Dpro013319.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila prostipennis
Gene Symbol
RREB1
Assembly
GCA_037075205.1
Location
JBAMCJ010005534.1:676557-683138[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.036 2.8 8.8 0.8 1 21 234 254 234 256 0.93
2 13 0.00033 0.026 15.2 0.2 1 23 266 288 266 288 0.98
3 13 8e-05 0.0063 17.1 7.3 1 23 294 316 294 316 0.98
4 13 2.6 2.1e+02 2.9 1.5 2 19 534 551 534 552 0.96
5 13 0.0094 0.74 10.6 0.9 1 23 697 719 697 719 0.97
6 13 1.2e-05 0.00096 19.7 0.7 1 23 729 751 729 751 0.99
7 13 0.00082 0.065 14.0 2.0 1 23 757 780 757 780 0.97
8 13 0.0029 0.23 12.2 2.0 1 23 1064 1087 1064 1087 0.95
9 13 8.6e-05 0.0067 17.1 0.3 2 23 1423 1444 1422 1444 0.97
10 13 0.14 11 6.9 6.3 1 23 1450 1473 1450 1473 0.97
11 13 6.3 4.9e+02 1.8 1.7 1 23 1588 1611 1588 1611 0.82
12 13 0.0084 0.66 10.8 0.5 3 23 1668 1688 1666 1688 0.96
13 13 0.0014 0.11 13.3 4.8 1 23 1694 1716 1694 1716 0.99

Sequence Information

Coding Sequence
ATGCTCGCcgcacagcaacagcagcagcagcagcacagcaACAGCacagcggaaacggaaatggagCGCCAGCGCAGGGACTCCACCACATCGGAGTCATCCCTGGAGCACCTGGACCTGGGTCGCACGCCCAAGAAGCTGGGCGGTGGCTCCGCGCAGACCACATCCACGCCCCACGAATTGACGGCGGTGACGTCGCGCAAGCGCAAACTTCGCCAGCTGCAATTGaatcaccagcagcagcagcatcagcaggaTTTGCtgagcgaggaggaggacgaggagcgcGACGAGCTGGAGGATGAGGAGCCCAGGAACCTGGGGCGGCACAAGCAGCGCCGCAGCACCCAGGCCTCCATTGTGGTGGACTACAGCGGTGGCGACGCCAGTTCGCTGCGCAAGAAGTTCCGACTCAACCGCTCGGCGGCCAGTCTCTCGGAATCGGGATTCGTGGACGCCAGCAGCACGGCCCACAGTGGCTATCtgggcaacagcagcagtggCAGTGCCACCAACAACAACCTAACCACAGCCACCAGTGGCGGAGGTGCCGGAGTGCCTCCATCTTCGACTGGCGGCGGCGGggcctccagcagcagcagcagcagcagcggcggatCCGGCGGCTCCTCTCCGCAGGGAGGACTGTGCCTCTCCAGCGGCGAGTCGGGCATCGGAGCCGGGGACGAGCACATGAAGTACCTGTGCCCCATCTGCGAGGTGGTCTCGGCCACGCCGCACGAGTTCACCAACCACATCCGGTGCCACAACTACGCCAACGGCGACACGGAGAACTTCACCTGCCGCATTTGCTCCAAGGTGCTATCCTCGGCCTCATCCCTGGACAGACACGTGCTGGTCCACACGGGCGAGCGGCCCTTCAACTGCCGCTACTGCCACCTGACCTTCACCACCAACGGCAACATGCACCGCCACATGCGCACCCACAAGCAGCATCAGGCGGCGCAGTCGCAACAGCAGCACCCTCAgtcgcaacagcagcagtcgcaacagcaacagcgcaggcagcagcagcagcagctgaatcccgcccagcagcagcagcagccactgGTGGCCACCGCGTTGTCCGCGGGACGGGCGGAGAGCTACGAGAGCGACGCCAGCTGCTCCACGGACGTCTCCAGTGGCCACAGTCACAGTCACAGTCACAGTCAcagtcgcagcagcagctccttgaaccacaacaacaacaacaacaacaactcgcACAAGGCTAACAACAATCTGAAGGAGCTGGAGGATGAGGTGGATCAGCTGGAGAGCAAGCAGCGCCGCCCGAAGACGAccatcaacaacaacatcatcgCTCGGGAGGATCAGGAGGATctggaggatgaggaggaggagcgggaggaggaggaggagacgGATGTGGCCATGCTGACCAGCACACCGGATGTGGCCACCCTGCTGGCCGGAGCCAGTGCCTCCGGAGCGGCCTCCCGTTCGCCCTCGCCCTCGCCGGCGGCCTCGCCCGCCCTGCTCCTCAGCTGCCCCGCCTGCGGAGCCTCCGACTTCGAGACGCTGCCCGCTCTGTGCGCCCACCTGGATGCCCGGCACTCGGACATCCCGGCCAAGTGCCGCGACTGCGAGGTGATCTTCGCCAGCCACCGCCAGCTGCAGGGCCACTGCTGCCGGGGCTCCTCCGGCCTGCCGCCGCTCCTGGGGGCCAGCAGCTCGCCGCTGCATCAGCGGGACGAGGATCGgaacgacgacgaggaggagctggaggaggaggagcaggtggaCCGCAAGGAGCGGATGCCCGGCCAGAGCGAGGACTTCTTCCACCAGCTGTACCTGAAGCAGAAGTCCACGGCCGCCGGACTGGCCATCTCGCACCCGCCCTCGCCCATCAAGCACGAGCCGGCGGACAGCAAGGACCTGGCCGACATCCAGAGCATCCTGAACATGaccagctccagctccagcttcCTGCGCAACTTCGAGCAGTCGGTGAACACGCCCAGCTCCAGCCAGTACAGCCTGGACGGGCGGgaccaggaggaggaggcccaGGACGCCTTCACCTCGGAGTTCCGCCGCATGAAGCTGCGCGGCGAGTTCCCCTGCAAGCTCTGCAGCTGCGTCTTCCCCAATCTGCGCGCCCTCAAGGGCCACAACCGGGTGCACCTGGGCGCCGTGGGGCCCGCCGGTCCCTTCCGCTGCAACATGTGTCCCTACGCCGTCTGCGACAAGGCCGCCCTGGTGCGGCACATGCGCACCCACAACGGGGATCGCCCCTACGAGTGCGCCGTCTGCAACTACGCCTTCACCACCAAGGCCAACTGCGAGCGCCACCTGAGGAACCGCCACGGGAAGACCTCGCGGGAGGAGGTGAAGCGGGCCATTGTCTACCATCCGGCGGAGGACGCCGGCTGCGAGGACAGCAAGTCCCGCCTGGGCGAGGACCTGGCCGATCTGAGTTTCCGCTCCGTCAGCCCCACGCCACCGCCTCCTTCGGTGGCTCCTCTGCCGCTGGGCGAGatcggcggcagcagcagcagcagcagctcccaGCTGAAGCACATGCTGCTGGGCGAGAATCACCAGCATCCGGTGGCCCAGCCGCCGCTCAAGATCCAGGTGAAGAGCCTGGACCAGCTGGTGGACAAGAAGCCGGAGAAGGCGGAGAAGCCTCCGCTGGACTTTAGCATGGATGTGCTGGATCTCAGCAAGAAGCCAACAAGTGGAGTTCCCTCTTCGGTTACTCCCAATCCCACTCCTAATCCCACGCCCAGTGCCCTGCCACCCGTGCTGCCcggtggaagtggaagtggaaccCCCGTCGACCTGGCCGCCGCcttggagcagcagcagttgctgctcgcccagcagcagctctTCGGCGCTGGCGGAGATGCCGCCTCCCAGTACATGCAGCAGCTGTTCCGCAGCCTGATGTTCCAGTCGCAGACCTCGGGCTTCCCCTTCTTCCCCTTCATGGCGCCcccgccgccgcagcagcagcagcagcaggcgcagcTGAATCCCGAGAAGGCGCCGCTGGTGAGTCCGCCCAGTCGGATGGGCTCCCTCAATCCCATGCCagtgggcgtgggcgtgggcgtgcCCGTGCCGCCCGGCGGCCCCGTCAAGATGGTCATCAAGAACGGAGTGCTGATGCCCAAGCAGAAGCAGCGACGCTACCGCACCGAGCGCCCCTTCGCCTGCGAGCACTGCTCGGCGAGATTCACCCTGCGCTCGAACATGGAGCGGCACGTGAAGCAGCAGCACCCGCAGTTCTACGCCCAGCGCCAGCGGAGCGGCCACCACGTGATGAGGGGCAGGGGAGCCTCCAATgcggccgccgctgccgctgccgccgccgctgccgccgccgccatgGGTCCAGGATCCTCCTCCGCCGGCTCCAACCACCACCATCATGGACACGCTCCCATCTCGGAGCAGGTCAAGTACGCCATTCTCGCCCAGCAGCTGAAGGCCCACAAGAACACCGACCTGCTGCAGCAGGCTTTGGCCCACGGCTCCAGCAGCGTGGCAGGCAATCCCCTCCTGCACTTCGGCTACCCCCTGGCCACGCCCAGTCCCCTGCACAACGGCCACCCCCTCCCGATGGACGACGACGAGCCCAAGCTGATCatcgacgaggacgaggatcaCGAGGTGGAGGCGGAGCCGGAGGAAGTGGATGACTTCGAGGAGGAccaggacgaggaggaggaggaggagctggaggagctggaggagccgGAGTTGATGATCCCGGTGGATGAACAGCCAGCCGAGGAAGATcccgaggaggagcaggaactGCCCGCCAACGAGGCCGCCCAGAAGATGGCCGAGACCATCCTGGAGCAGGCCATCAAGGCGGGCAATCCTGCGCCCAGTGGCCAGGAGAAGGACACCCCCAAGACGGCGACCATGCAGGAGCCAACCAGCAGTGCCAGCAGCCTGAAGACCATGATCGCCCAGGCCGAGTCCGTGGGCAAGTCGCTCAAGGAGGTGGCCAGCTCGCCGTTCAAGGACGAGTCGCAGGACCTGGTGCCGGTGGCCAAGCTGGTGGACAACGCCACCAGCCAGACGATGAGCTTCAACAGCTACTTCCGGCCCAGCGACGTGGCCAACCACATGGAGCAGAGCGACGAGGAGGGCCTGGTGGCCTCCGGGAGCGCCAGCGAgagcaacaacagcggcaCCGAGGACGTCACCTCCAGCAGCTCGGGCAGCGAGCCCAAGAAGAAGTCCGCCTACAGCCTGGCCCCCAACCGGGTCTCCTGTCCCTACTGCCAGCGCATGTTCCCCTGGAGCAGCTCCCTGCGCCGCCACATCCTCACCCACACCGGGCAGAAGCCCTTCAAGTGCTCCCACTGCCCGCTGCTCTTCACCACCAAGAGCAACTGCGACCGCCACCTGCTGCGCAAGCACGGCAACGTCGAGTCCGCCATGTCGGTCTACGTGCCCACCGAGGACGTCAGCGAGCCCATCCCGGTGCCCAAGTCGGTGGAGGAGATcgagctggaggagcagcGTCGCCGCCAGGAGGCGGAGCGCGAGAAGGAGCGCGAGCTGGAGCGGGAGAGGGAGTTGGAGCGGGAAAGGGAGCGGGAAAGGGAgctggagaaggagaaggagaaggagcggGAGCGCCAGCAGCTCATCCAGAAGCTGGCGGCCCAGATGaacgccgctgccgccgccgccgccggaggaggaggagcttctgcagcagcagcagcagcggatgCTTTGGCTGGCGGAGATCTGCCCTACAAGTGCCACCTCTGCGAGGGCTCCTTCGCCGAGCGCCTGCAGTGCCTGGAGCACATCAAGCTGGCCCATGCCCACGAGTTCGCcctgctgctggccaaggGAGCCATCGAGAACGAGTCGCTGGAGGCGGCCAATCCCcaccagcagccgcagcagcagccgcactCCGATGACGAGGCAGccaacggaaacggaagtcgCGGCAAGTATCCCGACTACAGCAACCGCAAGGTGATCTGCGCCTTCTGCGTGCGCCGCTTCTGGTCCACCGAGGATCTGCGGCGCCACATGCGCACCCACTCCGGCGAGCGGCCCTTCCAGTGCGACATCTGCCTGCGCAAGTTCACCTTGAAGCACAGCATGCTGCGGCACATGAAGAAGCACAGCGGACGGGCCCACAATGGGGACACCCCGGGATCCGATTGCTCCGACGACGAGCAGCCCATGAGCAGCCCACCGGGCACACcggctcctcctgctgctcctgctgctcctccttcgGCTGCCCAGCCGccggccaacaacaacaacagctgccatgtgaacaacaacaatggcggcGGGAACAAGGGACTGGGCCTGAAGCTGCCCAAGCTCCACGAGCTCCTGGACAAGGCCAGCGAGTGGCGGGTGGCCAGTCGCCTGGGCGAGCACAAGGAGAACCTGGGCGAGGCGACACCCTCGCCGGCGGCCGTGGCTGGATCGGATCTGATCGGCAACCTGCTGGGCATCAGCGACCAGGGCATCCTCAACAAGCTGCTCTCCTCCGCCGACGAGGCGGCCAAGCTCCTGGGGGTGGACAACAAGTGA
