Dpha009213.1
Basic Information
- Insect
- Drosophila phalerata
- Gene Symbol
- -
- Assembly
- GCA_951394115.2
- Location
- OX596005.2:23175831-23182207[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.044 4.3 8.5 0.3 1 23 1318 1341 1318 1341 0.94 2 13 8 7.9e+02 1.4 0.2 1 23 1501 1523 1501 1523 0.91 3 13 0.00018 0.018 16.0 2.7 2 23 1526 1547 1526 1547 0.97 4 13 6.9e-05 0.0068 17.3 0.2 3 23 1555 1575 1553 1575 0.98 5 13 5.7e-07 5.6e-05 23.9 4.1 2 23 1582 1603 1581 1603 0.97 6 13 5.1 5e+02 2.0 0.4 5 23 1616 1634 1613 1634 0.95 7 13 1.3 1.3e+02 3.8 5.4 3 23 1641 1662 1639 1662 0.93 8 13 0.14 14 6.9 0.2 2 23 1673 1693 1672 1693 0.96 9 13 5.5e-05 0.0054 17.6 0.4 1 19 1699 1717 1699 1721 0.95 10 13 1.6e-05 0.0016 19.4 0.5 1 23 1729 1751 1729 1751 0.98 11 13 0.0001 0.01 16.8 7.6 1 23 1757 1779 1757 1780 0.96 12 13 0.0002 0.02 15.9 5.9 1 23 1785 1807 1785 1807 0.98 13 13 0.028 2.8 9.1 8.2 1 23 1813 1835 1813 1836 0.95
Sequence Information
- Coding Sequence
- ATGGTTGAGAGTGTGCAGTGTCCCGTGTGCACCCTGTATTTGCACGCGGGCATGAATCTCTCGGATCATTTGGAGACACATCCCAAGGAGCAAGTCATCAAAGCGCTGGTGCAAATGACAATCGTCGGCAACAATGCAATGGGCGGCGCCCTGGTGGCAGCTGCCCTCTCCACTGCCGGCAGTGGTGCATCAACAGACGgcgcctcctcctcctcatcaCCTCCAGAAGCTGATGTGAAACCAGCTGtggcagcaaaagcaaaacaaccAGCAGCtgtaacagcagcaacaacagcagcagcaccaccaccaccaccaccaacaacaacaacaacaacaacaccattagcgacaacaacaacattaaaatcAACAACACCCAAGTCTGCATCATTGCTGGTAAATACAAGTatcaacaacaccagcagcagttgcagcaacagcaacaataacaaattgagCAATCCACCGATTAAGGCAGTTAAAAGCGCGCCACCCTCGACTGAGGCGTCAGCCACCACATCCACCACACCCACCATAAGCAGCGTGTCCGCTGCCTATCCGCCATCGCTGACATCCGACTATCGCTTcgatcagcagcagcagcagcaacaacaacaacaacaggcgaCGCCAACGGCAACACTTCACGGCTTTCCACGCGGTGCCACCACAATGCTGGTGATACCACAAGCAccacaacatcagcagcagcatagTTTCCTGGCCACCCAGCAGCCTGGACATTTTGcccatcagcaacaacaacaacagcagcagcagcagtcggCTATGAAGTACACGTATGCAACAACGTTGCCTCCGCCACCGCCGCCTCTGCAGCTCTTCGCACAGCAGACGACAACATCGCAGTCGCATCAGAAGCCACCGCCCGCCTATGGCGCCGCCATCAGTCAAATTCGATCTCAGCACAACCAAAacaagcaacatcaacagcaacagcaacaacatataACCGTACAACATAATGTTAACCTAGCACCACCGAGTGGGAAGCACAGCAAGGCCCATACGGAGATCTTTCTGAAtccaccgccaccaccaccgccacagTCCACGATGCCGGCTTCATCGACCTCCTCGTCCGCCTCCGCCACCACCTCTTCCTCAAGACTGCAACATccacaacagcatcagcaatcCCTTacagccagcagcagcagctatgTAGCAGTGAATTGCTCCAGCTCCACATCGAGTCTGATTTCTGCGACAAACGGACGAGGCATCAGTCGCCAGTCGACCAATTCGCCATTTGGTGCACTGCTTAATGCAGCGGCACAGGCTGCGAGTTCTTCGCCCGCCTCCTCTAGCGCATCTGTGTTGCGTTACGCCGAATCGCCGGTGGCCCACTATCTGGAGCGGGACAACGGTGACTTTATTTTCCAAGAGACGCCCAAACACATTGTCGAGTGCGTCGAAAAGGATGATGGTGAATTCTCAGTGATTGAACGCATCTATCAGTCGCCACCCAGCGTGTTGCACATTCACGACGATGACGAAGAAGATGAGGAGCACAGTTGGGCAAACAGCGAAGATGAGGATCACGTCAAGGCACATAACAATGTGGAGGATGGCGATGATGAGCGTGACGACAGCCGCAGCAGAGTTGGCCTTAAGACGACAACGAAAAAGTCACGTAAAATCAAATCGAGTGGGAGAATCCACAAGCGCTCGTTGTCAAAGCACCAGATGATTACGACGGAAGATGAGGAAGAGTTCCTGAGTATAGGCAGCAGCGAAGAAGAGGAACAGACTGAGGAACAGCCGCAGTCGTCAGGTGTTGCCCAGGTGGCATCACCGTCTCCGCCGCAACTTTGCACGGCGCCTTCTACAAGCAGTGGAGCTGCTCCTGCAACTTCAGGCATTGTCAATTCCACGTCCAGCGGTACCATTAAGTCAAAAAAGAATCGCGTTACAGTTCTGAGCGATGTGCCGCTCAATATGAATGAGTATCTGGATCTGGTGGGTAACATTGTGGCTTCGAGTCGCATAGGCGCCGCTCGCCCATTTGCCGCTGTGGCGCCAATTCCGTTGGTCAAGGTGGAAAAGGAGGAACCGCTGGATGAATATGACAGCGTTCCGACCGAGACTCAACCCATGGAACACAAGCCCAGTTTAGAACATGCCAGCGGCAGTAGCAGCAGtagtagcagcagcagtaatGGACGCGGAACCACTAGCGTCATTCGAATGGCCAGCACAAGCAGCAGCACCAATGTTCCGGCTGAGGATCTCACACAACCGCCGGCCATGAAAGTCGAGGTAGAGCCAACAATGCTGCTGCCACAACGCTTCTCAGCACCAGCGCAACAGCGTGGACCCAAGAAATTAGTCATCAAACCAAAGGccacagcaacggcaacagcgacgtcgacgacgacgacggaaAAGACTGATAACAATTCTGCCAGCAtgagaagcagcaacagcgtcGAATCTCTCAGCATATCAAAAGCGCCTGCAGATCTGGTGCAGATCAAGAGCGAAAGTGTGGAACCATCTACATCGAGTGGCAGCATCCTAGAGAAGCATCTAACCACCAGCTACACTGGACAACAAGCACGCAAACACTCAACAGTAAACGATGATGATGCTCGTGTGCTGCTGGAATTTGCCAACTCGAAGCAACAACCGCTGGCAGGCACCAATCCCACGACATTTGTGGTAAATGCTGCCAGTTTTGCATCAGCGGGGTCTGTATTTGCCAGCAACATTGACAAGCATCCAAACAAGCCGGGTGACGAGTACATTCTGCCTGATGATAACAAAGTGGAAATAGATGAAATTGTGATATCCTCCTCGTCTTCCTTTGCTTCCTCCACGCAGCAAGCGCAGCAGCTATCGCAGCCACATtcgcagcagcatcaacaggcAACTCCAGCAGTTCAAGCCACGTTGCAGCAGTCACAGCCGCCTACCTTTAATGACTTTAACTTTATGTACCACCAAAataccacaacagcaacaacgacaccGATTGCTTCCAATTTTGCACCATTCGGTcttcagcaacagcagcaacaacaaccacatggTTCAAGCGAAGCCACCAATGCAGCGACACTCGCCTCGTCCTCCAGTAACTCGTCAGCATTGGATCATGAATCCTCCATGAATGCCACGTTCCGCGTGGCCAAGCCACAGTCTTCACTGAGTGTGTGGTAtcagccacagcagcaacaacatcaacatcaacagcagcagcagcagcaacaacaacaacagcaaccacagccGACAACCTCTCAGAATGTGGAACAGTCGAGCAATTTTATTGCAGCATTGGCAGCCGTCGATTGTTGTAGTGTGGCGATGGACAGTGACGCGAGTGATGCTAAGTACTTGGATCTGGATGCTTGTAAGCGGGAACAGTTGAGCAATAGCAGCAGCCACTTGCCCTCTGCCTCGGCATCCACATCTACAACATCGTCTTCATTCGCTGCTGCAGCCACAGAGAGCAGTCTCGTTGGTGGCTTGGGATTAAACATTCGCACTGATGAGAAGATGCCCGCAAAGGGTGAAATTTCCGAGCAGGAGAGCAACTGCGACATTGAGAACTCCTGGAGTCAATCGATGTATGGAGACATATCACAGCGGTACTTTAGAAATCAATTCGCAGATGGCTACAACCAACAGTTGACCGATTGGCGTCAGGACTATTATCCTGCGCAGGATCTCAGtggtcagcagcagcagcgtgaGCACAAACGATTTGATTTCAATGCGGTCGCATCTGATTACGCGCAGCCGGGTGAGCTGGACGCCTCCTCGAGCTCTGCCAGAAGCAATCAATTGCTGGATGTGCAGCCCACTACATCATCATCGGCTTTGCTGGCTGGCCCACCAATTGCCTCGACATCCAGAGCTGCCGCCGAAGCGGAAGCAGTCGCTGCCGCATTGCAAAGGAAACCCGCCCGTCGCAAAATCTACAAGTGTCCACACTGCGTGGCCATCTTTGAGAAGCTAAAAGATCGCAATGCACATATGATTGGAGAGCACAACTACGTGCGCCAGAATCGGCGACTCATCTGTACGCAGGCGGTGGTCAATGCCGCCTTGCTAGCACAGCCGCAggttcaacaacaacaacagcaacagcagttgttgctgcaggCAGGTGGTAGCATTAGTGAGGCCCTGCATGAAGATTCCAAGGATGGCATTGTTAAGATCAAACAGGAGCACTGTCAGGACAAGCCCGATTCATCGGAGCAGCTACTTGACCATTTGGAGCTGCCGGATGTAAAAGATGCAGACTTATTAGACGTTAACGGTGAGAATGGACGTGATGCGGACGTGAAACCTTCTACGAACATGACTGATCTGAAGCCGACTATTACGCCTTTGGCTATGACCACGCCAGCTGCCAAGTTGGCGGCGATATATCGTATGCTCATTTCCTATAATGAATCGAAGCTTGGACAGGAGCATCACAGCCTCAGCGAGTTGGAGCAAAAGGCCATGGAGAAATCCATATTTCTGTGCTACGTCTGTCGTACCGATTTCCCCTCTGTGAAACTGTACGATGCACATCTGACCGAACATCCCGCAGAGTGCTTCACCTGTGGCAAGAAATTTTATCGTTGGAAAAACTTTTCACTGCATCTAAAACGTCATCTGGGTTGGAAGGAGTTCGGTTGCTATGTCTGCGATAAGAAATTCGTTGTGCGCAGTGCCCTCGTCGAGCATATGCGGATGCACACTGGCCAAACCCCGTTGAAGTGTAAGATATGCGGTAAAAAGTTCAAACGTTACTCCAACTTGACTCAGCATCGAAAGCGCCACACCAAAATGACGGTGCGGAAAAAGGAATATGTGTGTCATTGCGGCGAAGTGTTGCCCTCGAAGGCACGTTTTCTGTGGCATAAGGAAACGCACGATTTGAAGCCCAAGTGCTGCCCATATTGCTGCGATCGATTTGTGCACGCCAATTCACTGCGTCGACACATCCGGCTGGCCCACTCGGACAAGTTTGACTATGCTGAGCCAATGGAATGCCCCATGTGCAAGCAGATTTTTGCCAAAACGTCCATCAAGGCACACATGGCTACGCACTCGACGGATCCTCAATACGATTGCGCCATCTGCAACAAGAGCTTCTCCACAAAATGGAATCTCAAGATACATTCGTGGGTGCACGCCAATCGCACAGCCAAACCGTTCAAATGCGAGTATTGCCCCAAAGCTTTTGTACGCGAGTTGGACTTTAAAAATCATATGAATGCACATAAGCAAATAAAGCCGTATACCTGCGAGTACTGTGGTTGCAAATTTATACGCAAGTACAACTACATGCGGCATCGGCGGGAGCATCATGGCAACAAGAAGTTCACCTGCGATCAGTGTGACAAATCTTTTCATCGACACTATTATCTAATTGAGCATCGTCGCATTCACACTGGCGAGCGACCTTTCCACTGCACCATCTGCGGCAAGAGCTCGACCACGAAGACCAATCACAACAAGCATCTGAAGATCCATCATTCGCGCGATCCCTTCACCGTGGAGGTCTAA
- Protein Sequence
- MVESVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNNAMGGALVAAALSTAGSGASTDGASSSSSPPEADVKPAVAAKAKQPAAVTAATTAAAPPPPPPTTTTTTTPLATTTTLKSTTPKSASLLVNTSINNTSSSCSNSNNNKLSNPPIKAVKSAPPSTEASATTSTTPTISSVSAAYPPSLTSDYRFDQQQQQQQQQQQATPTATLHGFPRGATTMLVIPQAPQHQQQHSFLATQQPGHFAHQQQQQQQQQQSAMKYTYATTLPPPPPPLQLFAQQTTTSQSHQKPPPAYGAAISQIRSQHNQNKQHQQQQQQHITVQHNVNLAPPSGKHSKAHTEIFLNPPPPPPPQSTMPASSTSSSASATTSSSRLQHPQQHQQSLTASSSSYVAVNCSSSTSSLISATNGRGISRQSTNSPFGALLNAAAQAASSSPASSSASVLRYAESPVAHYLERDNGDFIFQETPKHIVECVEKDDGEFSVIERIYQSPPSVLHIHDDDEEDEEHSWANSEDEDHVKAHNNVEDGDDERDDSRSRVGLKTTTKKSRKIKSSGRIHKRSLSKHQMITTEDEEEFLSIGSSEEEEQTEEQPQSSGVAQVASPSPPQLCTAPSTSSGAAPATSGIVNSTSSGTIKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGAARPFAAVAPIPLVKVEKEEPLDEYDSVPTETQPMEHKPSLEHASGSSSSSSSSSNGRGTTSVIRMASTSSSTNVPAEDLTQPPAMKVEVEPTMLLPQRFSAPAQQRGPKKLVIKPKATATATATSTTTTEKTDNNSASMRSSNSVESLSISKAPADLVQIKSESVEPSTSSGSILEKHLTTSYTGQQARKHSTVNDDDARVLLEFANSKQQPLAGTNPTTFVVNAASFASAGSVFASNIDKHPNKPGDEYILPDDNKVEIDEIVISSSSSFASSTQQAQQLSQPHSQQHQQATPAVQATLQQSQPPTFNDFNFMYHQNTTTATTTPIASNFAPFGLQQQQQQQPHGSSEATNAATLASSSSNSSALDHESSMNATFRVAKPQSSLSVWYQPQQQQHQHQQQQQQQQQQQQPQPTTSQNVEQSSNFIAALAAVDCCSVAMDSDASDAKYLDLDACKREQLSNSSSHLPSASASTSTTSSSFAAAATESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFADGYNQQLTDWRQDYYPAQDLSGQQQQREHKRFDFNAVASDYAQPGELDASSSSARSNQLLDVQPTTSSSALLAGPPIASTSRAAAEAEAVAAALQRKPARRKIYKCPHCVAIFEKLKDRNAHMIGEHNYVRQNRRLICTQAVVNAALLAQPQVQQQQQQQQLLLQAGGSISEALHEDSKDGIVKIKQEHCQDKPDSSEQLLDHLELPDVKDADLLDVNGENGRDADVKPSTNMTDLKPTITPLAMTTPAAKLAAIYRMLISYNESKLGQEHHSLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMTVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00537699;
- 90% Identity
- -
- 80% Identity
- -