Basic Information

Gene Symbol
Trerf1
Assembly
GCA_018153845.1
Location
JAECYF010000041.1:23405389-23418064[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-08 3.9e-05 23.5 0.1 2 45 1606 1649 1605 1650 0.93

Sequence Information

Coding Sequence
ATGGCTGCCATAAATACGGTACCCAAGAGCATACACCTGCCACTGACAAGTCTCAGCAGCGCACCGCGCGTGTTGATGTGCAGCGCCTCCGTGGGCACCGAGGGATCCGTAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTATCCGGATCCGGAAATGTTGGCAGATGTCTTGGGCACCATTCAGACAGCCTCTCTTAAAAACAACTCAATCACAACAGCAACCTCAAGCAATAGTTCTAGCAAATCGACTAGCAGCAATCCTGTGGCGAACGGCGTTAGCTCATCGGTCGGAGGGTCCTGCCACAGTGGCACAGTTACTGGCGTCAGTGGGATCATCAGCATCGAAGCGCCGCGCAAAAACCGCCCCAAACTATCGTCACCAACGCGACACGGACCGCAGCAGTGCCAGATTTGTTGCAAGATCTTTGGAAATGCCTCGGCACTGGCCAAGCACAAACTGACGCACAGCGACGAACGGAAATACATCTGTGCGCTCTGCTCGAAGGCATTCAAGCGGCAAGATCACTTAAACGGACACATGATGACTCATCGGAACAAGAAGCCTTACGAATGTAAGGCGGATGGCTGTGGAAAGTCCTACTGCGACGCCCGATCTCTGCGGCGACACTCAGAGAACCACCACGCAGGTGGTGCGACCACGCCCACCACCAGCCAGTCCCTCTCGCCCATCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCAGCCTCTCGCCGGCGACGGCCAGCGGGGATGCCAGTTCGCCCGACGGTGCCACCTGCATACGCACCTATATTTCCACGGGCAACTCGGTGGTGGATGCGGCTACCGGGATAGCTCTGTCGGATGAACAGATCAAGGCCATGAACCTGCCGATCAAGACGGGCGTCACCCTGCTCTCGCCCACCACTTCGACTTCCTCGAACGCCTCCTCCACGGCTAGCAGCTCCGGGTCTTCCTCGTCCTCCGCCTCCGTGGGGACGGCCTCGTCGACGGCCAGCCAGAGTGCGGTGATAGCCACCACCAGCTCCCCCACCATAACGCTCAGCGACGGGGTGAGCCTCGAGGGCGAGGGCCTGACCCGCGAACAGCTGGATCTCATCAGCAAGATCATGCAGCAAACGAAACAGACGAGTGCCCAGGTCACCGTCTCCTCGCCCACCAGTGTCAGCTCCTATAAGATTAATACCAATTCTGCGTCGACCCAGTCGAGGCCGCGCACCTGGAACATGCAACTGCTCAACAATTCCCAGAATGTGACCGTCACCGTTGAGGATAATACCGACATGGTGGCTCCCTCTTCCAGCTCCCCAGTAGAGATCAAGGAGGAGGAGCTCAACCAACAGATTGTGGCCGCCATCAACCCCCACCTGCTCAACATTGTGAAGCTCGACAAGCCGGTCGAGTGCAATCTCTGTCACCGTAAGTTCAAAAACATACCTGCCCTCAACGGGCACATGCGCCTCCATGGCGGCTACTTCAAAAAGGATCCAGAAACCAGGCGCAGCGAGAAGAAGGATTCAAGTGGACCGCCCCTGCAGACGGCCAGTATTGGTGTTCGTGCTCTGATCGAGGAGAAGATTATAAGCAAACGCAAGGACATCACAAAGGGCTCCTTTGTGGTTCCTGCCCCACCGCATAGCAGTGGCATCACCACTCCACTGAGGCGTTCCATTAGCGACCTGGAGAGCTTCCTCAATCCCAAGAGCAGCTCTAGTGGACAAACCCAGACGCTGGCAACTAGTACGGGCTCCACCACGGCCGTTCTTCCGGCAGCCACCACCATAAAGAGCAGCAATGGATTGAGTATCCAGCAGATTGGACTGCCTCAGAGCATCGAGATCTTCAGTGGTGGCCAGAAGCAGTCCAAGACCCTGAATTTGGGCAGTGGTACCAACACCATCACCATAACCACCAACAACGTGCCCACCACCACCACAATGAGTGCCCTGACTGCCTTGAAGGCCGGCGGAACCATCAGCGGCATATCCACGGCCACCAACACGGATCCCAAGGATTCCACCCTCATAGAGCTCCTGAAGCGAGGCACTCGCATCGCGGTGACCTCGAAGAAAACCCAGTCTCAGACCCAAACGGGGTCCAGTGTCCTAATGACCTCCAGCGCCTCAGCAACGAGTGCCATGGGTGCTGTTACGGAATTAACCACCATTGGTGGCAACAGCCTGCAGACAGTTGGACGCCAGATTATCACAAACAACAACCGCACGGTGATCATCCCCTCCGATGTCCAGGTGGTGTCCACCAAGAGCAAGCTTAGCACCTTGAGTAGTCTGGTCAAGAGTAGCAGCACCTCAACAGTTTCGAACAGCGTCTCCAACACTAGCTGCACATCGGGTAACATTTCCCTGGGCGATGGTACGCCGCTTTCACTGACCATAACTCCCAACCAGGAGATGTCGAGTGGCGGTACATCATCGGGAGGTGTCATCACGAGTGGCGGGGGTGGAGTTTACACAGTGACCTACACCAGTGACGGCACCGATCTGTTCGACGATGCCGAAGTCTACAATGTCACAGACACGGAGATGCTGCTGCAGACGGTGGACTCCATGGAGCTCCTGCAAGACGACGAGGATGACACACAGATAAAGAGCGAACATTCCGAGGACTTTGCCCTTCTGAGTGATGCTGGGGACAGTGTGCACACACAGCTGGTGAAGCTGGATACGGAGAATATATCCGGATCGGGTAACACTGGAAACAACAACACCGTCACGAACAACGCCAATACCACACCGCTGCCCACCTTCCAACAATTCCATTCCAAGGAACTGATCATGCAGAACAGTTCCCAGATTCAGGCAATAGCCAGCATGCGGAGCAGTGGCGGTGTCCTGGCCTCGCCACTTCACTCCCCGCTGGCCTATCCCACGCCGCCTTCGAGCCACGAGAACATGGCCCAGAGCTCCCCATTCATCGAGGATGCAGCTGCCCAGTTTGTGGATGCCACCAACACTTTCTTCGGCGACAAGACGGACTTCTCGCACATCTACTTCAAGACCGACGACGGTCAAGCTACCATCGAGCAGCTGGACGAGCAGGACAATGAGAAGATCCTCAAGCTCAAGTCGGTGCTGGAGGAGAGCAGCTTCGATCCCTCCATTAAGGTGGAGGACCTACTGAACGGCACGGACGACGACACCGAGTGTGATCTGCGGGAGTTTGCCGAGACAAATCTCTCGTTTCTGGACGAGGACCAAGAGTTCCTCAACGATTCCCGCAATGCCACTTCTCCGCTCTCAGAGTCGTTCTTCACCAGCGGTATTGGTTCCGCTGAGGATGTGAAACAGGTCCTGCGAGAGGTCCTGCCCGATGAAAATATGCAGTTGCAGATGAGTAGCGAGCAACAGGGCGAGAATATAATCGATCTCTACTATCTGCCCGGCTTGGGCCTGCAATCGCAGATGATGCCCAATTCGGAGGATCCATTGTTGTCCTCTTCGCCTAGGGAGTTTGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATCAGCAGGCCGATTTTATGTTGCCCCTGGTGGGAGGTCATGGCTTTACGTCGCTCCCAACCCAAAATCAATTCCTGGACAATAGCCAGGGGGGCGGCATGGGGCTGCAGCCCCTAAATAGCCTGCTCCAGCCCCTGCTCTTCAGCGGACCTAGTTCGAATAGCAATTTGGTTGCGGGCAACGATACCCACCTCCCCGCCGATTGCCAAATGAATACAAATCAGACAGCCCAGCTCGATGGAAGTTTGATGTTCGCCTGCGGCTCGGCTGTAGCGGTAACAACAGGCAACAAGCCCCTGCTCCCGTCCATGCCAACTCCAGTGGCCAATTTGCAACCGCTGTCGAACCAAACCAATTCCATTCTGAAGCGCCGACTGCGCTCGAACGCGCCCCAGGAAACGCACAAGTTCTCCAAGTTCCATACCCTTTCGCCGCACCGCTCAAAGCTGCGCAAGCCATCCCGCACCCACTACACTCCCGCTCCCATCCTGAATCCGGACCGCAAGGGCACAGGACTCTACTGCAACGTGCGGAAGCAGCTGGGCCAGGGTCTGTTCGACGCTTTCGATGATGACTTTGGGGACCCGGTGGGTCTGGTTGACTTCTCAGACGAGTCGAAGGTCAATCTCGGCTCGACCTACCAGGCACAGATTCCCAGCTGCCGGCCTCAGGAAGAGGCGTTGCGTGAGGATGTGGGCGCCGAAATGATGTGGAATCCTGAAGTGCAGGAAGACGAGAAGATCCTGATGCGCTACATAGATCTCAGCAAATCGTCGGCCGTGCCTATGGGCAGTCATTCCGAGGAGGTGGCCCTCCACACGCTGCTCAAGGCCCACGGGAACTCGGCGGCGGCGGTACTGAATCTGCTGCAGACCCAGTCCGGCGCCTTCCAGATGAAGTGGAGCTCCCACGAGCTGGAGCAGTTCCTGCGAGGTCTGGAGAAGCATGGCAAAGATTTTGGCAAGATTGCAAATACGCTCCTGACAAAGTCCTCCGGCGAGTGCGTGCAGATGTACTATTTCTGGAAGAAGCTGTGCGTGGACTACAAGGTATCTCACCTGAAGATGGAACCCGTCGTCGTGGTAACGCCCCCCGTCGAGAAACCCTATGTGTGCGAGATCCCCGACTGCTCAGCGAGCTTCAGTTCGAAAGCGGCACTGCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCTGTCCCGAATGCCAAGGACGGCGAATTCCCCTGCAAGGTGTGCGGCAAAGTCTTCAATAAGGTGAAGAGTCGTAGTGCTCACATGAAAACCCATCGGGTCCAGGAACCGGAGCAATCTGCAAAACACCAGCAGCAGCAGCAACAGCACCATCAAGTCAATGTCTCGACAGGATCTGGACTGGACAGTGTCGCCTCGACTTCGACGATCGCATCGACGACATAG
Protein Sequence
MAAINTVPKSIHLPLTSLSSAPRVLMCSASVGTEGSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPDPEMLADVLGTIQTASLKNNSITTATSSNSSSKSTSSNPVANGVSSSVGGSCHSGTVTGVSGIISIEAPRKNRPKLSSPTRHGPQQCQICCKIFGNASALAKHKLTHSDERKYICALCSKAFKRQDHLNGHMMTHRNKKPYECKADGCGKSYCDARSLRRHSENHHAGGATTPTTSQSLSPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLSPATASGDASSPDGATCIRTYISTGNSVVDAATGIALSDEQIKAMNLPIKTGVTLLSPTTSTSSNASSTASSSGSSSSSASVGTASSTASQSAVIATTSSPTITLSDGVSLEGEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVSSYKINTNSASTQSRPRTWNMQLLNNSQNVTVTVEDNTDMVAPSSSSPVEIKEEELNQQIVAAINPHLLNIVKLDKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDPETRRSEKKDSSGPPLQTASIGVRALIEEKIISKRKDITKGSFVVPAPPHSSGITTPLRRSISDLESFLNPKSSSSGQTQTLATSTGSTTAVLPAATTIKSSNGLSIQQIGLPQSIEIFSGGQKQSKTLNLGSGTNTITITTNNVPTTTTMSALTALKAGGTISGISTATNTDPKDSTLIELLKRGTRIAVTSKKTQSQTQTGSSVLMTSSASATSAMGAVTELTTIGGNSLQTVGRQIITNNNRTVIIPSDVQVVSTKSKLSTLSSLVKSSSTSTVSNSVSNTSCTSGNISLGDGTPLSLTITPNQEMSSGGTSSGGVITSGGGGVYTVTYTSDGTDLFDDAEVYNVTDTEMLLQTVDSMELLQDDEDDTQIKSEHSEDFALLSDAGDSVHTQLVKLDTENISGSGNTGNNNTVTNNANTTPLPTFQQFHSKELIMQNSSQIQAIASMRSSGGVLASPLHSPLAYPTPPSSHENMAQSSPFIEDAAAQFVDATNTFFGDKTDFSHIYFKTDDGQATIEQLDEQDNEKILKLKSVLEESSFDPSIKVEDLLNGTDDDTECDLREFAETNLSFLDEDQEFLNDSRNATSPLSESFFTSGIGSAEDVKQVLREVLPDENMQLQMSSEQQGENIIDLYYLPGLGLQSQMMPNSEDPLLSSSPREFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQQADFMLPLVGGHGFTSLPTQNQFLDNSQGGGMGLQPLNSLLQPLLFSGPSSNSNLVAGNDTHLPADCQMNTNQTAQLDGSLMFACGSAVAVTTGNKPLLPSMPTPVANLQPLSNQTNSILKRRLRSNAPQETHKFSKFHTLSPHRSKLRKPSRTHYTPAPILNPDRKGTGLYCNVRKQLGQGLFDAFDDDFGDPVGLVDFSDESKVNLGSTYQAQIPSCRPQEEALREDVGAEMMWNPEVQEDEKILMRYIDLSKSSAVPMGSHSEEVALHTLLKAHGNSAAAVLNLLQTQSGAFQMKWSSHELEQFLRGLEKHGKDFGKIANTLLTKSSGECVQMYYFWKKLCVDYKVSHLKMEPVVVVTPPVEKPYVCEIPDCSASFSSKAALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPNAKDGEFPCKVCGKVFNKVKSRSAHMKTHRVQEPEQSAKHQQQQQQHHQVNVSTGSGLDSVASTSTIASTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2