Protein Sequence
MLAAQQQQQQQHSNSTAETEMERQRRDSTTSESSLEHLDLGRTPKKLGGGSAQTTSTPHELTAVTSRKRKLRQLQLNHQQQQHQQDLLSEEEDEERDELEDEEPRNLGRHKQRRSTQASIVVDYSGGDASSLRKKFRLNRSAASLSESGFVDASSTAHSGYLGNSSSGSATNNNLTTATSGGGAGVPPSSTGGGGASSSSSSSSGGSGGSSPQGGLCLSSGESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQAAQSQQQHPQSQQQQSQQQQRRQQQQQLNPAQQQQQPLVATALSAGRAESYESDASCSTDVSSGHSHSHSHSHSRSSSSLNHNNNNNNNSHKANNNLKELEDEVDQLESKQRRPKTTINNNIIAREDQEDLEDEEEEREEEEETDVAMLTSTPDVATLLAGASASGAASRSPSPSPAASPALLLSCPACGASDFETLPALCAHLDARHSDIPAKCRDCEVIFASHRQLQGHCCRGSSGLPPLLGASSSPLHQRDEDRNDDEEELEEEEQVDRKERMPGQSEDFFHQLYLKQKSTAAGLAISHPPSPIKHEPADSKDLADIQSILNMTSSSSSFLRNFEQSVNTPSSSQYSLDGRDQEEEAQDAFTSEFRRMKLRGEFPCKLCSCVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIVYHPAEDAGCEDSKSRLGEDLADLSFRSVSPTPPPPSVAPLPLGEIGGSSSSSSSQLKHMLLGENHQHPVAQPPLKIQVKSLDQLVDKKPEKAEKPPLDFSMDVLDLSKKPTSGVPSSVTPNPTPNPTPSALPPVLPGGSGSGTPVDLAAALEQQQLLLAQQQLFGAGGDAASQYMQQLFRSLMFQSQTSGFPFFPFMAPPPPQQQQQQAQLNPEKAPLVSPPSRMGSLNPMPVGVGVGVPVPPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASNAAAAAAAAAAAAAAMGPGSSSAGSNHHHHGHAPISEQVKYAILAQQLKAHKNTDLLQQALAHGSSSVAGNPLLHFGYPLATPSPLHNGHPLPMDDDEPKLIIDEDEDHEVEAEPEEVDDFEEDQDEEEEEELEELEEPELMIPVDEQPAEEDPEEEQELPANEAAQKMAETILEQAIKAGNPAPSGQEKDTPKTATMQEPTSSASSLKTMIAQAESVGKSLKEVASSPFKDESQDLVPVAKLVDNATSQTMSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSGSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQEAEREKERELERERELERERERERELEKEKEKERERQQLIQKLAAQMNAAAAAAAGGGGASAAAAAADALAGGDLPYKCHLCEGSFAERLQCLEHIKLAHAHEFALLLAKGAIENESLEAANPHQQPQQQPHSDDEAANGNGSRGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGRAHNGDTPGSDCSDDEQPMSSPPGTPAPPAAPAAPPSAAQPPANNNNSCHVNNNNGGGNKGLGLKLPKLHELLDKASEWRVASRLGEHKENLGEATPSPAAVAGSDLIGNLLGISDQGILNKLLSSADEAAKLLGVDNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00605068;
90% Identity
-
80% Identity
-