Basic Information

Insect: Drosophila pseudoananassae
Gene Symbol: L
Assembly: GCA_018153035.1
Location: JAECXR010000001.1:7198723-7204898[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 3e-05 0.0021 18.2 2.9 1 23 156 178 156 178 0.98

2 17 0.13 9.2 6.8 7.3 1 23 184 206 184 206 0.97

3 17 1.4e-07 1e-05 25.5 3.2 1 23 212 234 212 234 0.99

4 17 1.1e-05 0.00075 19.6 0.4 1 23 240 262 240 262 0.99

5 17 0.01 0.73 10.2 0.2 2 23 344 368 343 368 0.92

6 17 0.0013 0.091 13.1 0.4 2 23 389 411 388 411 0.96

7 17 0.052 3.7 8.0 0.7 1 23 490 512 490 512 0.97

8 17 0.0037 0.26 11.6 0.1 2 23 520 541 519 541 0.92

9 17 3.6e-05 0.0025 18.0 0.5 1 23 549 573 549 573 0.95

10 17 4.2 3e+02 2.0 0.9 2 23 609 631 608 631 0.94

11 17 0.0021 0.15 12.4 1.1 1 23 677 700 677 700 0.97

12 17 0.0042 0.3 11.5 1.2 2 23 869 891 868 891 0.96

13 17 0.034 2.4 8.6 0.1 1 23 897 919 897 919 0.92

14 17 0.29 21 5.7 0.2 2 23 927 948 926 948 0.95

15 17 0.63 44 4.6 0.5 2 23 1052 1073 1052 1073 0.94

16 17 0.0063 0.45 10.9 0.0 1 23 1083 1105 1083 1105 0.96

17 17 5.9e-05 0.0042 17.3 1.0 1 23 1112 1134 1112 1134 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	3e-05	0.0021	18.2	2.9	1	23	156	178	156	178	0.98
2	17	0.13	9.2	6.8	7.3	1	23	184	206	184	206	0.97
3	17	1.4e-07	1e-05	25.5	3.2	1	23	212	234	212	234	0.99
4	17	1.1e-05	0.00075	19.6	0.4	1	23	240	262	240	262	0.99
5	17	0.01	0.73	10.2	0.2	2	23	344	368	343	368	0.92
6	17	0.0013	0.091	13.1	0.4	2	23	389	411	388	411	0.96
7	17	0.052	3.7	8.0	0.7	1	23	490	512	490	512	0.97
8	17	0.0037	0.26	11.6	0.1	2	23	520	541	519	541	0.92
9	17	3.6e-05	0.0025	18.0	0.5	1	23	549	573	549	573	0.95
10	17	4.2	3e+02	2.0	0.9	2	23	609	631	608	631	0.94
11	17	0.0021	0.15	12.4	1.1	1	23	677	700	677	700	0.97
12	17	0.0042	0.3	11.5	1.2	2	23	869	891	868	891	0.96
13	17	0.034	2.4	8.6	0.1	1	23	897	919	897	919	0.92
14	17	0.29	21	5.7	0.2	2	23	927	948	926	948	0.95
15	17	0.63	44	4.6	0.5	2	23	1052	1073	1052	1073	0.94
16	17	0.0063	0.45	10.9	0.0	1	23	1083	1105	1083	1105	0.96
17	17	5.9e-05	0.0042	17.3	1.0	1	23	1112	1134	1112	1134	0.97

