Dpla000026.1
Basic Information
- Insect
- Drosophila planitibia
- Gene Symbol
- stc
- Assembly
- GCA_035043785.1
- Location
- JAWNMS010000009.1:216662-220544[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.4 1.1e+04 -3.6 0.5 15 18 358 361 357 362 0.79 2 14 2 1.6e+04 -4.1 1.6 15 19 385 389 384 389 0.81 3 14 0.01 84 3.2 2.0 4 11 418 425 417 428 0.92 4 14 2 1.6e+04 -4.2 1.4 6 10 456 460 455 460 0.87 5 14 6.3e-08 0.00051 19.9 11.5 1 18 466 483 466 484 0.93 6 14 2 1.6e+04 -6.2 3.9 7 13 488 494 488 495 0.74 7 14 2e-09 1.6e-05 24.7 12.9 1 19 524 542 524 542 0.98 8 14 2.3e-05 0.19 11.7 17.0 4 19 590 605 583 605 0.88 9 14 0.057 4.6e+02 0.8 11.6 1 11 645 655 645 667 0.79 10 14 4.7e-10 3.8e-06 26.7 15.5 1 18 672 689 672 690 0.97 11 14 1.4 1.1e+04 -3.6 1.5 6 10 719 723 718 724 0.61 12 14 2 1.6e+04 -6.5 9.2 9 18 736 746 726 747 0.77 13 14 2.6e-08 0.00022 21.1 12.6 1 16 783 798 783 806 0.95 14 14 7.9e-08 0.00064 19.6 12.5 1 19 816 835 816 835 0.96
Sequence Information
- Coding Sequence
- ATGGCCGAAtattggcaacagcagcaacaacaacagcagctacaacagcagcagcagcagccgccaacgcagcaacagcagctaacaAATGGAGCAGCAGCCCATAATGACTCAGTCGGTGCTGCTTCtatcgctgccgctgcctcaGTCGTTGCCTGCAATGGGcagagtaacaacaacaacaactatgttAACTTCAATCAGTTCATCACGCAGCATAATTTAAACAGCTCCAATCTTGGctacagcagcggcagcggcggtggCGTCGGCAGCGGCGGTGCCTTTGGCATGACgcccgccagcagcagcggcagcgctgCCAACAACTCCAGCTTTGGCGTCGGCCAATATGCGGCGCCTGTTTTTGGCTATCAGAATGGCGATGCCGCTGGCCAAAATTATCCCAATTTGTACTCAGCATTTGGCAGTAATCCATTTGCTGCGCCTGCTGCCGGCGGCGCCGCTTTCGATTTTAGCGCTTCCAAGCTGCAGGCGACGGCGCCCGAATTTGTGCCCAACTTCGCCAAGCTCAGCCTGTCGACGAgcaaagccaacagcagcagcagtaatagcaataataataataataataatagcaacaacagcaacactgcCACAATACAGCACACGCCACATGAGGCAGCTAGCAGCAATGCTCAACGAGGCTTGGCGAAGCCGCTGGCTGGCGGCAATAATactcggcagcagcagcgacgccaggACTATCGCGAAGATCGCCACGAGGATCGCTATGAGCGTGGCAAGAAGccacagaagcagcagcgctaTGACAATCATCGCAGCAACAAAAGACGCGACGACTGGAATCGCAATCGTGATCGCATCAATGGCTATCCGCGCGCCGCCGACGAACTggacaccagcaacagcaacgacagtGCGCAGCCATCGCCCGAGAAGCAGCTGCCACACCAAGTCTCCCCTCGGCGAGCGCCCGACAATGAGAAGCTGTCGCAGCGGGAGAAGCTGATGCGCGACATCGAGCAGCGGCGACTGGAGTGCTTAGTGTGCGTGGAGCAGATCAAGGCGCATCATGGCACGTGGTCGTGCCAGAACTGCTATCATGTGCTGCATCTCAAGTGCACCATCACCTGGGCGAGCAGTTCCAAGTCGGCGGAGGGCTGGCGCTGTCCAGCCTGCCAGAATGTGCTGCAAGAGTTGCCGCGCGAATATCTCTGCTTCTGTGGCAAGTTGAAGAATCCGCCGCTCACACGCAACGAGCTGGCGCACACTTGCGGCGAACTCTGCTGTCGCGTCGAGGGCTGCAGCGAACGTGTTGCGCAGCTGTGGCTGCGGACGCACCTCAAGATGATGCAGTGCGCCAtgaagcagcaactgcagtgCGAGGCCACCTGCGACAAGCCACTCAACTGCGTCGAGCATCGTTGCCAGCAGTTGTGCCATGCGGGCAAATGTGAGCCGTGTGCGGAGCAGGTGGAGCAACATTGCCactgtggcaagcagcagcgcGAGGTGCTCTGCACCAAGGAGAGTCAGGATAGGCGCAGCTATTCGTGCAAGGAGTGCTGCGGCAAGCCGTTGCCCTGCGGCAATCACAAGTGCAAGGATTCGTGCCACGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCGCCGCAGATCACCAGTTGCCCCTGTGGCAAGTTGGCAGTGCCTCCGACGCAGCGCAGCAGCTGTCTGGATCCGGTGCCGACGTGCGAGGGCGCGTGTAGCAAGACGCTGCGCTGTGGCAAGCCGGCGCATCCGCATCAGTGCGCCAGCAAATGCCATTTGGGGCAGTGTCCGCCGTGCCCCAAACAGACGGCCGTCAAATGCCGTTGCGGCCACATGGATCAGCTGATCAAGTGCCGCCAGCTATCAACCCGTGCGGACGATGCACGCTGCAAACGCCGTTGCACGAAGAAACGCAGTTGTGGCAAGCACAAATGCAACGCGGAATGTTGCATCGACATCGACCATGCCTGCCCGCTGCCCTGCAACCGAACGCTGAGCTGCGGCAAACACAAGTGCGATCAGCCCTGCCACCGCGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGCGCCGAAGTGATCTATCCACCGGTGCCGTGTGGCACCAAACGGCCGCCCTGCAAACGGCCCTGTTCGCGCACCCACGGCTGCGAGCATGTACCGCAGCACAGTTGCCATGCGGCGGCCACCTGCCCGCCCTGCATGATGTTCACCACGAAGTGGTGCCACGGCAATCACGAGCAGCGCAAGACGATACCCTGCTCGCAGGCCAGCTTCAGCTGTGGCTTTCCCTGCGCCAAGCCGCTCGCGTGTGGCCGCCATAAATGCATCCGGCCGTGCCACGAGGGCGAGTGTCCGCAGCAGCCGGGCGAGCTGTGCCGCCAGAGTTGCACCAAGCCGCGTCTGTTGTGCGGCCACAAGTGTGCCGCTGTCTGCCACGATGGCGCCTGTCCGGAGACGCCGTGCAAGGAGCTCGTTGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAACTTGCCCGCGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAAATACTCGCAcccaccaaaaacaacaaatccaaCAAAACCTTGGACTGCAACGAGGAGTGTCGTCTGCTCGAGCGCAATCGCCGCTTGGCCATTGGACTGCAGTCTCGAAATCCGGAGTCGCAGCTAAAGTCGCTGACGAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAACGCAATCCGGTGCTAACCAAGAGCGTCTACGAAACGCTCAGCGATCTGGTCAAACTGGCCAAGGAGAGCAAGCAAAAGTCACGCAGTCACTCGTTCCCCACGATGAATCGCGAGAAGCGTCAAATGGTGCACGAGCTGTGCGAAGTGTTTGGCGTGGAGTCCGTCTCCTATGACAAGGAGCCCAATCGCAACGTGGTCGCCACCGCGCACAAGGAACGCtGCTGGTTGCCCGCCACTAGCGTTATGGAGGTCCTGGCCCGCGAGTCCGGTCAGCGTCGCGTCCCGGTGCCCAGCAACAATGCCTGGGGCCTCAAGAAGTAG
- Protein Sequence
- MAEYWQQQQQQQQLQQQQQQPPTQQQQLTNGAAAHNDSVGAASIAAAASVVACNGQSNNNNNYVNFNQFITQHNLNSSNLGYSSGSGGGVGSGGAFGMTPASSSGSAANNSSFGVGQYAAPVFGYQNGDAAGQNYPNLYSAFGSNPFAAPAAGGAAFDFSASKLQATAPEFVPNFAKLSLSTSKANSSSSNSNNNNNNNSNNSNTATIQHTPHEAASSNAQRGLAKPLAGGNNTRQQQRRQDYREDRHEDRYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDTSNSNDSAQPSPEKQLPHQVSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHTCGELCCRVEGCSERVAQLWLRTHLKMMQCAMKQQLQCEATCDKPLNCVEHRCQQLCHAGKCEPCAEQVEQHCHCGKQQREVLCTKESQDRRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPPQITSCPCGKLAVPPTQRSSCLDPVPTCEGACSKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRPCSRTHGCEHVPQHSCHAAATCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGFPCAKPLACGRHKCIRPCHEGECPQQPGELCRQSCTKPRLLCGHKCAAVCHDGACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPESQLKSLTKYSEFLRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00472738;
- 90% Identity
- iTF_00607498;
- 80% Identity
- -