Basic Information

Insect: Drosophila pseudoananassae
Gene Symbol: -
Assembly: GCA_018153035.1
Location: JAECXR010000056.1:4066475-4068332[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00057 0.041 14.2 7.2 1 23 231 254 231 254 0.97

2 8 4.9e-06 0.00035 20.7 1.5 2 23 264 286 263 286 0.95

3 8 0.0048 0.34 11.3 3.7 1 23 295 318 295 318 0.91

4 8 0.1 7.3 7.1 0.1 3 23 328 348 326 348 0.96

5 8 0.00055 0.039 14.2 6.4 1 23 354 376 354 376 0.98

6 8 0.00016 0.011 15.9 0.1 1 23 381 403 381 403 0.98

7 8 1.5e-06 0.0001 22.3 1.7 1 23 409 431 409 431 0.97

8 8 0.0087 0.62 10.5 3.8 1 23 437 460 437 460 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00057	0.041	14.2	7.2	1	23	231	254	231	254	0.97
2	8	4.9e-06	0.00035	20.7	1.5	2	23	264	286	263	286	0.95
3	8	0.0048	0.34	11.3	3.7	1	23	295	318	295	318	0.91
4	8	0.1	7.3	7.1	0.1	3	23	328	348	326	348	0.96
5	8	0.00055	0.039	14.2	6.4	1	23	354	376	354	376	0.98
6	8	0.00016	0.011	15.9	0.1	1	23	381	403	381	403	0.98
7	8	1.5e-06	0.0001	22.3	1.7	1	23	409	431	409	431	0.97
8	8	0.0087	0.62	10.5	3.8	1	23	437	460	437	460	0.97

Sequence Information

Coding Sequence: ATGGCCTCCGCCCAGCTGGAGGAGCAAGTTACCCCACTGGCCGCCAGTGATTGGCGGCTGTGGTGCCGCCTCTGTGCCAAGGACGATGTTCAGGGAAATATGAACGTCTTCCTCAAGAACGAGAACTCTGGAGACGGACCCTCCGGCGATCTCTCATTGGCCACCGCCATTGGAAAGTATTTTTGGGTAAATATTTCCCGTGGCGAGGATTTACCGGAAGTGATATGCAGCGAGTGCCTCACGTTGGTCACATCCTTGGTGAATTTCTCGGAACGAATCACCAAAGTGCAGAAGCTCTACTGTATCCTCCAAAGTACCGGGCAGCAAGATGACTTGAACCTACAGGAACTACGCTCCAGATTTGGTCTGCTAGAGGAAGCCGAGGTGCATTATTTGGATGAGAAGCCAAAACTCGACATTCGGGAAGGATTACTTTCTGAAGAGTCAACTTTCGAGTTGGAAAATCCACTAACAACAGTTGAGACTGATGAGGTGGACGAGGAGGAAGAGGAGGATTTGGAGCATGAGGAGGAGCAGAACCATGTTTTGGATGAGACGGAGGGGGGCACGAAACCTGTGGAAGAGGATGAAGAAACTGTTTTACTGAAACTTTGCGATGCCTATGGTATCAGCGAGCAAGGTTCTGCCGACGAGCAGTCGCCAAAAAAATCAGAGAAATCCGAAAAGGAGCACCAATGCAGTGAATGCTCTCGAACTTACACTCATGCTCGTACCCTGCACAGACATTTGAGGCAGGATCACGGAAAGATTGAAAGTATAGACTCGCTGACCTGCACCGAGTGTTCCAAGAAGTTTCGCACGCGCTTTGGTCTGGAGCGTCACATGCAGCAAGGACACTTGCCCCTTCCAGACCGCAAGCAGTTCTCCTGTCATCGCTGCGACAAGAAGTTCACGAGCAGTGCGTCCGCCCAATATCATTCGCAGTATATGCACCTGGACGAGCGACCCCGACCTGTGATCTGCGAGCAATGCGGCGTGGGTGTGCACTCAATAAGTGCCCTCAAGGAGCATGTTTTGAAGCACACGGACTACGCACCCTTTGAGTGCGAGGTGTGCCGCAAGTGCTTCAAGTCCGCCACCCGCCTAAAGCATCACAAAGAGACCCACGATCCGCACAAGTACATTTGCCCCGAGTGTGGTATGCAGCTGAACTCCCGTCCGACCCTTAATCGCCACCGATTGGTTCACACCGATCAAATGCAGCACAAGTGCGATTACTGCGGCCGGGAGTTCAAAAGGGCCAAGGCCCTGAAAAACCACCTAATCCTGCATACGGGCCTGAAGCCGTACTCCTGTGATTTCTGCGATCGGACCTTTGCCAACGGCTCCAACTGTCGCACGCACAAAAAGAAGGCCCATCCCGAGGAGCTGGCCGCCCAAGAGGCGGCGGGCGGATCGAAGACCTACAACCGAAACATACCTAAGCTCGAGGCTCTCAAGGCGTTCACTAAAAACAAGGATAATCTTTCACCTGTGGCCACTAAGCAAAGTGGATGCTTTGCTTTTGGTAAAAAACCAAAAGCTCCGGCCAAGGAGGATGTTGCGTTGGAACCGAGTGCAGTTACTAATCAGGAATCCGAAGTGGCACCTGAACCCGCAGATTCCACTGATCACTCAGTAGAAACAGAACCCACTACCGAAGCCCCATCCTCCGCCATACCTACGATAGACAACATCTACCATCAGATCATGATTAACTATCGCTAA
Protein Sequence: MASAQLEEQVTPLAASDWRLWCRLCAKDDVQGNMNVFLKNENSGDGPSGDLSLATAIGKYFWVNISRGEDLPEVICSECLTLVTSLVNFSERITKVQKLYCILQSTGQQDDLNLQELRSRFGLLEEAEVHYLDEKPKLDIREGLLSEESTFELENPLTTVETDEVDEEEEEDLEHEEEQNHVLDETEGGTKPVEEDEETVLLKLCDAYGISEQGSADEQSPKKSEKSEKEHQCSECSRTYTHARTLHRHLRQDHGKIESIDSLTCTECSKKFRTRFGLERHMQQGHLPLPDRKQFSCHRCDKKFTSSASAQYHSQYMHLDERPRPVICEQCGVGVHSISALKEHVLKHTDYAPFECEVCRKCFKSATRLKHHKETHDPHKYICPECGMQLNSRPTLNRHRLVHTDQMQHKCDYCGREFKRAKALKNHLILHTGLKPYSCDFCDRTFANGSNCRTHKKKAHPEELAAQEAAGGSKTYNRNIPKLEALKAFTKNKDNLSPVATKQSGCFAFGKKPKAPAKEDVALEPSAVTNQESEVAPEPADSTDHSVETEPTTEAPSSAIPTIDNIYHQIMINYR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00550459;
90% Identity: iTF_00550459;
80% Identity: -