCCACCCCGTTTTCAGTAATGCGATCAACAACCGCAAATCTGCCCAAACGGGAGAGCTGCGCATCGTGCGGTTGAGCAAGCCGACCGGCTCTGTGATGGGCAACGATGAgctcatcctcctcgtggAGAAGGTCAGCAAGAAGAACATCAAGGTGCGCTTCTTCGAGGAGGACGAAGACGGGGAGCCTGTGTGGGAGGCGTATGCCAAGTTCCGTGAATCGGATGTTCATCATCAGTATGCCATCGTTTGCCAGACGCCCGCCTACAAGGACAAGGACGTCGACAGGGAAGTGAATGTCTCCATTGAGCTGATACGACCCTCGGACGATGAGCGCTCCTACCCATCACTGCCGTTCCGCTACAAGCCACGTGATGCTATCGTCTCGCGAAAACGCCGGCGCACCTGTTCGATTGCGACCAACAGCAACTCCGGCGGCAGTGCACAGAACTCTGGGGACCTGCCCAGGACACTGGCTCTGGACCAGCCCCTGGGAGTGCCTCAGGGACACGAAGTGCCCATGGGGGGAACGCACTTCACGTACCAAGATCAGACCATCAGCCAAGAGTTTGGACGGGAATCGGTCCTGAATGAATTGATCACCTCGGAAGACTTCCGCCAGCTGATCGAAACGCAGTCCGTAGAACTCATGCCGATTTGCATGGGCGCCCTCGAGTCAGATGGCCATGGCCGGGCAGCGGAGCGACCGGCTGTCCCAACGGCAGCACCCAACCGGAATTGGACGCCACACTTTTTGAGTGCAATCTTCAAGATCTACGAGGAGCATCTGCGGTCACCAAATGACAGCTCGCGGAAGCAGGTGGAGGAAATGTTCACCGAACACGCCCTGCGgaacgacaacaacgacacGCTGCTGCACGAGGTGATCATCAGCcagcggacagacggacagctAAAGCAGGCCATCCGAACCATTGAGGTGATGAAGTACTTCAAGCTGCATGATCTGGCGAACAATGCCCTCAATGCGGATGGGGATAGTGCTCTGCATGTGGCCTGCCAGCAGGATCGCGAATACTATATACGGCCACTGCTGAGCCTTGGATGTAGTCCCAATCAGCAGAATCATGCAGGGAATACGCCCCTACATTTGGCCGTCAAGGAGGAGCGTAAGTCCTGCATTGAAAGCTTCCTGAAGGGTGGCAAGCCCAGCGTAAGGCTCGACCTGACGCTCAAAAATGACGATGGATTGACGCCGCTGCATATGGCCATCCGGCAGAATAATTACGATGTGGCCAAGAAGCTGATCAATCACGATCGCACCTCCATTAGTGTGTCGAACACAAAAGACGGCAACAATGCCCTCCACATGGCGGTGCTTGAGCAGAGCCATGCACTGATTGTGCTCATTGTGGATTCGCAGGACACGACCCTTTCGGACATACTAATGTCGCGCAATGCGGCCGGTTTTACGCCGATGGATCTGGCGCGTTCCAAGGGCGACGGAAAGGTGCTTCAGCTGCTGGACAAGGTGTATTCGGAGAAGAATGATTCGGCCATGACCTGGGTACCCAACAATATCAAAGAGGAGCAAGACACCTCCTCCGATGAGAGCAGCGAGGCAGCCCTAGAGATCAAAAGCGAGATGCTGGACCCCAAAACGGAATTGGAAGAGCACAGCCGCGAAATGGAATGGGGGGGCAATGAAATTGTCATCGAGACGGAGGTGGAAACAAGCATCGATCCCAGATACAATCTTCAGCTGCTGTTGAGCAACAAGAAGCGATTCGATAAGCTGAAGACACTGTTAAACAACCCGATGGGCAGCGGACCCGACGGCCATCAACCCAAGTGGAAGCATTTGGCACGTATTTCGCATATGGAGCGATTCAGTTTCTTTTGGCAGGACGCAGCGGCAATGCTCGACTATATTCTCAATAATGCCAAGTGTGTGGAGTATAGCACCTTTGTCTTGGCCCTGGAGATGGTCGATTCGGAGGCATCGGCCCTGCTTACTTCCGATTAG
- Protein Sequence
- MSNIFDLDKGKNVQYMNEASCTSGYSSGNSPSSVMSPSHSPETVALQNDFANLNLPQANSPQPPVQSLPYQMLNGNLVVDARNLTTATSFGNMYVDHPYYAQAPPDTTQNFGYNRTNGGVGGLVAKTEFGHMPAALRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLCNYDGPAVIRCSLFQTNLESPHSHQLVVRKEDRDVCDPHDLHVSKDRGYVAQFINMGIIHTAKKYIFEELFKKKRDRLVFEMKRRELSTKEVQKLEKETEDEAKVMNLNQVRLCFEAYKIEDNGSWVPIAHPVFSNAINNRKSAQTGELRIVRLSKPTGSVMGNDELILLVEKVSKKNIKVRFFEEDEDGEPVWEAYAKFRESDVHHQYAIVCQTPAYKDKDVDREVNVSIELIRPSDDERSYPSLPFRYKPRDAIVSRKRRRTCSIATNSNSGGSAQNSGDLPRTLALDQPLGVPQGHEVPMGGTHFTYQDQTISQEFGRESVLNELITSEDFRQLIETQSVELMPICMGALESDGHGRAAERPAVPTAAPNRNWTPHFLSAIFKIYEEHLRSPNDSSRKQVEEMFTEHALRNDNNDTLLHEVIISQRTDGQLKQAIRTIEVMKYFKLHDLANNALNADGDSALHVACQQDREYYIRPLLSLGCSPNQQNHAGNTPLHLAVKEERKSCIESFLKGGKPSVRLDLTLKNDDGLTPLHMAIRQNNYDVAKKLINHDRTSISVSNTKDGNNALHMAVLEQSHALIVLIVDSQDTTLSDILMSRNAAGFTPMDLARSKGDGKVLQLLDKVYSEKNDSAMTWVPNNIKEEQDTSSDESSEAALEIKSEMLDPKTELEEHSREMEWGGNEIVIETEVETSIDPRYNLQLLLSNKKRFDKLKTLLNNPMGSGPDGHQPKWKHLARISHMERFSFFWQDAAAMLDYILNNAKCVEYSTFVLALEMVDSEASALLTSD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517485;
- 90% Identity
- iTF_00574584;
- 80% Identity
- -