Sequence Information

Coding Sequence: ATGATGGCCCTAAAGATGTTATATCGCGGTCCCAGTTCGCGTTTGGAGAATTTAATTGAAAAGATCCAGGCTACGAAGGAGATAACCAATAACGATATGTATAGTACTCACACATCGTCCAGCTACTCACCCAGCATCTCGGACGGCACCATGACTCCCAACTCGCACCACTTGCCCGGTGCTCCAGCCAATCTCCCCAGCCAGGAGCAGGATCACCCGAGAGAGGGAAGCACCAACGGAGGATTGGATGGCGAGGACTTGGTCAAGCCGAAGCGTCTGCCCCATTTCCATCATCATCACCACCACCACTACCACCACCAGCAGGCCCTGAAAATCGCCAACAAGCTGCGGAAAATCAATAAGGAAGCCAAGCTGGGAGCCCTGGGAGGGGCGGGAGCCGGAGGAGTTGGCTCCAAGTTTGATAAGTTGACGGGCGAGGGGATTAAAAGTCGCGGCGACGGCTCCTATCAGTGTCAGTTCTGCGAGAAGTCATTTCCGCGACTCGGTTACTTGAAGCATCACGTGCAGAGCCACGCCGAACACCTGCCCTTCAAGTGCGAGTACTGCTCCAAGCTCTTCAAGCACAAGCGCTCCCGGGATCGCCATAAGAAGCTCCACACCAACGAGAGGAACTACAAGTGTCCTCATTGCGAGGCTGCCTTTTCCAGGAGTGACCATCTTAAGATCCACATGAAAACCCATGACATCCAGAAGCCCTTCCAGTGCAGCATGTGCAACAGGGGCTACAACACGGCAGCGGCCCTGACCTCCCACATGCAGAAGCACAAGAAGAACGCCGCCATCCTGGCAGCTGGAGGCAATCCCAATGCCCTCAACTACAGTCCACGCTCCACAGGATCTGCCTCGGCCTCGGTCTCCAGCAACGGGAGCCTGCACAAGAGGAGGTATGCCCTGGCCCTGGCCACGGACAGCAGTCCCAGCCGCCTGGACTACCCCCAGAAGAGGTCGAGGAGTGGCACCACGTCCACTGCCGCCGCCACAGCTAACGCAGCACCCACGCCTCTGCTGAGGTGCAGCTACTGCCCCAAGGTGACGGAGTTCAGCAGCCTGGAGCAGTTGAATGCCCATCTGCAGAGTGTCCACGAGCAGCCCCAGCAGCCGCCGGTGAAGACGCCCAACCAGGAGGCGGAGGGCTTCCAGCTGAGCTGCGAATACTGCACCATGAAGTTCGGCAACATAGCCGGCCTCTTCCAGCACATGCGGAGCACTCACCTGGACCGGCTGAGCAGCCCCAACTCCTATTACGAGCACTTCAATCGGCTGGCCACCGCCGGCACCTTCAGCCCGCGCCTGGCCCTGGATCTGCCCAAGATCAAGCCGGACCTGGGAAGCCCCGATCTACGGGAGCTGCGACCGGCGGAGGAGGACCTGCCCACGGACTTGAGCAGCAACAAGCGGCGACCCCTGACCCCTAACCCGCAGCCACCACCCGCTCCCCCTGGCGTCTTCTTCTGCAATCAGTGCAACGCCGGCTTGCCCGACTTCGAGAGCTTCAGGAATCACCTGAAGAGCCACATCGCCGAGGGCATGCAGCAGGTCTGCCCGCACTGTGGACTGAGTCTGCCGGAGCAGTCTGAGTTCGAGCGCCATGTGGTGGGCCACTTCCTGATCACCGGATCGGAGTTCAACTGCAGCTCCAGCTGCGGCAAGAGCTTCGCCAAGTCGGAGGACCTCCAGCAGCACCTCCTCACTGAGCACGTCCTCACTCTCCTGAAGTGCTCCCTGTGCTCGGAGCTCTGCGAGAGCCGCATGGCCATGCAGCTCCACCTGGCCTGTGCCCACAGCCAGGAGACCAAGCTGCTTCGCTGCAGCGCCTGCCTGGAGTTGTTCCGCTCGGATGCCGAGTTCCACGTGCACGTCAAGACGCGTCACCAGCTGGGCGGACACCCCGCCCTAGGCAGTGCCACTGCGAACGCCCCCTCCAATCCTCTCCAGTGCATGTTCTGCCGAGTGGTCTGCTCCTCGGAGCTGGAGATGCACTTCCATTTGGCGGCCCATGCCCGCCAGTTCCGGTGCCCCTCGTGCCCTGAGACCTTCCACGTGGAGTTCCTGCTGGATCGCCACATGCAGAGCCAGCACGGTGGTGTCGGAGGAGGAGCAGGCGTGAAGGACAAGGAGGCCAGTTCGCCCAACATGAACAGCCTGTACGTGAACGCCTTGCTGCCACCACTTGCGGCAGCTGCAGCGGCTGCGGCAGCCACCAACAACAACAGCAGCATCATCGACTACAACGTGGCATTTAAGGGATTGTTTGGCGGAGCAGCCGGAGGAGGAGGAGGGTCAGGAGCACCCCCTGCCCCCTCGTCCAAGTTCTACAGCCCGCTGCAAGTGGACACAAACGCCCTAAAGGCACAGACCTCGCCCCACCCGGCCCTGATGTACGGACTCAGTCAGAGGTACTTGATGGAAATGTACGCCGCCAAGTCGGCCTCTCCTCCTGGAAGCGAGGGCGGAGCCAGTGGGCAGGCAGCACCACCTACAACCTTTAGCTGCGGAATGTGCGAGCGGCAGGATCTGAGGAGCGAGGCGGAGCTCCACTCGCACCGCAAACTGGCCCACAACCTGAAGACCGGCGTGAGCCTGAGGTGCGCCTACTGCGCCGGAAACTTCAAGTCCCGGGCGGAGCTGGAGCAGCACATGAAGAGCTGCCACAACTCCACGGGCAAGCACAAGTGCTTGATCTGCGACGAGGTCTTCCCCTCGCCGGCCATCCTGGCCGAGCACAAGCTGCAGCACTCCAAGGTGGGCCAGTCGGGCAAGTGCTCGCACTGCGGCCAGCTCCTGGAGGACGTGGCCGCCTTCCGGGCCCATCTCTCCGAGCACGGCAGCGACGGGGCCTCCCTGCCCCTGGCCTGTATCTGCTGCCGCCAGACCCTGCACTCGGAGTTCGAGCTGAGTCTGCACGCCAAGTTCCACACCAAGTCCGCGTCCAGTGGCGGCAGCCTACAGGAGCCAGTGTGTGCCCTGTGCCTGGAGCCCCTGCCGGACGCCACCGAGGGTCCTGCCAAGCTGTGCGAGAAGTGCTGCCGAAAGCACAACCTCAATGGGAAGAGGAGCAAGCCTCCGAGTGAGCCGCCAGTCCAGAGTCTGCAACCAATCCAGCCGCCATCCGGGGCAGCCTTTGTGGAGAACCGTTGCAACCTGTGCAAGATGATCCTTCCGCACGCCCAGAAGCTGCAGGAGCACCTGGTGGAGCACACCTTTGCCGGCACCGAACAGCGGGGCTACAATTGCTACATCTGCTCCGCGGTCTTCACGGCTCCTGGAGGTCTCCTCAACCACATGGCGGAGCATGGCGCCCACACGCGTCCCTACGACTGCAACATCTGCCCGGAGAAGTTCTACTTCCGGGCGGAGCTGGAGCACCACCAGCGGGGCCACGAGCTGCGACCCCAGGCACGCCCCAAGATGGAGGTGCCCTCAAACAGGACCAGTTCCTCGCCCATCGACAGCCCCGTGAGGAGTCCCACGATCGTCAAGCAGGAGCTGTACGAGACGGATACGGCTCAGTCGGCCGGAGGGGATGAGGACGAGCCGGAAAACGCCCACGACGACGAGGAGTACATCGAGGTGGAGCAAATGCCGCACGAGGGGCGTCCCAGCGAGTTGGAAAGGGCCACCAGTAGCGCCTAA
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKEITNNDMYSTHTSSSYSPSISDGTMTPNSHHLPGAPANLPSQEQDHPREGSTNGGLDGEDLVKPKRLPHFHHHHHHHYHHQQALKIANKLRKINKEAKLGALGGAGAGGVGSKFDKLTGEGIKSRGDGSYQCQFCEKSFPRLGYLKHHVQSHAEHLPFKCEYCSKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASASVSSNGSLHKRRYALALATDSSPSRLDYPQKRSRSGTTSTAAATANAAPTPLLRCSYCPKVTEFSSLEQLNAHLQSVHEQPQQPPVKTPNQEAEGFQLSCEYCTMKFGNIAGLFQHMRSTHLDRLSSPNSYYEHFNRLATAGTFSPRLALDLPKIKPDLGSPDLRELRPAEEDLPTDLSSNKRRPLTPNPQPPPAPPGVFFCNQCNAGLPDFESFRNHLKSHIAEGMQQVCPHCGLSLPEQSEFERHVVGHFLITGSEFNCSSSCGKSFAKSEDLQQHLLTEHVLTLLKCSLCSELCESRMAMQLHLACAHSQETKLLRCSACLELFRSDAEFHVHVKTRHQLGGHPALGSATANAPSNPLQCMFCRVVCSSELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGGVGGGAGVKDKEASSPNMNSLYVNALLPPLAAAAAAAAATNNNSSIIDYNVAFKGLFGGAAGGGGGSGAPPAPSSKFYSPLQVDTNALKAQTSPHPALMYGLSQRYLMEMYAAKSASPPGSEGGASGQAAPPTTFSCGMCERQDLRSEAELHSHRKLAHNLKTGVSLRCAYCAGNFKSRAELEQHMKSCHNSTGKHKCLICDEVFPSPAILAEHKLQHSKVGQSGKCSHCGQLLEDVAAFRAHLSEHGSDGASLPLACICCRQTLHSEFELSLHAKFHTKSASSGGSLQEPVCALCLEPLPDATEGPAKLCEKCCRKHNLNGKRSKPPSEPPVQSLQPIQPPSGAAFVENRCNLCKMILPHAQKLQEHLVEHTFAGTEQRGYNCYICSAVFTAPGGLLNHMAEHGAHTRPYDCNICPEKFYFRAELEHHQRGHELRPQARPKMEVPSNRTSSSPIDSPVRSPTIVKQELYETDTAQSAGGDEDEPENAHDDEEYIEVEQMPHEGRPSELERATSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00548267;
90% Identity: iTF_00615690;
80% Identity: -