Basic Information

Insect: Drosophila peninsularis
Gene Symbol: -
Assembly: GCA_035047485.1
Location: JAWNPN010000057.1:2347830-2351858[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0097 0.64 10.6 0.3 2 23 35 56 34 56 0.96

2 12 0.25 17 6.1 9.4 1 23 62 85 62 85 0.98

3 12 0.00045 0.03 14.8 1.2 1 23 126 148 126 148 0.95

4 12 0.3 20 5.9 1.7 2 23 415 437 414 437 0.94

5 12 0.015 1 9.9 0.9 1 23 462 484 462 484 0.98

6 12 0.94 63 4.3 5.2 1 23 492 516 492 516 0.91

7 12 0.24 16 6.2 2.2 2 23 521 543 520 543 0.94

8 12 0.00032 0.021 15.2 0.2 2 21 556 575 555 576 0.93

9 12 0.24 16 6.2 1.0 1 23 584 606 584 606 0.97

10 12 9.7e-07 6.4e-05 23.2 2.8 1 23 612 635 612 635 0.98

11 12 3.9e-05 0.0026 18.1 1.4 1 23 641 663 641 663 0.98

12 12 0.00036 0.024 15.1 2.9 1 23 669 691 669 691 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0097	0.64	10.6	0.3	2	23	35	56	34	56	0.96
2	12	0.25	17	6.1	9.4	1	23	62	85	62	85	0.98
3	12	0.00045	0.03	14.8	1.2	1	23	126	148	126	148	0.95
4	12	0.3	20	5.9	1.7	2	23	415	437	414	437	0.94
5	12	0.015	1	9.9	0.9	1	23	462	484	462	484	0.98
6	12	0.94	63	4.3	5.2	1	23	492	516	492	516	0.91
7	12	0.24	16	6.2	2.2	2	23	521	543	520	543	0.94
8	12	0.00032	0.021	15.2	0.2	2	21	556	575	555	576	0.93
9	12	0.24	16	6.2	1.0	1	23	584	606	584	606	0.97
10	12	9.7e-07	6.4e-05	23.2	2.8	1	23	612	635	612	635	0.98
11	12	3.9e-05	0.0026	18.1	1.4	1	23	641	663	641	663	0.98
12	12	0.00036	0.024	15.1	2.9	1	23	669	691	669	691	0.95

