Basic Information

Insect: Drosophila phalerata
Gene Symbol: -
Assembly: GCA_951394115.2
Location: OX596008.2:18899723-18906938[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.5e-05 0.0025 18.7 2.1 1 23 274 296 274 296 0.97

2 18 8.2e-06 0.00081 20.2 0.4 1 23 302 324 302 324 0.97

3 18 0.0012 0.12 13.4 0.9 1 23 330 352 330 352 0.95

4 18 1.7e-05 0.0017 19.2 3.1 1 23 358 380 358 380 0.97

5 18 3.9e-05 0.0039 18.1 4.7 1 23 386 408 386 408 0.99

6 18 7.2e-05 0.0071 17.3 5.7 1 23 414 436 414 436 0.97

7 18 3.5e-07 3.5e-05 24.5 4.3 1 23 442 464 442 464 0.98

8 18 1.3e-07 1.2e-05 25.9 2.4 1 23 470 492 470 492 0.97

9 18 7.4e-05 0.0073 17.2 6.7 1 23 499 521 499 521 0.97

10 18 0.00013 0.013 16.5 6.5 1 23 527 549 527 549 0.98

11 18 1.1e-05 0.0011 19.8 4.5 1 23 555 577 555 577 0.98

12 18 8.3e-06 0.00082 20.2 8.1 1 23 583 605 583 605 0.98

13 18 6.8e-06 0.00067 20.5 7.6 1 23 611 633 611 633 0.97

14 18 7.6e-07 7.5e-05 23.5 7.7 1 23 639 661 639 661 0.98

15 18 0.00024 0.023 15.6 9.5 1 23 667 690 667 690 0.95

16 18 8.4e-05 0.0083 17.1 0.9 1 23 696 718 696 718 0.98

17 18 0.00089 0.088 13.8 4.4 1 23 728 750 728 750 0.98

18 18 1e-05 0.001 19.9 1.6 1 23 756 779 756 779 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.5e-05	0.0025	18.7	2.1	1	23	274	296	274	296	0.97
2	18	8.2e-06	0.00081	20.2	0.4	1	23	302	324	302	324	0.97
3	18	0.0012	0.12	13.4	0.9	1	23	330	352	330	352	0.95
4	18	1.7e-05	0.0017	19.2	3.1	1	23	358	380	358	380	0.97
5	18	3.9e-05	0.0039	18.1	4.7	1	23	386	408	386	408	0.99
6	18	7.2e-05	0.0071	17.3	5.7	1	23	414	436	414	436	0.97
7	18	3.5e-07	3.5e-05	24.5	4.3	1	23	442	464	442	464	0.98
8	18	1.3e-07	1.2e-05	25.9	2.4	1	23	470	492	470	492	0.97
9	18	7.4e-05	0.0073	17.2	6.7	1	23	499	521	499	521	0.97
10	18	0.00013	0.013	16.5	6.5	1	23	527	549	527	549	0.98
11	18	1.1e-05	0.0011	19.8	4.5	1	23	555	577	555	577	0.98
12	18	8.3e-06	0.00082	20.2	8.1	1	23	583	605	583	605	0.98
13	18	6.8e-06	0.00067	20.5	7.6	1	23	611	633	611	633	0.97
14	18	7.6e-07	7.5e-05	23.5	7.7	1	23	639	661	639	661	0.98
15	18	0.00024	0.023	15.6	9.5	1	23	667	690	667	690	0.95
16	18	8.4e-05	0.0083	17.1	0.9	1	23	696	718	696	718	0.98
17	18	0.00089	0.088	13.8	4.4	1	23	728	750	728	750	0.98
18	18	1e-05	0.001	19.9	1.6	1	23	756	779	756	779	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTGAGCGCTGCCAGTTCGGCACCTTCGGTGGTTTCAGCACCGGTGGTGACCACTGGCGGTGGCACCACCATCACGTTAGGCGGACCTCCGCCATTACCGCCAAATAAATTAGATCATCATAATAAAGGAGAGGACGTCGGCAAGCAGCCGCCACACGGCATTGAAATGTATAAAGTGAACATTGAGGATATATCGCAATTATTTACGTATCACGAGGTCTTTGGCAAAATCCATGGCGATGTGGTGAATCATGTGGCGGCGGTGCATGGCAGTCAGTTGCCACCGCCACAactgccaccgccaccgccactgCCACCGCAGACGACGCATTCGGCTAgcgcagctgcagcagcagcggcggcgTCCACAAATAATGCAGCCGTCGCTGCTGTAATGGCTTCGGCcaatgcagcagcagcggctgcAGCGGCCGCCTCAGCAGCGGCATCAgctcaacagcagcaacaacaacaacaacagcaacaacaacaacagcagcaacaacagcaagcacagcaacagcaacaacaacagcaatcagTGACAAGCACAAATGCTGGAAGTCAGCAGGGCAGCGCCACGGTGACCACGACTAGCTCAGGTAGCAACGGGAACAATAACAATGGGGGTAATAATgggggcaacaacaacaacaacaacaataataataataataataacaataacaataattcgacaacgacaacgggtGAATTGCTAATGCCAAAAATGGAGGGCGGCATTCATGGCGTCGATGGTCAGTCGAGCGTTTCGTTGGCGCCGGATGGCACGCCCATTGCGACTGGTACGCATGTGTGCGATATTTGTGGCAAGATGTTCCAGTTTCGTTATCAGCTGATTGTGCACCGTCGCTACCACAGCGAGCGTAAGCCGTTTATGTGTCAGGTGTGCGGTCAGGGCTTTACCACATCGCAGGATTTGACCCGTCATGGCAAAATCCATATTGGCGGTCCCATGTTCACCTGCATTGTTTGTTTCAATGTGTTTGCCAATAATACAAGTTTGGAGCGACATATGAAAAGGCATTCAACGGACAAACCATTCGCCTGCACCATTTGCCAAAAGACTTTCGCACGCAAAGAGCATCTGGACAATCATTTTCGTTCGCATACGGGCGAAACGCCGTTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTCACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCGCATCAGTGCGATGTCTGCGGCAAGAAATACACTCGCAAGGAGCATCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGCGAAATCTGCGGCAAGAGCTTCAGCCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGCGAGACGCCGCATCGGTGCGACTTCTGCTCCAAGACGTTCACTCGCAAGGAGCATTTGTTAAATCACGTGCGCCAGCACACGGGAGAGTCGCCGCATCGCTGCTCCTACTGCATGAAGACGTTCACGCGCAAGGAGCATCTGGTGAATCATATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACACGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGTACATACTGCACGAAGACGTTTACCCGTAAGGAGCATCTAACGAATCATGTGCGACAGCACACGGGCGATTCGCCGCATCGTTGCAGCTATTGCAAGAAGACGTTCACCCGGAAGGAGCATCTGACGAATCATGTGCGCCTTCACACTGGAGATTCGCCCCATAAATGCGAATATTGCCAGAAGACCTTTACACGCAAGGAGCATCTCAATAATCATATGCGCCAGCATTCAAGCGACAATCCCCATTGTTGCAACGTTTGCAACAAGCCCTTCACCCGCAAGGAGCATCTGATCAATCATATGTCACGCTGTCACACCGGCGATCGCCCCTTCACCTGCGAGACATGCGGCAAATCTTTCCCCCTCAAGGGTAATCTACTTTTCCATCAACGCAGCCATACCAAGGGCCAGGAATGCGAACGTCCATTTTCCTGCGAAAAATGTCCCAAGAATTTCATATGCAAAGGTCACTTGGTCTCGCACATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACACTGTGCAGCAAGGCTTTCGTCGAGCGGGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCAATGATGCCGCCACCACCCgtgcatccgcatccgcaaaTACCGGCTGGTGTGCTGACCCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCGCATCACTCGGCGACGACAACAATGCACACCATCCAACAGATTACAGCTGGAGCTGCTGCAGCTGGAGCCGGTGCCGTCCAGCTAACGCCCGGATTGGTGCCGCTGGTCACCAGCACGCTCATCTCGCACAATGCCCAGCAATCGCAGAAGCAACAGCaggcggcagcagcagttgctgcACAACAGCAAGCGGCAGCAGCTGCGGCTGCACAGCAACaggcggcggcagcagcggccGCACAACAGCAGGCAGCAGCAGTGGCacatcagcagcatcagcaacaggttgctgcacagcagcaacaacagcaacagcaggcgGCAGTGGCAgcacatcagcagcagcaacagcagttgcagcagcaacaattgctgcaATTATCGATACAACAGGCGgcacatcatcatcagcaacatcagcagcaacaacaacagcagcagcaacatcatcagcaacaacagcaacaggcacATCCACAGGCAccgccacagcagcaacaacagcaacagccaccGCCACAGGTGCCCATTGCCTTGATAAGTGATCCAAGTGCATTGGCACGTGCTGccatgcaactgcaacatctGCCCAGCAATGTTGAGCAACATCCGGTGGTTTACTAA
Protein Sequence: MQHVSAASSAPSVVSAPVVTTGGGTTITLGGPPPLPPNKLDHHNKGEDVGKQPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHVAAVHGSQLPPPQLPPPPPLPPQTTHSASAAAAAAAASTNNAAVAAVMASANAAAAAAAAASAAASAQQQQQQQQQQQQQQQQQQQAQQQQQQQQSVTSTNAGSQQGSATVTTTSSGSNGNNNNGGNNGGNNNNNNNNNNNNNNNNNSTTTTGELLMPKMEGGIHGVDGQSSVSLAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAAAGAGAVQLTPGLVPLVTSTLISHNAQQSQKQQQAAAAVAAQQQAAAAAAAQQQAAAAAAAQQQAAAVAHQQHQQQVAAQQQQQQQQAAVAAHQQQQQQLQQQQLLQLSIQQAAHHHQQHQQQQQQQQQHHQQQQQQAHPQAPPQQQQQQQPPPQVPIALISDPSALARAAMQLQHLPSNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560429;
90% Identity: iTF_00560429;
80% Identity: -