Basic Information

Insect: Drosophila persimilis
Gene Symbol: -
Assembly: GCA_003286085.2
Location: NW:1749620-1755627[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1e-07 5.7e-06 26.2 1.8 2 23 136 157 136 157 0.97

2 9 1.3e-07 7.4e-06 25.8 0.5 1 23 163 185 163 185 0.98

3 9 1.2e-07 6.6e-06 26.0 1.1 1 23 191 213 191 213 0.98

4 9 7.1e-07 4e-05 23.5 0.7 1 23 219 243 219 244 0.95

5 9 4.2e-05 0.0024 17.9 3.1 1 23 249 271 249 271 0.97

6 9 0.0019 0.11 12.7 3.3 1 23 277 300 277 300 0.97

7 9 0.00037 0.021 15.0 1.9 1 23 306 328 306 328 0.99

8 9 4e-06 0.00023 21.1 0.8 1 23 333 355 333 355 0.98

9 9 0.00096 0.054 13.6 0.5 2 23 362 386 361 386 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1e-07	5.7e-06	26.2	1.8	2	23	136	157	136	157	0.97
2	9	1.3e-07	7.4e-06	25.8	0.5	1	23	163	185	163	185	0.98
3	9	1.2e-07	6.6e-06	26.0	1.1	1	23	191	213	191	213	0.98
4	9	7.1e-07	4e-05	23.5	0.7	1	23	219	243	219	244	0.95
5	9	4.2e-05	0.0024	17.9	3.1	1	23	249	271	249	271	0.97
6	9	0.0019	0.11	12.7	3.3	1	23	277	300	277	300	0.97
7	9	0.00037	0.021	15.0	1.9	1	23	306	328	306	328	0.99
8	9	4e-06	0.00023	21.1	0.8	1	23	333	355	333	355	0.98
9	9	0.00096	0.054	13.6	0.5	2	23	362	386	361	386	0.95

Sequence Information

Coding Sequence: ATGGACACCATCTGTAGACTCTGCTTTCAAACAGCAACGTTATTCCAAGTGCCCGGCTATAGCATACCCACGTGCGTACGCTGCTCCGAACAGCTGACAAACAATTCAAACTTCCATCAAGCAGTGCGGGGGGCAGAAGGCGGATCGGCTGTTTCCGTATCTGCGGCCGttgcagcagccgccgccgccgccgtcgcaTCGTCATCGACGTCCAGTGATAGCGACGTTGCTGCAGTGGCGCAGCAGCTGACCAACGGCAGTAATGCTGCTGCCGTCGCAGTGCTGCAGctacaccagcagcagcagcatcaacagcaacaacaaatgcaATCATCGAGCTCTTCCGAGAATCTACAATCGCAGGACGATTCTGAAGATGTGGATCTGATATTCAATGAGGAGGGGTCCTGTCCCCTTTGCAATAAGACGTTCTCGCGCAAATCCTCGCTGATGACGCACATACGGAACCACTCGGCGGAGCGTAAATTTGTTTGCACATACTGCAACAAAGGCTTCACCCAGGCGGCCAATCTGCGGAATCATGAACGTATCCACACGAACGATCGTCCGTACCAGTGCGTCGATTGTGGCAAGACCTTCACACAGATCACGAACCTAAATAATCATCGGCGCCTGCACACCGGCGAGCGGCCCTTTGTCTGCAATGAGCCCGAATGCGGGCGCAGCTTCGCCCAGGTGACCAACCTCAACAATCACATGAAGTCACACCACAAGGTGCAACAATACTGCTGCAACGTATGCAACAAGAAGTTCACTCAGGTCACCTCACTGAACCAGCACCTGCAGGCGCATGCCGGTGTCAGCGGCTACTTCTGTCCGCGTTGTCCCGATAAGAACTTTAAGCTGCAGTCACAGTTGCACACGCACATGAAATCGCACGGCCTGGCCTTCCCCTACGAGTGCAGCAAGTGCGACGAGAAGTTCCTGCAGCAGGCTCACCTCGACCAGCACCTGAAGATGCACGACGAGTTCAAGTTCAAGTGCGACATCTGTCCCAGCAGCTTCAACCAAGAGTCGCTGCTGAAGAAGCATGTGCAGCGGCATGTCGAGGGTCGGTATCTCAGTTGTCCAGTGGCCAACTGTACGGAATCGTTCGCCGTACGCCAGCACCTGTCCAAGCATTTGCTCACAAATCACTCCCATCACGAGCTACCGCCACCGAAGCGCTCCAAAAAGACGGTAACGCTGCAGTCGCCACAACAGCCACTGGCGATGATCGGCCAGCCGCTTTCTCTGCAGCACACGACGGGGCAGCGTGGACGACCGCCGAAAAATAAGAACAAAACGACCGGCACCTTGGCCGCCACGGCTATTAAGATTGAGATCAATGAGCCGCTACACAGCCAGCATATCATCAGCAGTGCCAGTGGGCTTTCCATCCAACAGCAGATCAACCAGCACATGCAACAGCAGGCGCAACAGCAGGctcagcagcaacatcagcaacagcagcagcatctacATCTGTCCATGGGCCAGGCGGTCAAGGCGCGGTTCATACCCACCAAGTAG
Protein Sequence: MDTICRLCFQTATLFQVPGYSIPTCVRCSEQLTNNSNFHQAVRGAEGGSAVSVSAAVAAAAAAAVASSSTSSDSDVAAVAQQLTNGSNAAAVAVLQLHQQQQHQQQQQMQSSSSSENLQSQDDSEDVDLIFNEEGSCPLCNKTFSRKSSLMTHIRNHSAERKFVCTYCNKGFTQAANLRNHERIHTNDRPYQCVDCGKTFTQITNLNNHRRLHTGERPFVCNEPECGRSFAQVTNLNNHMKSHHKVQQYCCNVCNKKFTQVTSLNQHLQAHAGVSGYFCPRCPDKNFKLQSQLHTHMKSHGLAFPYECSKCDEKFLQQAHLDQHLKMHDEFKFKCDICPSSFNQESLLKKHVQRHVEGRYLSCPVANCTESFAVRQHLSKHLLTNHSHHELPPPKRSKKTVTLQSPQQPLAMIGQPLSLQHTTGQRGRPPKNKNKTTGTLAATAIKIEINEPLHSQHIISSASGLSIQQQINQHMQQQAQQQAQQQHQQQQQHLHLSMGQAVKARFIPTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00533229;
90% Identity: iTF_00481000; iTF_00471790; iTF_00473951; iTF_00515042; iTF_00601205; iTF_00580910; iTF_00564083; iTF_00517880; iTF_00487438; iTF_00603508;
80% Identity: -