Basic Information

Gene Symbol
ct
Assembly
GCA_037075205.1
Location
JBAMCJ010006093.1:179645-217301[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.6e-27 7e-23 80.7 0.0 3 72 1004 1074 1002 1079 0.95
2 3 6.5e-32 6.9e-28 96.7 0.0 3 77 1479 1554 1477 1556 0.96
3 3 4e-31 4.2e-27 94.2 0.0 3 76 1757 1831 1755 1834 0.96

Sequence Information

Coding Sequence
ATGGCACGCGCTACCCTGGCCGAGAAGGAAGTGAACACACTCAAAGAGCAGCTATCCACAGGCAATCCCGAGAACAGCGATAACAGCGACACAGCaacagttgcagcagcaacaaacgACAGTGAGGAGgatcaacagcaacaacaacagcagagcGACAGCGACAAGCTGCTGAACAGCTCCATTGTTGCAGCGGCCATAAcgctgcagcagcagaacGGCAGCAATCTGCTGGCGAACACAAATACGCCGTCGCCCTCGCCGCCGTTGCTCAGcgccgagcagcagcagcagttgcagagCAGTTTGCAACAGAGCGGCGGTGGCGCCTGCCTCAATCCGAAGCTCTTCTTCAATCACGCCCagcagatgatgatgatggaggCGGCAGctgcggcagcagcggcggcattgcaacagcagcagcaacagcaatcgCCGTTGCATTCGCCGGCGACTGAGGTAGCAATTCCCGCAGAACAGCCAGCAGgagcggcaacagcagcagcaacaccgaTTGCCAGTGGCAACATcaagagcagcggcagcagcagcaacatcaatcacagcaacaccagcaacaataGTCACCAGGACCAGGAGGACCAGGAGCTGgacgacgaggatgaggaggaggacgaggatgaggacgaggacgatgaGGAGGAGAATGCCTCGATGCAATCGAATGCCGATGATATGGAGCTGGATGCACAGCAAGAAACCAGAACTGAGCCAAGTGCAACAACACAACAGCAGGATCTTGCGGATCTGGAGGAGAACAAAGATGCGGGGGAGGCTAGTTTAAATGTTAGCAATAATCATACAACCGATAGCAATAATAGTTGTAGTCGAAAGAACAACAATGGTGGTGGCAATGAGAGTGAGCAACATGTTGCCAATTCGGCGGAGGACGATGATTGCGCCAACAACAATACAAACaccagcaataacaacaataccAGCAgcaccgccaccgccaccagcaacaccaacaacaacaacaacaacaacagcagcagcggcaacagcgAGAAGCGCAAGAAGaagaacaataacaacaacaatggccagCCTGCTGTTTTATTAGCTGCCAAAGATAAAGAGATTAAAGCACTTCTGGATGAACTGCAACGCCTGAGGGCGCTGGAGCAGACGCATCTGGTGCAAATCCAGCGACTGGAGGAGCATTTGGAGGTCAAGCGCCAGCACATAATGCGATTGGAGGCGCGTCTCGATAAGCAGCAGATCAATGAGGCGCTCGCAGAGGCGACCGCTTTGGCGGCAGCGGCtgccaccaacaacaacaacaatagccaGAGCAGCGACAACAATAAGAATAGCAACAATGCTGGGGAAGCAACACCGCTGGATGCGTCATCATCGGTCATCAGCATTGGCGATCTGCCGGAGGCCACAAAGACTTCAGCCGCAGTTCCtcctgccgccgccgccgctgagGATGAGGAAGAGGACGAGGATCAGGCCATGCTGGTGGACtccgaggaggcggaggagaagCCAGTGGAGCACCAGCAGggggacgacgacgacgaggaggaggaggaggaggaggccgagGATCGGGAGGCGGTCAATGccaacaccaccaccaccaccaccgatagcaacgagctcaaaatcaaaaaggaaCAGCATCCGCTGGATCTGAATGTGCTCAGTCCGAATTCAGCATTGGCAACTGCAGCTgcggccgccgctgccgccgcctgcGCCAACGACCCCAACAAATTCCAGGCGCTGCTCATCGAGCGGACCAAAGCCCTGGCCGCCGAGGCGCTCAAGAATGGCGCCAGTGATGCCATCAGCGAAGAAATCAACcgaaatgaagaagaagaagaagaagattcgCCAGCAGCAAATGCAACTCTGGCCACACTGGCAACATCAAGTGAAACCGCAAACGAAACGGAAAcaaaaacgaataaaaatgACATGGCGCCCAAGCAGGAAATCGAAGAagtggatgaggatgaggatccTTCGGTCAATCTGCCGGAGCAACTGGTCAACGATTATTGGCGACGAGGCTTTGAATCGTCTGCGAATAATGTGAATacaaatacgaatacgaattcGAGTGCAAATGCAATGCCAGGGAGCAAAACGCcaataaattatcaaaatcTTAGGGCCGAGCAGCAGGCACAattgctgccgccgccgccaccaccaccaccgttGCCACCCCAGCAACATCTACACTTttcacagcaacagcaacaacaacaacagcaacaacagcagcaacatggaCCATCGTCCACAGCCCTGCTTAGTCAACTGGTTAACTCAACATTTTCCAACTCTTCCAACTCTTCTCGCCTAGAtgcccaccaccaccaccagcagcagcagcagcagcaacaccaccagcagcagcaacaccaccagcagcagcaacaccaccagcaacagcagcaacaccaccatcagcaacatcatcatcacctGCAAAATAGCGGCAGCAATAGCAATCCAGCGAGCAACAGCGACAGTTTGAGCTTGAATCATCATGGCCATCATTTGCATCACTTGCATCATTTGCATCACGAATCCAGTTCGAATTCGAGCACACCGACAGCGTCCGGGAACGGTGGTAGCAACAATGCTAGCAACCAGGCCAACCAAGCCACCGCTCAGCTGGCCGCCAGTTTGGCCAGCACTTTGAATGGAGCGCAGAAATcgctgctgcagcaggagGATAGCAATGGActggccaccgccgccgcaaTGGCGGCTCATGCCCATTTGGGTCCAGCCGGCTTTCTGCCCGGCCTCCCGGCCTTTCAATTTGCCGCCGCCCAAGTGGCCGCCGGTGGTGGCGACGGACGTGTGGGTCACTATCGTTTCGCCGACTCCGAGTTGCAACTGCCGCCGGGCGCCTCGATGGCCGGCCGTTTGGGCGAGTCGCTGATACCCAAGGGCGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAATCAGGCCCTGGATACCCTGCACATTTCGCGACGCGTTCGGGAACTCCTGTCGGTGCACAACATTGGCCAGCGGCTGTTTGCCAAATACATTTTGGGCCTGTCCCAAGGCACCGTTTCGGAGCTGTTGAGCAAACCCAAGCCCTGGGACAAGCTGACGGAGAAGGGACGGGATAGCTACCGCAAAATGCACGCCTGGGCCTGTGACGATAATGCCGTCATGCTGCTCAAATCGCTGATACCCAAGAAAGATTCTGGCCTGCCGCAGTATGCGGGTCGCGGAGCCGGCGGCGCTGGCGGCGATGATTCCATGTCCGAGGACCGGATTGCCCACATCCTCAGCGAGGCCTCGTCGCTGATGAAGCAGACGAGCGTGGCCCATCGGGAGCACCGGGAGCTCCAGCAGGAGCGCCGCAGTCACGGCGGCGGCGAGGATTCGCACAGCAACGAGGACAGCAAGTCGCCGCCGCAGAGCTGCACCTCGCCCTTCTTCAAGGTCGAGCAGCAgctgaagcagcagcagcaccagcagcagcagcacctcaCTCCCGAGCAGGCGGCGGCCGCCCAGCAgcgggagagggagagggagcagagggagcgggagcgggagcagcagcagcgactgAGGCACGAGGATTTGGCCCAGGACAAGATGGCCCGGCTCTACCAGGAGCTAATTGCACGCACTCCACGGGAGACGGCCTTTCCAAGCTTCCTCTTCTCACCCTCGCTCTTCGGAGGAGCCGCCGGCATGCCGGGAGCGGCTGGCAACGCCTTCCCCGCCATGGCCGATGAGAATATGCGCCACGTCTTCGAGCGCGAGATCGCCAagctgcagcagcaccagcagcagcagcagcagcaggtccAGCAGCAGTTCCCCAACTTCTCCAGCCTGATGGCcctgcagcagcaggtgcTCAACGGGGCCCAGGATCTCTCGCTGGCCGCCGTGGCCGCCTCCAAGGACATCAAGCTGAATGGCCAGCGATCCTCGCTGGAGCACAGcgccggcagcagcagcagttgctcCAAGGACGGCGAACGGGATGAAGCCTACCCGAGTTCGCTGCATGGCCGCAAATCCGAGGGCGGCGGCACACCAGCACCACCGGCCCCGCCGGCGGGAGCAGTGGGACCACCGACGAGCGGAGGAGCACCAGGAGCACCCGGAGGAGCCATGGGAGCAAGTGGCGGAGCCAGCGGCAATTCGGCGGCGCCCAGTCCGCTGAGCAATTCCATCCTCCCGCCAGCATTGAGCAGCCAAAACGAGGAGTTCGCGGCCACCGCCAGTCCGCTGCAGCGCATGGCCAGCATCACCAACTCGCTGATCACCCAGCCGCCGGTGACGCCGCACCACAGTACTCCACAGCGACCCACCAAGGCGGTGCTGCCGCCCATCACCCAGCAGCAGTTCGATATGTTCAACAACCTCAACACCGAGGACATTGTGAGGCGGGTGAAGGAGGCGCTCTCCCAGTACTCGATCTCGCAGCGTCTGTTTGGCGAATCGGTGCTCGGCTTGTCGCAGGGTTCCGTCTCCGATCTGCTGGCCAGGCCCAAGCCCTGGCACATGCTGACCCAGAAGGGCCGGGAGCCCTTCATACGCATGAAGATGTTCCTGGAGGACGAGAATGCCGTGCACAAGCTGGTGGCCAGCCAGTACAAGATCGCCCCCGAGAAGCTGATGCGCACGGGCAGCTACAGCGGCAGTCCGCAGATGCCGCAGGGCCTGGCCAGCAAGATGCAGGCCGCCTCGCTGCCCATGCAGAAGATGATGAGCGAGCTGAAGCTGCAGGAGCCGGCCCAGGCGCAGCACCTGATGCAGCAGATGCAGGCGGCGGCCATGTCGGCGgccatgcagcagcagcagcagcaggtggcccaggcgcagcagcagcacctcgcccagcagcagcagcagcaccagcatctggctgcccagcagcagcagcagcagcagcatcagcagcagcagcaacatctggccgcccagcagcagcagcatccccATCATGCGGCCGCCGCGGCTGCTGCACTGCATCACCAGAGCATGCTGCTCACCTCGCCCGGCCTGCCGCCCCAGCATGCCATCAGCCTGCCGCCGTCGGCCGCCAGTGCCAAtgccaatcccaatcccctggccaatcccaatcccagcgAGAAGAAGCCCATGCTGATGCCCGTGCACGGCACGAATGCGATGAGGAGTCTGCACCAGCACATGTCGCCCACCGTCTATGAGATGGCCGCTTTGACCCAGGATCTGGACACGCACGACATAACCACCAAGATCAAGGAGGCCCTGTTGGCCAACAACATCGGCCAGAAGATATTCGGCGAGGCTGTGCTGGGACTCTCGCAGGGATCGGTCTCCGAGCTGCTGAGCAAACCCAAGCCCTGGCATATGCTTTCGATCAAGGGACGGGAGCCCTTCATCCGCATGCAGCTGTGGCTCAGCGATGCCAACAATGTGGAGCGCCTGCAGCTGCTGAAGAACGAGCGGCGGGAGGCGAGCAAGCGGCGGAGGAGCACGGGTCCCAATCAGCAGGACAACAGCAGCGATACCTCGAGCAACGACACCAATGACTTCTACACCAGCAGTCCGGGACCGGGTTCGGTGGGTTCCGGCGTGGGTGGAGCACCGCCCAGCAAAAAGCAGCGCGTCCTCTTCTCCGAGGAGCAAAAGGAGGCTCTTAGGCTGGCCTTTGCCCTGGATCCGTATCCCAATGTGGGCACCATTGAGTTTCTGGCCAATGAGCTGGGTTTAGCCACCCGTACGATTACCAATTGGTTCCACAATCATCGCATGCGCCTGAAGCAACAGGTGCCCCATGGTCCCGCCGGCCAGGATAATCCGATACCGAGTCGCGAGAGCACCAGTGCCACGCCCTTCGATCCCGTCCAGTTTCGCATCCTGCTGCAGCAGCGTCTGCTGGAGCTGCACAAGGAGCGGATGGGCATGAGCGGTGCCCCCATCCCGTATCCCCCGTActttgctgccgctgccattTTGGGACGCAGTCTGGCGGGGATTCCCGgcgcagcagcggcggccggagcagctgcagcagctgccgcCGTGGGAGCCGCCGGCGGTGATGAGCTGCAGGCCCTGAATCAGGCCTTCAAGGAGCAGATGAGCGGTTTGGACCTATCGATGCCCACGCTGAAGCGCGAGCGCAGCGATGACTACCAGGACGAGCTGGAACTGGAGTCGGGCGGTCACAATCTGAGCGACAACGAGTCGCTGGAGGGCCAGGAGGCGCTGGAGGACAAGACGACGGCCAGCGATTACGAGAAGGCGCTGCATAAGTCCGCCTTggcggccgccgccgcctaCATGTCGAATGCGGTGCGGAGTTCGCGCCGCAAGCCGGCCGCCCCCCAGTGGGTCAATCCCGCCGGTGCGGTGACCAATCCCAGTGCCGTGGTGGCCGCCgttgcggcggcggcagcggcagccgcGGCAGCGGACAGCGAGCGCATCATCAACGGCGTGTGCGTGATGCAGGGAGCCGCCGAGCCAACGGATGGCGGCGGTGGCAACGACGAGGAGGCCGAGGAGCATGAGCATGCCCAGCTGGAGATCGATCAGCGCTTCATGGAGCCGGAGGTGCACATCaagcaggaggaggacgacgacgaggagccGCCGGCGACGGGCGACAACGGCGAGGAGAACGGCGATCTGAAGCTGAAGGTGGTCAACGAGGAGAAGCTGCGCATGGTGCGGGTTCGACGGCTGAGCAGCACTGGTGGCGGCAGTGGATCCTCCGAGGAGATGCCCCCGCcatcggcagcagcagcagtcgccGCTTCAgccccctcctcctccgcctcctcctcctcggccagCGGAGCAGTGGAGggcagcagttgcagcagttccagcagcagcagcagctccacgcCGGCAGTGACCaccggagcagcagcagcgggtTGGAATTACTAG
