Basic Information

Insect: Drosophila prosaltans
Gene Symbol: -
Assembly: GCA_018151275.1
Location: JAECWY010001818.1:3634129-3636052[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1e-05 0.00089 19.8 1.8 1 23 107 129 107 129 0.96

2 11 1.1e-06 9.3e-05 22.9 2.5 1 23 135 158 135 158 0.97

3 11 3.8e-05 0.0033 18.0 0.3 1 23 164 186 164 186 0.97

4 11 1.4e-05 0.0013 19.3 0.4 1 23 192 214 192 215 0.95

5 11 1.4e-06 0.00013 22.5 0.9 1 23 222 244 222 244 0.97

6 11 0.0043 0.38 11.5 1.0 1 23 250 273 250 274 0.95

7 11 0.0023 0.2 12.3 0.3 1 23 279 301 279 301 0.97

8 11 1.9e-05 0.0017 18.9 2.7 1 23 307 329 307 329 0.98

9 11 1.8e-05 0.0015 19.0 4.7 1 23 335 357 335 357 0.99

10 11 0.0055 0.48 11.2 1.1 1 23 363 388 363 388 0.92

11 11 0.0013 0.12 13.1 0.5 1 19 394 412 394 414 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1e-05	0.00089	19.8	1.8	1	23	107	129	107	129	0.96
2	11	1.1e-06	9.3e-05	22.9	2.5	1	23	135	158	135	158	0.97
3	11	3.8e-05	0.0033	18.0	0.3	1	23	164	186	164	186	0.97
4	11	1.4e-05	0.0013	19.3	0.4	1	23	192	214	192	215	0.95
5	11	1.4e-06	0.00013	22.5	0.9	1	23	222	244	222	244	0.97
6	11	0.0043	0.38	11.5	1.0	1	23	250	273	250	274	0.95
7	11	0.0023	0.2	12.3	0.3	1	23	279	301	279	301	0.97
8	11	1.9e-05	0.0017	18.9	2.7	1	23	307	329	307	329	0.98
9	11	1.8e-05	0.0015	19.0	4.7	1	23	335	357	335	357	0.99
10	11	0.0055	0.48	11.2	1.1	1	23	363	388	363	388	0.92
11	11	0.0013	0.12	13.1	0.5	1	19	394	412	394	414	0.95

Sequence Information

Coding Sequence: ATGGCACGCAGCCGTCGCAGTTTATCCAAAGAGGATGCCGTCTCCCTGCTTACCGATAGTGGTATTTCATTGTCCTCGCCGCCGGCGGCCAGAGACTCCTCGTCGCCGACAACAACTACAACAACAACATCGATCAAGCGGCGTAAGAGCAGTCTAAGAGATAACAATTATGCCGAGGCCGAGGATGGTGAAGATGGTGACACGGAACAGGACTCTCGCGATGCAGACTATGTACAACCCTTGCCCAAGAAATCATCAAGAAAATCATCAATAGCATCATCATCGGCATCACCATCAGAATCTTGTCGTCGCAAACAACATATTTGTCCGCATTGCTCTAAGGAATTTGGTGGTAAAACTGATCTTCAGCGTCATATGCTAATCCATTCGGATGAGCGGCCGCACAAGTGTGCCGAATGTGGTAAATGTTATCGTCAGGCAGTTAATCTTAAAAATCATATAACCACCGCTCATGAGCATAAGAAACAGTTTGCCTGTGGCCAATGTCCAAAATCGTTTGCCCTTAAAGAGCGTCTGCGTCTGCATATGCGTTTGCATTCGGGCGAGAAACCATATCCGTGTGCTTTATGTGATAAACGTTTTGCCAGGGGTGGTCAGCTTCAGCAGCATATGGTGTCGCATCACAAGACCAGCATACAGCAATTCAATTGCACAAAATGCTCGGCCAGCTTCTCAACCAATGCCAATCTGCGTGTACATATGGAACGACATGAGCAGGGAATGGAGCATAGATGTAGCATTTGTGAGAATCAATTTGCCAATGAATTGGCATTACGTGCCCACATCAATCAGGAGCATCATAAACTAACGAAATTTGATTGTGAGATTTGTCACAAGACAATAGAACCGGATGAGGATCTCGCCACTCATATGCAAAAGCATGCAGCTGTTAAAACGCATGTGTGTGAGGTGTGCAATTCATATTTTACACAAAAATCGCAATATAATGTACATATGCGTATGCATACAGGCGAACGGCCATATCAATGTCGAATATGTCATCAAACATTTGCCCATTCAAGTGTGCTGAAGCTGCACATACGAAAACACACCGGCGAGAAACCTTTTCGCTGTCTCCTCTGTACCGATGAAGTGGCATTTTCTCAACTGGCTCATCTTAAGAATCACATGAAGAAAATCCATAAACAACAAAAGCCATATATGTGTCATGGATGTCATGAGTTCTTCAAAATCAAAGTAGAGCTGCAAGCGCACGCCGAACACTGTGCCAAATGCCAAAAGTCAGCGGATGAGGATGATAATCAGAGCGACGATATTCAGGCATTATCCACAATGCGTTTTAATATGGCTGTGGTGCTCAAAAAGATTAGCTCGGCCCAAAAGCTACGACAATTGGGCTATGAGAAACGTCTGATTGATAATGTTATAATTGCCTCACTTAAATTGGCCCAACGACCGGCTCACGATGATGCCCAGCTTACACCTTTGGCACGATTAAGACTCAATGTGGAGGAGTTCCTTAAGTGGATTGTGCCAGCACCAACTATGCAGAAATTTAGCGAAGAGTTGCTATCGATTGAGACCATTCTTGATAAGATTGCAACTATGTATATGAAGCAAAAGTAG
Protein Sequence: MARSRRSLSKEDAVSLLTDSGISLSSPPAARDSSSPTTTTTTTSIKRRKSSLRDNNYAEAEDGEDGDTEQDSRDADYVQPLPKKSSRKSSIASSSASPSESCRRKQHICPHCSKEFGGKTDLQRHMLIHSDERPHKCAECGKCYRQAVNLKNHITTAHEHKKQFACGQCPKSFALKERLRLHMRLHSGEKPYPCALCDKRFARGGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANLRVHMERHEQGMEHRCSICENQFANELALRAHINQEHHKLTKFDCEICHKTIEPDEDLATHMQKHAAVKTHVCEVCNSYFTQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLHIRKHTGEKPFRCLLCTDEVAFSQLAHLKNHMKKIHKQQKPYMCHGCHEFFKIKVELQAHAEHCAKCQKSADEDDNQSDDIQALSTMRFNMAVVLKKISSAQKLRQLGYEKRLIDNVIIASLKLAQRPAHDDAQLTPLARLRLNVEEFLKWIVPAPTMQKFSEELLSIETILDKIATMYMKQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00612236;
90% Identity: iTF_00618578;
80% Identity: iTF_00483868;