Basic Information

Gene Symbol
Trerf1
Assembly
GCA_018153035.1
Location
JAECXR010000024.1:3665947-3678547[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-08 3.8e-05 23.5 0.1 2 45 1611 1654 1610 1655 0.93

Sequence Information

Coding Sequence
ATGGCTGCCATAAATACGGTACCCAAGAGCATACACCTGCCACTGACAAGTCTCAGCAGCGCGCCCCGCGTGTTGATGTGCAGCGCCTCCGTGGGCACCGAGGGATCCGTAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGACGCTAGAGAATGCGCTGACAATTGGCTATCCGGATCCGGAAATGTTGGCAGATGTCTTGGGCACCATTCAGACAGCCTCTCTTAAAAACAACAGCAACTCAATCACAACAGCAACCTCAAGCAATAGTTCTAGCAAATCGACTAGCAGCAATCCAGTGGGCAATACCAATAAAATAACCATAACCCGGCCGAACGGCGTTAGCTCATCGGTCGGAGCGTCCTGCCACAGTGGCACAGTCACTGGCGTCAGTGGGATCATCAGCATCGAAGCACCGCGCAAGAACCGCCCTAAACTATCCTCACCGACGCGACACGGACCGCAGCAGTGCCAGATTTGTTGCAAGATCTTTGGAAATGCCTCGGCACTGGCCAAGCACAAACTGACGCACAGCGACGAACGGAAATACATCTGTGCGCTCTGCTCGAAGGCATTCAAGCGGCAAGATCACTTAAACGGACACATGATGACTCATCGGAACAAGAAGCCTTACGAATGTAAGGCGGATGGCTGTGGAAAGTCCTACTGCGACGCACGATCTCTGCGGCGGCACTCGGAGAACCACCATGCAGGTGGTGCGACCACGCCCACCACCAGCCAGTCCCTCTCGCCCATCGCCAGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCGCCGGCGACGGCCAGCGGGGATGCCAGTTCGCCGGACGGTGCCACCTGCATACGCACCTACATTTCCACAGGCAACTCGGTGGTGGATGCTGCCACTGGGATAGCTCTGTCGGATGAGCAGATCAAGGCCATGAACCTGCCGATCAAAACGGGCGTCACACTGCTCTCGCCAACCACTTCTACTTCCTCGAACGCCTCCTCCACGGCCAGCAGCTCCGGGTCTTCCTCGTCCTCTGCCTCCGTGGCGACGGCCTCGTCGACGGCCAGCCAGAGTGCGGTGATAGCCACCACCAGCTCCCCCACCATAACGCTCAGCGACGGGGTGAGCCTCGAGGGCGAGGGCCTGACCCGCGAGCAGCTGGATCTCATCAGCAAGATCATGCAGCAAACGAAGCAGACGAGTGCCCAGGTTACCGTCTCCTCGCCCACCAGTGTCAGCTCCTATAAGATCAATACCAATTCTGCGTCGACACAGTCGAGGCCGCGCACCTGGAACATGCAACTGCTGAACAATTCCCAGAATGTGACCGTCACCGTTGAGGATAATACCGACATGGTGGCTCCCTCTTCCAGCTCTCCAGTGGAGATTAAGGAGGAGGAGCTCAACCAACAGATTGTGGCCGCCATCAACCCCCACCTGCTCAACATTGTGAAGCTCGACAAGCCGGTCGAGTGCAATCTCTGTCACCGTAAGTTCAAAAACATACCCGCCCTCAACGGGCACATGCGCCTCCATGGCGGCTACTTCAAAAAGGATCCAGAAACCAGGCGCAACGAGAAGAAGGATTCAAGTGGTCCGCCCCTGCAGACGGCCAGTATTGGTGTTCGTGCTCTAATCGAGGAGAAGATTATAAGCAAACGCAAGGACATCACAAAGGGCTCCTTTGTGGTTCCTGCCCCACCGCATAGCAGTGGCATCACCACTCCACTGAGGCGTTCCATTAGCGACCTGGAGAGCTTCCTCAATCCCAAGAGCAGCTCTAGTGGACAAACCCAGACACTGGCAACTAGCACGGGCTCCACCACGGCCGTTCTTCCGGCAGCCACCACCATAAAGAGCAGCAATGGCTTGAGTATCCAGCAGATTGGACTGCCCCAGAGCATCGAGATCTTCAGCGGTGGCCAGAAGCAGTCCAAGACCCTGAATTTGGGCAGTGGCACCAACACCATCACCATAACCACCAACAACGTGCCCACCACCACCACAATGAGTGCCCTGACCGCCTTGAAGGCCGGCGGGACCATCAGCGGCATATCCACGGCCACCAACACGGATCCTAAGGATTCCACCCTTATAGAGCTCCTGAAGCGAGGCACTCGCATTGCGGTGACCTCGAAGAAAACCCAGTCTCAGAGCCAAACTGGGTCCAGTGTCCTAATGACCTCCAGCGCCTCAGCAACGAGTGCCATGGGTGCTGTTACGGAATTGACCACCATTGGAGGCAACAGCCTGCAGACAGTTGGACGCCAGATTATCACAAACAACAACCGCACCGTGATCATCCCCTCCGATGTTCAGGTGGTGTCGACCAAGAGCAAGCTGAGCACCTTGAGTAGTCTGGTCAAGAGTAGCAGCACCTCCACCGTCTCGAACAGCGGCTCTAACACCAGCTGCACATCGGGTAACATTTCCCTGGCCGATGGAACGCCTCTTTCTCTGACCATAACTCCCAACCAGGAGATCTCCAGTGGTGGTACATCATCGGGCGGTGTCATCACAAGCGGCGGGGGTGGAGTATACACAGTGACCTACACCAGCGACGGAACCGATCTATTCGACGATGCCGAAGTCTACAATGTCACCGATACGGAGATGCTGCTGCAGACGGTGGACTCCATGGAGCTGCTCCAAGACGACGAAGACGACACACAGATCAAGAGCGAACATTCCGAGGACTTTGCACTGCTGAGTGATGCTGGGGACAGTGTGCACACCCAGCTGGTCAAGCTGGACACGGAGAATATATCCGGATCGGGTAACACTGGAAACAGCAACACCACCACCACCAACGCCAATACCACACCGCTGCCCACCTTCCAACAATTCCATTCCAAGGAACTGATCATGCAGAACAGTTCACAGATTCAGGCAATAGCCAGCATGCGGAGCAGTAGCGGTGTCCTGGCCTCGCCGCTTCACTCGCCCCTGGCCTATCCCACGCCACCTTCGAGCCACGAGAACATGGCCCAGAGCTCCCCATTCATCGAGGATGCAGCTGCCCAGTTTGTGGATGCCAGCAACACTTTCTTCGGCGACAAGACGGACTTCTCGCATATATACTTCAAGACCGACGATGGCCAAGCTACCATCGAGCAGCTGGACGAGCAGGACAATGAGAAGATCCTGAAGCTCAAGTCGGTTCTGGAGGAGAGTAGCTTCGATCCCTCCATCAAGGTGGAAGACCTACTGAATGGCACGGACGACGACACCGAGTGTGATCTGAGGGAGTTTGCCGAGACAAATCTCTCGTTTCTGGACGAGGACCAAGAGTTCCTCAACGATTCCCGTAATGCCACTTCTCCGCTCTCAGAGTCGTTCTTCACCAGCGGCATTGGTTCGGCTGAGGATGTGAAACAGGTCCTGCGAGAAGTCCTGCCCGATGAGAATATGCAGTTGCAGATGAGCAGCGAGCAGCAGGGCGAGAATATAATCGATCTCTACTATCTACCCGGTTTGGGGCTGCAATCGCAGATGATGCCCAATTCGGAGGATCCTTTATTGTCCTCTTCGCCTAGGGAGTTTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATCAGCAGGCCGATTTTATGTTGCCCCTGGTGGGAGGTCATGGCTTTACGTCGCTGCCCAACCAAAACCAATTCCTGGACAATAGCCAGGGGGGCGGCATGGGATTGCAGCCCCTAAATAGCCTGCTCCAGCCCCTGCTCTTCAGCGGACCTAGTTCGAATAGCAATTTGGTTGCGGGCAACGATACCCACCTCCCCGCCGATTGCCAAATGAATACAAATCAGACAGCGCAGCTTGATGGAAGCTTGATGTTCGCCTGCGGCTCGGCAGTGGCGGTAACAACAGGCAACAAGCCCCTGCTCCCGGCCATGCCAACTCCAGTGGCCAATTTGCAACCGCTGTCGAACCAAACCAATTCCATTTTGAAGCGCCGACTGCGCTCGAACGCGCCCCAGGAAACGCACAAGTTCTCCAAGTTCCATACCCTATCGCCGCACCGCTCCAAGCTGCGTAAGCCATCCCGCACCCACTACACTCCCGCTCCCATCCTGAATCCGGACCGCAAGGGCACCGGACTCTACTGCAACGTGCGGAAACAGCTGGGCCAGGGTCTGTTCGATGCTTTCGATGATGACTTTGGGGACCCGGTGGGTCTGGTTGACTTCTCCGACGAGTCGAAGGTCAACCTCGGTTCGACCTACCAGGCGCAGATTCCCAGCTGCCGGCCCCAGGAGGAGGCGTTGCGTGAGGATGTGGGCGCGGAAATTATGTGGAATCCCGAAGTGCAGGAAGACGAGAAGATCCTGATGCGCTACATAGATCTCAGCAAGTCGTCGGCCGTGCCCATGGGCAGTCATTCCGAGGAGGTGGCCCTCCACACGCTGCTCAAGGCCCACGGGAACTCGGCGGCGGCGGTACTGAATCTGCTACAGACCCAGTCCGGCGCCTTTCAGATGAAGTGGAGTTCCCACGAGCTGGAGCAGTTCCTGCGAGGTCTGGAGAAGCATGGCAAAGATTTTGGCAAGATTGCAAATACGCTCCTGACAAAATCCTCTGGCGAGTGCGTGCAGATGTACTATTTCTGGAAGAAGCTGTGCGTGGACTACAAGGTATCGCACCTGAAGATGGAACCCGTGGTCGTGGTAACGCCCCCCGTGGAGAAACCCTATGTGTGCGAGATCCCCGACTGCTCAGCGAGCTTCAGTTCGAAAGCGGCACTGCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCTGTCCCGAATGCCAAGGACGGCGAATTCCCCTGCAAGGTGTGCGGCAAAGTCTTCAATAAGGTGAAGAGTCGTAGTGCTCACATGAAAACCCATCGGGTCCAGGAACCGGACCAATCTGCGAAACACCACCAGCAGCATCAAGTCAATGTCTCGACAGGATCTGGACTGGCCAGTGTCGCCTCGACTTCGACGATCGCATCGACGACATAG
Protein Sequence
MAAINTVPKSIHLPLTSLSSAPRVLMCSASVGTEGSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLENALTIGYPDPEMLADVLGTIQTASLKNNSNSITTATSSNSSSKSTSSNPVGNTNKITITRPNGVSSSVGASCHSGTVTGVSGIISIEAPRKNRPKLSSPTRHGPQQCQICCKIFGNASALAKHKLTHSDERKYICALCSKAFKRQDHLNGHMMTHRNKKPYECKADGCGKSYCDARSLRRHSENHHAGGATTPTTSQSLSPIASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPATASGDASSPDGATCIRTYISTGNSVVDAATGIALSDEQIKAMNLPIKTGVTLLSPTTSTSSNASSTASSSGSSSSSASVATASSTASQSAVIATTSSPTITLSDGVSLEGEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVSSYKINTNSASTQSRPRTWNMQLLNNSQNVTVTVEDNTDMVAPSSSSPVEIKEEELNQQIVAAINPHLLNIVKLDKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDPETRRNEKKDSSGPPLQTASIGVRALIEEKIISKRKDITKGSFVVPAPPHSSGITTPLRRSISDLESFLNPKSSSSGQTQTLATSTGSTTAVLPAATTIKSSNGLSIQQIGLPQSIEIFSGGQKQSKTLNLGSGTNTITITTNNVPTTTTMSALTALKAGGTISGISTATNTDPKDSTLIELLKRGTRIAVTSKKTQSQSQTGSSVLMTSSASATSAMGAVTELTTIGGNSLQTVGRQIITNNNRTVIIPSDVQVVSTKSKLSTLSSLVKSSSTSTVSNSGSNTSCTSGNISLADGTPLSLTITPNQEISSGGTSSGGVITSGGGGVYTVTYTSDGTDLFDDAEVYNVTDTEMLLQTVDSMELLQDDEDDTQIKSEHSEDFALLSDAGDSVHTQLVKLDTENISGSGNTGNSNTTTTNANTTPLPTFQQFHSKELIMQNSSQIQAIASMRSSSGVLASPLHSPLAYPTPPSSHENMAQSSPFIEDAAAQFVDASNTFFGDKTDFSHIYFKTDDGQATIEQLDEQDNEKILKLKSVLEESSFDPSIKVEDLLNGTDDDTECDLREFAETNLSFLDEDQEFLNDSRNATSPLSESFFTSGIGSAEDVKQVLREVLPDENMQLQMSSEQQGENIIDLYYLPGLGLQSQMMPNSEDPLLSSSPREFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQQADFMLPLVGGHGFTSLPNQNQFLDNSQGGGMGLQPLNSLLQPLLFSGPSSNSNLVAGNDTHLPADCQMNTNQTAQLDGSLMFACGSAVAVTTGNKPLLPAMPTPVANLQPLSNQTNSILKRRLRSNAPQETHKFSKFHTLSPHRSKLRKPSRTHYTPAPILNPDRKGTGLYCNVRKQLGQGLFDAFDDDFGDPVGLVDFSDESKVNLGSTYQAQIPSCRPQEEALREDVGAEIMWNPEVQEDEKILMRYIDLSKSSAVPMGSHSEEVALHTLLKAHGNSAAAVLNLLQTQSGAFQMKWSSHELEQFLRGLEKHGKDFGKIANTLLTKSSGECVQMYYFWKKLCVDYKVSHLKMEPVVVVTPPVEKPYVCEIPDCSASFSSKAALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPNAKDGEFPCKVCGKVFNKVKSRSAHMKTHRVQEPDQSAKHHQQHQVNVSTGSGLASVASTSTIASTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00488269;
90% Identity
iTF_00487939;
80% Identity
iTF_00580227;