Basic Information

Gene Symbol
hang
Assembly
GCA_018153035.1
Location
JAECXR010000037.1:449450-460460[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.25 18 5.9 1.0 3 23 359 380 358 380 0.93
2 17 0.32 23 5.5 3.2 3 22 488 507 486 507 0.89
3 17 0.00054 0.039 14.2 3.3 1 22 610 631 610 633 0.90
4 17 0.042 3 8.3 0.1 2 21 645 664 644 665 0.93
5 17 0.00063 0.045 14.0 0.2 2 23 792 814 791 814 0.95
6 17 0.0018 0.13 12.6 0.1 1 23 822 845 822 845 0.96
7 17 0.00026 0.018 15.3 2.9 2 23 1039 1061 1038 1061 0.97
8 17 0.02 1.4 9.3 0.2 2 23 1070 1092 1069 1092 0.95
9 17 0.00072 0.051 13.9 0.2 1 23 1105 1128 1105 1128 0.97
10 17 0.00011 0.008 16.4 1.1 1 23 1183 1205 1183 1205 0.99
11 17 0.0018 0.12 12.6 0.9 1 23 1213 1236 1213 1236 0.96
12 17 0.69 49 4.5 0.3 2 19 1244 1261 1244 1262 0.93
13 17 2.4e-05 0.0017 18.5 0.4 3 23 1373 1393 1372 1393 0.98
14 17 0.0046 0.32 11.3 0.1 1 23 1430 1452 1430 1452 0.97
15 17 5.6e-05 0.004 17.4 0.6 2 23 1538 1560 1537 1560 0.93
16 17 1.2 88 3.7 0.1 2 20 1580 1598 1579 1600 0.91
17 17 0.006 0.42 11.0 0.4 3 23 1615 1635 1615 1635 0.98

Sequence Information

Coding Sequence
ATGCTATCCAGCTGGCCAGTGGTGTGGTCGAGTCGAGTCGAGTCCAAAGCGGGCGTCGTCCGGGGCACTCTGATCACGCCCCAGGATCGATTGTCCTTGCAGATATGCCACGCCTGCATCAGCTACCTCAACTCGTGGCAGAGCTTCAAGAACCGATCCCTCATCTCCCAGACCAAGCAGCGCCAGTGGCTGGAGGCGAACAACAGCAGCAGCATCCACAAGAGCAAGCTGCTCAACTACCTGGACCTGAACAGTGCCGAGAATGGCTCCGCATCCGATCATCATCATCATCAGCAGCGTCAGAACCAGAACCAGAACCAGAACCAGCAGCACGTCCTGGAGAATGAGGATGAAACGGACAATGCCGGGATACCGGGAGCGGCAGCCACAGCGGCTGCCATTCTGGACGGCATACCCTCGCTGAAGAAACGAAAATCTCTAACAGTCTATCGGTGCCACCACTGCCGCCGCTGCCCGTTACTGCTCCCGCTGCCGTTGCTCCTCCGTCCGCCCTCCCCCCTTCCACCCCCTCCTGCTCCACCGCCGCCGCCTCCTTCTGCTGCTGCCGGCGCCGGCGCCTCCAATCCTCCGCCCGCTGGCGTGGCTGGTGGCAGGGAGAGCTTGTCGGTGGCACTGCCACTGGATTTCAGCCAAGCTAGCTGCAGCAGCAGCAGCAATCGCCTGTCCGGCCTCCTCCTCCAGCAGCAGCAACCGTCGGCTGCCGCAACTGGCGCTGCGCCACCTTCCGCATCCGCATCCACATCCGCAACCGTGTCCGCGTCTGCGTCCGCATCTGCTCCACTGCTCATGCCGCCACTGCCAGCGGTGCCCATCAAAGATGAGCCCATCGACACGGATGACGACTACCAGATGAAGTCGATTGACGAGTCCGACGACATGGTCGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGCGACATGCCGTTGATGACCTCCGACTACGACTACACGGCCCAACATGGCGTCACCGCCGCCTCCGCAGCCGCCTCCCTGCCGGCCAATGCCGTCGCCAATGTGGCCGCTGCCGGCGACTCCAAGGTGGCCAGCTGCCGGGCCTGCAGCCTGCAGTTCTCCACGCGCGCCAATGCCCGTCGCCACGAACGCAACCTGCACCCCAATCTGTTCCAGCTCTCCACCGACTCGCCCCACAACACGCCCATCACCAAGCCCACGCCCGCCCTGGCCGCCGCCCTGGAGATCCAGCGGGCAGCCGCCGAGGCAGCCACCGCCGAGGCGAACCGAGCTGCCGGAGCGGCGGGCGGGAACATATCCACCCAGAAGTACCGGCAGGTGGTGATGAACGCGTTCATCAAGTGCGAGGGCGGCGGCTACGACTACGAGAATCCGGAGCAGTACCGGGCGCACCTCACCCGCGACAAGGTGGAGTTCATTGAGCAGAACGAGGAGTTCCTCGAGCAGTACCAGACGATGACGTGCCGGTGCTGCAACAAGTACTTCAGCACCTACAAGAACTTCATGGCGCACGTCCGCAAGAAGTACCCGCTGCTGCCGCGCAACCTGTGCTTCAACTGCCTCAAGATGAACGACTCCAAGGCCCTGTTCATCTCCCACCTGAAGAAGAGGAACTGCATCAACCTGTACCGCGTGCTCCACGGCATCCGGGAGAAGGCCAACGCGACAGTCTCCAAGGACGGCACTCTGACCGAGGCGGGCGATGGCCGAGTGTCCCACCTGGAGGCCGGCTCCAGTCCGAATGTGACCGGCGACGTAATCTCCAGTGCGGCCGGGTCGGAGCGACCGGAGAAGCTGCGGGCCAAGGAGCTGCTGGTGAACAAGCTGTACGAGTGCAAGCTGTGCCCCAAGGGCTTCCGGACCAAGCACGAGTTCCGGACGCACGTCTACGACAAGCACGCGGACGTCCAGCGCAAGGACAGCAACTCGATCCAGTGCAACTTCTGCGGCCTGGACTTTGCCGACCCGGTGGACAGGCGGCGCCACTACAACAACATGGACTGCATCGTGCGCCTGCGCTGCATGACCTGCGACGCCAAGCTGGAGACGCACCAGCGCTTCCTCGAGCACGTCTACCAGGACCACCTGGGCGGTGTGGGCGGCGGCAGCGGCACCGGCGGCGGGGGCGCCAGCAGCGACAACGCCTCCACCACCGGCAACAGCATGGAGCACTCGCCGGGCAAGCGCAGCCTGCTCAGTGCCCTGGGCATCGGAGTGGGCTCCTCCGCGGACGAGTCGCGCAGCAGCAGTGTGGCCCTCGGGCCGATGACCTCCACGCCCAAGCCGGGCAATCAGCAGCATTCTTCTGCAGCTGCTACCGGCGGCGGCAATGGCTCGGCCCCGAAGTCCCAATACTTCTCCCGCATGCCGCAGGTCTGCCCCATCTGTGGCCAGCAGTACAACAACTACAACAACGTGCTCCGGCACATGGAGTCGAAGCATCCGAACAAGCTGCCGGAGACGTACAAGTGCGTGCGGTGCGGCCTGGGCTATCCGAGGATCTCGTACCTGCGGGAGCACATGATCAACGTGCACGGGGTGGACAAGAACCGGCACTCGGGCGGCTTCGAGTACATCGTGAACGCCGATGCCGTCAAGCTGGCGGACGGGAGCACCCCGAACGTGTACACCGGTCGCTACGACTACGTGATGAAGGACCTCATGTCGATAACAAATGGTGGGACCCTCGATGACGACGACGAGGAGCCGGGCAGCGTGGCCAAGAAGATGCGCCTGGACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAACCACATGCGCTCCCACTACACGGCCTCCAACTCGGTGAACGCCGCCCTGACGGCGGCCAACCGGATGACGCCCAAGTCCCTGACCATAACGGCCACCCCGGCCGACACCAGCATGGAGTTGCTAACTGGGGGCTCATCCACGCCCGCGGCGACATCAGCGGCGGGAGTGCCACCCGCCATGGCCAACCAGACGCCGCAGGAGCAGGCCGTGTTCCGGCGCAGCCTCGACCAGGCGGCCGACCGGCGGTTCCGGCGGATGCGCTGCCGCATCTGCCAGCGGCGGTTCAGCTCGAAGAAGTCCTACCGCTACCACATGCTCACCGACCACCAGGTGCAGAACGTGCAGTTCATCAAGTGCAAGCTCTGCAACGCCGAGTTCGCCTACGAGAAGGGCCTCAAGGTGCATCTCTTCAAGGTGCACGGGCGGGCCATCAAGGACGAGATGATCGTGAAGCAGTTCGAGTGCGAGGTCTGCTCGATTGTGTACAGCTCCGAGATGGAGCTGCAGCAGCACAAGCGCAGTGTCCACAAGATGTCCTCGGCATCGGCATCGGCAGCAGCGGCCTCCTCCTCCTCCTCGAAAATGGACGACGACAGCATAGTCGTGGATGACAGCACCCTGAAGCCGGCGGGCGGCGGCGACCTGACAGACGCCTCCGTCAACGTCAGCCTGAGCACGCCGCTCTACTGGTACCAGTGCAAGTACTGCCCCTCCAACTTCAACACCAACAAGAAGCTGGCCATCCACATCAACTCGCACGACGAGTTCGACTCCAACGACTACTCCTGCAAGGACTGCGGCAACGTCTACAGCGGCAGGAAGAGTCTATGGGTGCATCGCTATAAGAAGCATCCGCAGGTGCCAGACCCGGCCGAGTGCTCGCTCTGCCGGAAGATCTTCTTCGACCGCCAGATGCTGGACAACCACACGCCGACGTGCAACCGCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGGCCTGCACTCGGGCATCTTCCGGCACAAGACCGGCGACGATGAGGACGAGGAGGACGAGGATGAGCAGCACCAGAAGCTGGCCGATGGAGCGGCCGACAGTGGAGCAGTTGCTCCTACTCCAGCTCCGGCGCCGGCCACCACAACGACAACCTCGGCCACCGCGATCAAGATACGCATTCCAGAGGTGGCGTGCACCATTTGCGGGGCCCGCTTCACCGACCAGGAGATGTTCACCAAGCACATCCAGAAGCACGAACAGGAGCTGTACGTGGACAATCCCCTGGCGGCGATGTTCGACGATGGGCCGCCCGACGCCGGCCAGTTTCAGGTGGAGCTAGAGAAGCAGAACGAGAACGGGGAGTACGCGTGCGATCTGTGCGCGAAGACGTTCCCCCAGGTCATAGCACTCAAGGTGCACCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCCCATCGACGGCGAAGCGACACATTTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAGCGGAAGCGTGAACTGAAGTGCGAGTACTGCCCCTCGACGTTCATCAGCAACAACAACCTGCGCCGGCACATGTACGAGCTGCACAAGCACGAGGTGAGCAACCTGCCGGAGCCGCCGGTCATCGTGGTGGACGACCATCTATCCTGCCGCCGGTGCAACCTCAAGTTCGAGACGAAGGAGCTGTGGATCGACCACAAGCTGGCGGACGCCAAGGTGGTGCGGCCGTTCTGCCCCTTCCAGTGGGGCTGTGATTTGTGCGGCGAGTACCTGTCGCGCAAGGAGAAGCTGATGAATCACATCAACAACCATCTCAAGGAGGAGGTCATTGTGCCGGTGGCCACCAAGGAGGCGGCGGAGAGGGCGGCAGCGAAGCCGCAGGAGGCGGAGTCAGTAGCGGTATCGAATGCCACCGCTAAGATGGAGGAGCCGGATCAGAAGGCGGACGTCGGCAAGTCGGTGGGGAAGACTCAGCCGGACAGCGATGATCTGGACGAGGAGGACAGCTCCGGCGAGGAGGAGACCTCTGGCACGGGCGATGACGAGGACGACGATGATGAAGACGACTCGGAGGAGGATGTGGAGGACGAGGAGGACGACGATGGCGATGGCGGCGAGGGCGAGGACGAGGAGGGCGTCCTCCCGCAGCAGCCCCCGCCGCCCAAGATGAACCTCACCCAGGACGATGATCTGGTCGAGGAGGTGCTCAGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAAGACCCCCAGCCGGTGGTGATGAACGGCAAGGCGAAAATGCCGCCGCTCATTGTGGCCACATCGGACGAGGAGGATGAGGAGGACGGCATGCTGCCCATCGAGGACATAATCGAGGAGGAGTTCGACGAGGACGCCGCCGATCCGGAGCCCGAGGACGACATTGTCGAGGAGGACGAGATTGAGGAGGATGAGGTGGAGGTGGAGGAGGAAGAAGAGGAGGAGGAGGAAGAGGTAATCGAAGAACTCGACGACGACATGGACGAGGTGGGCAACGAAGGGCGCAACTCGTCGTCGGCCAGCGAGTCGAACACAACCGCCACCACCACGACCACGTCCCAGTCACAGTCACATTCCACGGGAGCTTCTCCAGAGCCACATCAAAAGCCATTTCCTCAATGGGCCAAAGCTGGCCAAAGCCAAGGTGGTAGCCGGAGGAGGAGTAGCAGTAGCAGCATCATCCTTAACAACGGAACCGGTGCCCTCAAAGACGACATCGACAACGACGAGCAGTACGACGAGTACCAGTAG
