Dpse005633.1
Basic Information
- Insect
- Drosophila pseudoananassae
- Gene Symbol
- dsx
- Assembly
- GCA_018153035.1
- Location
- JAECXR010000024.1:5454268-5461011[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-24 5.8e-21 73.9 10.4 2 47 41 86 40 86 0.97 2 2 4 1.6e+04 -11.1 8.6 10 21 140 151 138 153 0.83
Sequence Information
- Coding Sequence
- ATGGTTTCGGAGGAGAACTGGAACAGCGACACCATGTCCGACTCGGACATGATTGATTCCAAGAACGATGTGTGCGGAGGAGCCTCCAGTTCCAGCGGCAGCTCCATATCGCCGCGAACACCGCCCAACTGCGCCCGCTGCCGCAACCACGGCTTGAAGATAACCTTGAAGGGCCACAAGCGGTACTGCAAATACCGCTACTGCACCTGCGAGAAGTGCCGGCTCACGGCGGACCGCCAAAGAGTGATGGCTTTGCAGACGGCCCTGAGACGGGCCCAGGCCCAGGACGAGCAGCGGGCGCTACACATGCACGAGGTGCCGCCGGCTACACCAGGCACTTCCTCTCTGCTCAGCCACCACCACCACGCCGCCGCTGCCGTCGCCGCCGCGCCCGCTCACGTCCACGCCCATGCTCACATGCATGGCGCCCATCATGCCGCCCACGGACACCACTCGCACCATGGCCACTTACTGCACCACCAGCAAGCGGCAGTGGCAGCCGCAGCGGTGGCACCACCATCCCACTCGGCCGCCACTGCAGCCAGTCTGCACGGCCACGCCCACTCCCATCACGTGCACATGGCCGCAGCGGCCGCGGCCTCAGTACAGCACCAGCACCACCCCCACTCGCATCACCCCCACCACCAGCAGCCGCCGCACCACCAACATCCGCAGCCGCAGCAAGGCGCCCTGCGATCGCCGCCACACAGCGACCACGGCCCAGCTACCAGCAGCTCCGGAGGGGCGGCCAGCTCCAGTAGCAGCACAGCTGCCACATCCAGCAACGGATCCAGCAGTAACGGGGGAGGAGGATCTGGCGGCTCTGGCCCCGGATCTGGAGCAGGAACCAACGGAGGAGGACCCCGGGCTGGCAGCAGCGGCACCTCAGTGATTACTAGCGCCGACCACCACATGACCACGGTTCCAACTCCTGCCCAGTCGCTGGAGGGCTCCTGCGACTCCTCGTCACCCTCGCCGTCGTCCACTTCCGGCGCCGCCATTTTGCCGATCTCAGTCTCCGTCAACCGGAAGAATGGTGCCAACGTGCCATTAGATAGTTTGGCCGGCAAGGAACAAGTTCAGTCCACCTCCCGGTTCCTGGTTACGCCAATGCGCACCCCAGACTACTCCCCAGACTGCTCCCCAGACTGCCGTCTAATTAAGCCAAATGATCGGCGGCGATGA
- Protein Sequence
- MVSEENWNSDTMSDSDMIDSKNDVCGGASSSSGSSISPRTPPNCARCRNHGLKITLKGHKRYCKYRYCTCEKCRLTADRQRVMALQTALRRAQAQDEQRALHMHEVPPATPGTSSLLSHHHHAAAAVAAAPAHVHAHAHMHGAHHAAHGHHSHHGHLLHHQQAAVAAAAVAPPSHSAATAASLHGHAHSHHVHMAAAAAASVQHQHHPHSHHPHHQQPPHHQHPQPQQGALRSPPHSDHGPATSSSGGAASSSSSTAATSSNGSSSNGGGGSGGSGPGSGAGTNGGGPRAGSSGTSVITSADHHMTTVPTPAQSLEGSCDSSSPSPSSTSGAAILPISVSVNRKNGANVPLDSLAGKEQVQSTSRFLVTPMRTPDYSPDCSPDCRLIKPNDRRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00591715;
- 90% Identity
- iTF_00475946;
- 80% Identity
- -