Basic Information

Insect: Drosophila monieri
Gene Symbol: -
Assembly: GCA_035047585.1
Location: JAWNPJ010000011.1:2350783-2352670[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00064 0.051 14.2 7.2 1 23 237 260 237 260 0.97

2 8 1.1e-05 0.00084 19.8 1.2 2 23 270 292 269 292 0.95

3 8 0.0053 0.42 11.3 3.7 1 23 301 324 301 324 0.91

4 8 0.12 9.1 7.1 0.1 3 23 334 354 332 354 0.96

5 8 0.00061 0.049 14.2 6.4 1 23 360 382 360 382 0.98

6 8 0.00018 0.014 15.9 0.1 1 23 387 409 387 409 0.98

7 8 1.6e-06 0.00013 22.3 1.7 1 23 415 437 415 437 0.97

8 8 0.0097 0.77 10.4 3.8 1 23 443 466 443 466 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00064	0.051	14.2	7.2	1	23	237	260	237	260	0.97
2	8	1.1e-05	0.00084	19.8	1.2	2	23	270	292	269	292	0.95
3	8	0.0053	0.42	11.3	3.7	1	23	301	324	301	324	0.91
4	8	0.12	9.1	7.1	0.1	3	23	334	354	332	354	0.96
5	8	0.00061	0.049	14.2	6.4	1	23	360	382	360	382	0.98
6	8	0.00018	0.014	15.9	0.1	1	23	387	409	387	409	0.98
7	8	1.6e-06	0.00013	22.3	1.7	1	23	415	437	415	437	0.97
8	8	0.0097	0.77	10.4	3.8	1	23	443	466	443	466	0.97

Sequence Information

Coding Sequence: ATGGCCTCCGACCAGCTGGAGGAGCAAGTTACCCCAACGGGCGCCACCGATTGGCGGCTGTGGTGCCGCCTGTGCGCCAAGGACGATGTTCAGGGCAACATGAACGTGTTCCTCAAGAACGAGAACTCCGGAGACGGTCCCTCCGGCGATCTTTCATTGGCCACCGCCATTGGAAAGTATTTTTGGGTAAATATTTCCCGCGGTGAGGATTTGCCAGAAGTGATATGCAGCGAATGCCTCACGTTGGTCACATCCTTGGTGAATTTCTCGGACCGAATCACCCGAGTGCAGAAGCTCTACTGTATCCTCCAAAGTACTGGGGAGCGAGATGACTTGAATCTGCAGGAACTACGCTCGCGATTTGGGCTGCTAGAGGAAGCGGAGGTGCATTATGTGGACGAGAAGCCAAAACTTGACATGCGGGAGGGATTACTGCCTGAAGAGTCAACTTTTGAGTTGGAAAATCCACTAACCACTGTTGAAACCGATGAGgtcgacgaggaggaggaggatttGGAGATGCCAGCGCCAGAGCATGAGGAGGAGCAGGATCAGGGTATAGATGAGACGGAGGATGACCAGCAACAGGCGGAGGAGGATGAAGAAGCAGTTCTGCTGAAACTCTGCGATGCTTATGGTATCAGTGAGCAAGAGCAAGATTCGGCCAGCGATCATTCGCCTAAAAAAGCTGAGAAATCCGAAAAGGAGCACCAATGCAGCGAGTGTTCTCGAACTTATACCCATGCTCGTACCCTGCACAGACATTTGAGGCAGGATCACGGAAAGATACAAAGCTTAGACTCTCTTACTTGCACTGAGTGCTCTAAGAAGTTTCGTACGCGCTTTGGCTTGGAGCGACACATCCAGCAAGGACACCTGCCCCTTCCAGACCGCAAGCAGTTCTCCTGTCACCGTTGCGATAAGAAGTTCACGAGCAGTGCGTCCGCCCAATATCATTCACAGTACATGCACCTGGACGAGCGACCACGCCCAGTGATTTGTGAGCAATGTGGCGTGGGTGTTCACTCAATCAGTGCCCTTAAGGAGCACGTATTGAAGCACACGGACTACGCACCCTTTGAGTGCGAGGTGTGCCGCAAGTGTTTCAAATCCGCCACCCGCCTGAAGCATCATAAGGAGACGCACGATCCGCACAAGTACATTTGTCCCGAGTGTGGTATGCAGCTTAACTCCCGTCCGACCCTTAACCGCCACCGACTGGTCCACACCGATCAAATGCAGCATAAGTGCGACTACTGCGGCAGGGAGTTCAAGAGGGCCAAGGCCCTGAAAAACCACCTAATCCTGCATACGGGCCTGAAGCCGTACTCCTGTGATTTCTGCGACCGGACCTTTGCCAACGGCTCCAACTGCCGGACGCATAAAAAGAAGGCACATCCCGAGGAGCTAGCCGCCCAAGAGGCGGCGGGCGGGGCCAAGAGCTACAACCGAAACATACCCAAGCTGGAGGCACTCAAGGCGTTcaccAAAAACAAGGATAATCTATCGCCTGTGGCTACAAAGCAAAGTGGTTGCTTCGCTTTTGGGAAAAAACCCAAAGCTCCAACTAAGGAGGATGTTACGCTGGAACCGAGTGCAGCTACAAATCAGGAATCCGAAGTGGCACCGGAGTCCGCCGATACTGTTGATCCCGCTGACGAAACAGAGCCCACGACCGAAACTCCATCCACCGCCATACCTACGATAGACAACATTTACCATCAAATCATGATTAACTATCGTTAA
Protein Sequence: MASDQLEEQVTPTGATDWRLWCRLCAKDDVQGNMNVFLKNENSGDGPSGDLSLATAIGKYFWVNISRGEDLPEVICSECLTLVTSLVNFSDRITRVQKLYCILQSTGERDDLNLQELRSRFGLLEEAEVHYVDEKPKLDMREGLLPEESTFELENPLTTVETDEVDEEEEDLEMPAPEHEEEQDQGIDETEDDQQQAEEDEEAVLLKLCDAYGISEQEQDSASDHSPKKAEKSEKEHQCSECSRTYTHARTLHRHLRQDHGKIQSLDSLTCTECSKKFRTRFGLERHIQQGHLPLPDRKQFSCHRCDKKFTSSASAQYHSQYMHLDERPRPVICEQCGVGVHSISALKEHVLKHTDYAPFECEVCRKCFKSATRLKHHKETHDPHKYICPECGMQLNSRPTLNRHRLVHTDQMQHKCDYCGREFKRAKALKNHLILHTGLKPYSCDFCDRTFANGSNCRTHKKKAHPEELAAQEAAGGAKSYNRNIPKLEALKAFTKNKDNLSPVATKQSGCFAFGKKPKAPTKEDVTLEPSAATNQESEVAPESADTVDPADETEPTTETPSTAIPTIDNIYHQIMINYR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00566306; iTF_00477579; iTF_00615725; iTF_00476135; iTF_00580180; iTF_00546170; iTF_00504197; iTF_00615111; iTF_00481756; iTF_00539167; iTF_00488225;
90% Identity: iTF_00566306; iTF_00580180; iTF_00481756; iTF_00476135; iTF_00539167; iTF_00488225;
80% Identity: -