Dpha014808.1
Basic Information
- Insect
- Drosophila phalerata
- Gene Symbol
- foxg1
- Assembly
- GCA_951394115.2
- Location
- OX596006.1:38860606-38861715[-]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.3e-38 8.3e-35 119.3 0.0 2 85 72 154 71 156 0.97 2 3 0.12 1.5e+02 3.1 0.1 2 27 217 242 216 248 0.94 3 3 0.6 7.9e+02 0.8 3.3 33 71 313 350 288 359 0.82
Sequence Information
- Coding Sequence
- ATGGATACATCACCTGTTTTTCAGTCAAGTTTCTCGATCAGATCGTTGCTCTCGGAGGACAAACGTGAGAAGGGACATGAGTATTATCTCAGTTCGAGTCCAAGTGATTCGTGCAACAGCTCCGAGGATGCCTCCTCCGATGATGGCACTACAAATACCACGAGTCCATCAACTTCTGGCatcaacagcaataataatGGAAAGTCGGATGCCAAACCGGCTTTTACGTACAGTGCTCTAATTGTGATGGCCATAAGGAGAAGTCCAGAGAAGCGTCTAACATTGAGTGGCATCTGCAAATGGATTGCTGATAATTTTGCATATTATCAGAATCATAAAAGTGTTTGGCAAAATTCCATACGACACAATCTCAGTTTGAATCCGTGTTTTGTGCGTGTTCCACGTGCTTTGGACGATCCAGGACGTGGCCATTATTGGGCATTGGATCCGTATGCGGAGGATCTAACAATTGGCGAGACAACGGGACGCTTGagacgcagcagcaacaacaacagcaacatattTATGGGACGCTCcaaggcagcagcaacagcggcagcatTGCAAGGACATGTCAAAGGTTATGGGATGCATCCTTATCAGCAGCTTAAcactgcagctgcagctgcattCTATGCACAGTTATTTAAGCCACATGCCACCTACTTTCCCATCATGCCAGAGgcagcacaacaacagcagcaacagcaactgcaactgcaacagcaacagcagcatccaATGATGTTGCAGGGCAATCAACatgcaactgcagctgccACAGCAATGGCTAAGGACTCATTGGCTAtgacaacggcagcaacataTCGTTaccagcatcagcaacagcatcagggCAACTTATCGCTGCAGtatcatcagcaacagcaacagcagcaactgcaacagcaacctTTGCTTCAACCTCAacacagcagcaaccacaacaattaCTACCagagacaacagcaacaacaccaatatCAACACCAACACAATTATTatctacaacagcaacatcagcaacaacagcagcaacaacatgaacCTTATGCTTCTTCTCTTGCCGCCAAATGGCCAAAACAACCAATTGAATGTATGTGGCGTTAA
- Protein Sequence
- MDTSPVFQSSFSIRSLLSEDKREKGHEYYLSSSPSDSCNSSEDASSDDGTTNTTSPSTSGINSNNNGKSDAKPAFTYSALIVMAIRRSPEKRLTLSGICKWIADNFAYYQNHKSVWQNSIRHNLSLNPCFVRVPRALDDPGRGHYWALDPYAEDLTIGETTGRLRRSSNNNSNIFMGRSKAAATAAALQGHVKGYGMHPYQQLNTAAAAAFYAQLFKPHATYFPIMPEAAQQQQQQQLQLQQQQQHPMMLQGNQHATAAATAMAKDSLAMTTAATYRYQHQQQHQGNLSLQYHQQQQQQQLQQQPLLQPQHSSNHNNYYQRQQQQHQYQHQHNYYLQQQHQQQQQQQHEPYASSLAAKWPKQPIECMWR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00601577; iTF_00584991; iTF_00533611; iTF_00506668; iTF_00585773; iTF_00568783; iTF_00470675; iTF_00518968; iTF_00610457; iTF_00608251; iTF_00557715; iTF_00583486; iTF_00528607;
- 90% Identity
- -
- 80% Identity
- -