Protein Sequence
MLSSWPVVWSSRVESKAGVVRGTLITPQDRLSLQICHACISYLNSWQSFKNRSLISQTKQRQWLEANNSSSIHKSKLLNYLDLNSAENGSASDHHHHQQRQNQNQNQNQQHVLENEDETDNAGIPGAAATAAAILDGIPSLKKRKSLTVYRCHHCRRCPLLLPLPLLLRPPSPLPPPPAPPPPPPSAAAGAGASNPPPAGVAGGRESLSVALPLDFSQASCSSSSNRLSGLLLQQQQPSAAATGAAPPSASASTSATVSASASASAPLLMPPLPAVPIKDEPIDTDDDYQMKSIDESDDMVDPTMFLERSEHEGDMPLMTSDYDYTAQHGVTAASAAASLPANAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPHNTPITKPTPALAAALEIQRAAAEAATAEANRAAGAAGGNISTQKYRQVVMNAFIKCEGGGYDYENPEQYRAHLTRDKVEFIEQNEEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLHGIREKANATVSKDGTLTEAGDGRVSHLEAGSSPNVTGDVISSAAGSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDSNSIQCNFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLEHVYQDHLGGVGGGSGTGGGGASSDNASTTGNSMEHSPGKRSLLSALGIGVGSSADESRSSSVALGPMTSTPKPGNQQHSSAAATGGGNGSAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEEPGSVAKKMRLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSNHMRSHYTASNSVNAALTAANRMTPKSLTITATPADTSMELLTGGSSTPAATSAAGVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECEVCSIVYSSEMELQQHKRSVHKMSSASASAAAASSSSSKMDDDSIVVDDSTLKPAGGGDLTDASVNVSLSTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCRKIFFDRQMLDNHTPTCNRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGLHSGIFRHKTGDDEDEEDEDEQHQKLADGAADSGAVAPTPAPAPATTTTTSATAIKIRIPEVACTICGARFTDQEMFTKHIQKHEQELYVDNPLAAMFDDGPPDAGQFQVELEKQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATHLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKRKRELKCEYCPSTFISNNNLRRHMYELHKHEVSNLPEPPVIVVDDHLSCRRCNLKFETKELWIDHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKEAAERAAAKPQEAESVAVSNATAKMEEPDQKADVGKSVGKTQPDSDDLDEEDSSGEEETSGTGDDEDDDDEDDSEEDVEDEEDDDGDGGEGEDEEGVLPQQPPPPKMNLTQDDDLVEEVLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDPQPVVMNGKAKMPPLIVATSDEEDEEDGMLPIEDIIEEEFDEDAADPEPEDDIVEEDEIEEDEVEVEEEEEEEEEEVIEELDDDMDEVGNEGRNSSSASESNTTATTTTTSQSQSHSTGASPEPHQKPFPQWAKAGQSQGGSRRRSSSSSIILNNGTGALKDDIDNDEQYDEYQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00488153;
90% Identity
-
80% Identity
-