Protein Sequence
MARATLAEKEVNTLKEQLSTGNPENSDNSDTATVAAATNDSEEDQQQQQQQSDSDKLLNSSIVAAAITLQQQNGSNLLANTNTPSPSPPLLSAEQQQQLQSSLQQSGGGACLNPKLFFNHAQQMMMMEAAAAAAAAALQQQQQQQSPLHSPATEVAIPAEQPAGAATAAATPIASGNIKSSGSSSNINHSNTSNNSHQDQEDQELDDEDEEEDEDEDEDDEEENASMQSNADDMELDAQQETRTEPSATTQQQDLADLEENKDAGEASLNVSNNHTTDSNNSCSRKNNNGGGNESEQHVANSAEDDDCANNNTNTSNNNNTSSTATATSNTNNNNNNNSSSGNSEKRKKKNNNNNNGQPAVLLAAKDKEIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAAATNNNNNSQSSDNNKNSNNAGEATPLDASSSVISIGDLPEATKTSAAVPPAAAAAEDEEEDEDQAMLVDSEEAEEKPVEHQQGDDDDEEEEEEEAEDREAVNANTTTTTTDSNELKIKKEQHPLDLNVLSPNSALATAAAAAAAAACANDPNKFQALLIERTKALAAEALKNGASDAISEEINRNEEEEEEDSPAANATLATLATSSETANETETKTNKNDMAPKQEIEEVDEDEDPSVNLPEQLVNDYWRRGFESSANNVNTNTNTNSSANAMPGSKTPINYQNLRAEQQAQLLPPPPPPPPLPPQQHLHFSQQQQQQQQQQQQQHGPSSTALLSQLVNSTFSNSSNSSRLDAHHHHQQQQQQQHHQQQQHHQQQQHHQQQQQHHHQQHHHHLQNSGSNSNPASNSDSLSLNHHGHHLHHLHHLHHESSSNSSTPTASGNGGSNNASNQANQATAQLAASLASTLNGAQKSLLQQEDSNGLATAAAMAAHAHLGPAGFLPGLPAFQFAAAQVAAGGGDGRVGHYRFADSELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGAGGDDSMSEDRIAHILSEASSLMKQTSVAHREHRELQQERRSHGGGEDSHSNEDSKSPPQSCTSPFFKVEQQLKQQQHQQQQHLTPEQAAAAQQREREREQREREREQQQRLRHEDLAQDKMARLYQELIARTPRETAFPSFLFSPSLFGGAAGMPGAAGNAFPAMADENMRHVFEREIAKLQQHQQQQQQQVQQQFPNFSSLMALQQQVLNGAQDLSLAAVAASKDIKLNGQRSSLEHSAGSSSSCSKDGERDEAYPSSLHGRKSEGGGTPAPPAPPAGAVGPPTSGGAPGAPGGAMGASGGASGNSAAPSPLSNSILPPALSSQNEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLASKMQAASLPMQKMMSELKLQEPAQAQHLMQQMQAAAMSAAMQQQQQQVAQAQQQHLAQQQQQHQHLAAQQQQQQQHQQQQQHLAAQQQQHPHHAAAAAAALHHQSMLLTSPGLPPQHAISLPPSAASANANPNPLANPNPSEKKPMLMPVHGTNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPAGQDNPIPSRESTSATPFDPVQFRILLQQRLLELHKERMGMSGAPIPYPPYFAAAAILGRSLAGIPGAAAAAGAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELESGGHNLSDNESLEGQEALEDKTTASDYEKALHKSALAAAAAYMSNAVRSSRRKPAAPQWVNPAGAVTNPSAVVAAVAAAAAAAAAADSERIINGVCVMQGAAEPTDGGGGNDEEAEEHEHAQLEIDQRFMEPEVHIKQEEDDDEEPPATGDNGEENGDLKLKVVNEEKLRMVRVRRLSSTGGGSGSSEEMPPPSAAAAVAASAPSSSASSSSASGAVEGSSCSSSSSSSSSTPAVTTGAAAAGWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2