Dpro014627.1
Basic Information
- Insect
- Drosophila prosaltans
- Gene Symbol
- -
- Assembly
- GCA_018151275.1
- Location
- JAECWY010001717.1:215489-220711[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.8e-12 2e-08 34.0 0.0 1 40 585 625 585 628 0.90 2 4 3.3e-13 7.6e-10 38.6 0.1 2 39 640 677 639 680 0.94 3 4 2.1e-16 4.7e-13 48.8 0.0 1 45 694 739 694 739 0.98 4 4 1.2e-19 2.6e-16 59.2 0.0 1 43 746 789 746 790 0.97
Sequence Information
- Coding Sequence
- ATGGGTTTGCTTCGCACCGCCGAGCAATTAAAAATCAAAGGACTTTGTGAGACAGCTGAAAATGCAGACGATTTAAATGATGCAGCAACTGCCACTATAACGGTGTCGGAGAACATACAACAGGCAGTTGTGGGTAATATAGTTAATGCAACAATAGTACCAGGCGAAGGCAACTCACCCACCGCAGTTGAACAGCAGCATCAACATCAACATCAGGTACAAAGTCAAACTCAGCAGGAGCAGCAGCAGTTAAGCGCCGCCTTTGGCAATACCGACAACCCATTGAGCGGGCAATTGCTTAGCTCGAGCAATTCAGTGAATGGTGAGCCGCCATCAAGGAAATCTCGGCCGAAACGCTCGAAGTCTTCAGATTTACAACAGCAACAGGAACACCATCAGCAACAGCAAACAATATTGATTCAGGGGCAAAATCAAACATCCATTGTGAGTTTGCATCAGACAGTGGACTGCAATTATATACCCGTGGGTGCCCCAGGGCCAGGTGAAGACTCGGACGTGGATAACGATCAAGAACTCGATCACGTGCACGAGCACGAGCACGACGAAGAGGTGCATGAGAGTAAACCAAATAAAATTTGTAAAACAGAGCAATCCTTGGTTTCACCCACATCAAATTCGTCCAATACTTCGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGAATGGCGGCCTATTAGGCGTACCCATGGGTTTTCTGGACTTTACACCCGAGCCACCAGCACCATCCGCCACACCAGTCACCGTAACGGAACACGTCGATCTCTCCTGTAATCCCAGCACAGATACGCGAGATCTATCAAATCCCACCGAACCGCTTGACATTGACAATCATTTGGCGCAACAAATCCATCGACTCGATCAATCTCCCATGCATTCAATAGCTCATCATCATACTGGCGATGAGAGCAACTCGAATTTGGTACAAGTTCAGCACATTAAAAGTGAAGTGATTGAAGCCAAACATTTATCGCTAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGACGCATTCGGATATTGGGGGGGCCACTGTTATGGAGATTGATCCGAGTCAAATAAAGCATGAGCCGGGCATGATAATTACGCCAGAGATTGTCAATATGATGTCCTCCGGTCATATGGATATGTATAATTCTGATACCAGCGAAGATTCCATGATGATTGCCAATGGCTCGCCGCACGATCAAAAGGAGCCGCACTATACAAATTTGGATCAAAAACATGGAATCCTTGGCGGCAGCAGCATTTGCGGCCCAGGTGGTGCTGGTGGTGGTGGTAGTGGTGGTGTTGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGTATACCATCGACCACTCTGTGGCAACGTGCTCATCGCCTAGGCATCGAAACGCCCAAGAAGGAGGGTGGCACGAAATCGTGGAACGAGGATGCATTACAAAACGCCTTGGAGGCACTACGAGCGGGTCAAATATCCGCTAATAAGGCATCAAAAGCCTTTGGGATACCGTCATCGACCTTGTACAAAATAGCCCGACGCGAGGGAATTAGATTGGCAGCACCGTTTAATGCAGCTCCCACAACATGGACGCCGGAGGATTTAGAGCGCGCATTGGTGGCAATTAGAGCGGGTAATACGTCGGTGCAAAAAGCAAGTGCCGAATTCGGCATCCCCACAGGCACACTTTATGGACGCTGCAAACGTGAAGGCATCGAACTCTCGAGATCGAATCCTACACCATGGTCTGAGGATGCCATGAATGAGGCCCTGAACTCAGTTCGTGTTGGGCAAATGTCTATCAATCAGGCGGCCATTCATTATAACCTGCCCTATAGCTCACTCTATGGTCGCTTTAAACGTGGCAAATATGATGTTGTAACTAATACTAGTGGAGTGTCGTTATTAAATACCTCAGGCAATACAACTGGAAGCATTGAGATTATTGAGCATAGTCAGGAAAATTCGGTAGGGACTGGTGTGCTAACAGGAATTCACAGTACGGCCTTCGGCAGTATATCAGCATTGGTTAGCGGCGGTCCAGGACCAGCAGCTGGGCAAGCAACAACAACAACAGCATCAGCTCCACCACCTCATCCTCCGTCAACATTACCGACTGGCACCAGTAAAAGAAAGAAAGCAACCAAACAAAAGCGTTAA
- Protein Sequence
- MGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATIVPGEGNSPTAVEQQHQHQHQVQSQTQQEQQQLSAAFGNTDNPLSGQLLSSSNSVNGEPPSRKSRPKRSKSSDLQQQQEHHQQQQTILIQGQNQTSIVSLHQTVDCNYIPVGAPGPGEDSDVDNDQELDHVHEHEHDEEVHESKPNKICKTEQSLVSPTSNSSNTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTGDESNSNLVQVQHIKSEVIEAKHLSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTHSDIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQKHGILGGSSICGPGGAGGGGSGGVAGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRAGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALVAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVTNTSGVSLLNTSGNTTGSIEIIEHSQENSVGTGVLTGIHSTAFGSISALVSGGPGPAAGQATTTTASAPPPHPPSTLPTGTSKRKKATKQKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00555764;
- 90% Identity
- iTF_00555764;
- 80% Identity
- -