Sequence Information

Coding Sequence: ATGGTTAGCAATGAGCGTGTGCGTGATATACATGCAGCTCAATCGTTGAATGCTGGTCAGAAAATGCTTGTGGAAATAACAACGGACGGCATTCCGAAGCTCCACTGTCCAGTCTGCAATAAGGCGTTAATTTCGCTCGCCGGCTATGTGAAGCATGTGAAGAAGCATGAGCCGCCGGGTGGGTTTCGGTGTCGCTATTGCGCGCATACATGCTGCCATGAGGAGCAGCTGAAGGAGCACTTGAGGATCACACATAGCGCCTATATCGAATGTCGCCTGTGCCATAGCCTGTTCGGCAGCGAGGCGGAGCACGAGGCACACATCGAGGAAGTGCATCAGGAGCGCAAATTCAATGTGAGCCAGGATCAGCAGCTCTTCAAGTGTGAGCTGTGCGGCAAGTGCTTTGCGGATCGCGAGAGCAGCGCGAAGCATCAAGCCGAGCACGAGGAGAACTGCAAAGGGAGCTCGTCCAGCCCGGCCAAGCAGCAACGAAACTGTCGACAAGCTCCCATTCCGGCGGATGGACCTGCCCACGTAGTCAAGCGAAAGCGGGGCAGGCCAAAGAAATGCCCAGCGCCAGCTTCAGAGGACAGCGACGACGATGTGCCCCTAGCCAGCCGGCTGAAAGTTCAAACACCTATTAAGCTAAAACAGGAGTTCGTTAGCAGCCAGGAGCTAAGCGATACGGACGAGGAGTATCCCGACTTTGAGCCCAACAACAGCGACGAGGAAGCGGATGCGACTCAGTTTAAGCTACCTCCTCCGGCTCTCGTCAAAGAGGAAGCCATCGATCCCGACTTTGAGTATCAGGATGCAAGCGCCTTTGTGAAAATGGAGGGTAGCAATGGGTTGGACATCTACAGTAATGAGAAGGACAAGCTACTGGATGTGCTGCTCAGCCAGGATGAGAGTATGAAGCCCTACGAGCATTTAAAAGTGGAGCACGCAACGGGCATATTGGATGAGATAGCCGCCGTACCCATGGCCAAGCAGAATGGGGAGGACCACATGGAGGAGGATGTGCTGGCATTGCGTGAGACAGAGCCGGACAGCGAGGAGGAGGCCCAATTGCGTCCACTAACCAAATCCAGTGTAAAGCGCAAATACCGAAAGCGAGGAGCAGCTACCACCTCGCCTGTAACCCAGGAAGAGGTAACAACTGCTCCACGCCGCGTGGCCAAGATAACCAAAAAGGAGTTGAAGGAGCGTCTGAAAATGCTGAGTAAAATGGAAAAGACCTGGCAGTGTCCACACTGTGTGAAAATCTACCACATTCGCAAGCCGTACGAGAAGCATCTGCGCGACGACCATAAGCTAAGCGAACAGGCGGTCAAGGAGCTCTTCAAGGATGCGGATGCACATGCCAAACTGGACGAAGAAGTCTTCAAGTGTAAGATCTGCAGCAAAATCTACTTGGTAGAGAAACGCCTGGAGACCCACATGAAGGTGCACGGCAAGGATGGCAGTCTAATACACAAATGCCCCTGCTATTGCAATCTGTTCTTCGCCAGCAAAGAGCTAGCCACCCAGCATGCCCATCAGCAGCACAAGGAGCTGCTCTACTGCGAGAAGTGTGACAAGTATATGACGGGGCATGACAGCTTGAAGAACCACGAGAAGAACTATCATGCCCGCAAGGAGCCGCGCAATCTGCCCCGGAATCTGATTTGCGACAAGTGTGGCAAGAAATTCACAGGTCGCACTTCTCTCTCGGATCACGTGCGCTCCGAATGTGGCCGAGTGCCTCTATACGAGTGCAGCGTCTGCTGCAAGCGACTCTCCACAGCCGGAATTCTAAAAACGCACATGCTTCTGCATCAGTCGGAGACGCCGTATCAGTGCGACAAGTGCGGGAAGACGTTCAAGGTGAAGGCGCAGTACAAATCGCATTTGAAGACCCGTCACACGGACAACAAGCCCTACAAGTGCCATCTCTGTCCCAAGGAGTACCCATATCGGGAAAGCCTTTTGACCCATATGACTGTTCACACGGGCATCAAACGCTTTCTGTGCAACAACTGTGGCAAACGGTTCACATGCATCTCCAATCTGCAGGCGCATCGAAAGGTGCACGCCGACACCTGCGGCCAGCTGCCCCTCAATGCGAAAGCCACGCAATATATGGGCGTGCAGCGAGGAAAACTGCTAATGGGCGCTAAGCCAGAGGCGGGCATGGAATACGAGGAGACAAAAACTCTAATTGCCCAGGATGTGATCGATCGGGATATGCCAATGGCGCAGGAGCTCAACTTTCCATCCGATGGCAGCGCGCCGCTGGCAACGGTTCCACTCAATTACGCTTCCTCGCACCTGGTGCCGCACATTGTGCTGCAGACGATGCAGGCTGAAGCGAGGACACAGGATTAG
Protein Sequence: MVSNERVRDIHAAQSLNAGQKMLVEITTDGIPKLHCPVCNKALISLAGYVKHVKKHEPPGGFRCRYCAHTCCHEEQLKEHLRITHSAYIECRLCHSLFGSEAEHEAHIEEVHQERKFNVSQDQQLFKCELCGKCFADRESSAKHQAEHEENCKGSSSSPAKQQRNCRQAPIPADGPAHVVKRKRGRPKKCPAPASEDSDDDVPLASRLKVQTPIKLKQEFVSSQELSDTDEEYPDFEPNNSDEEADATQFKLPPPALVKEEAIDPDFEYQDASAFVKMEGSNGLDIYSNEKDKLLDVLLSQDESMKPYEHLKVEHATGILDEIAAVPMAKQNGEDHMEEDVLALRETEPDSEEEAQLRPLTKSSVKRKYRKRGAATTSPVTQEEVTTAPRRVAKITKKELKERLKMLSKMEKTWQCPHCVKIYHIRKPYEKHLRDDHKLSEQAVKELFKDADAHAKLDEEVFKCKICSKIYLVEKRLETHMKVHGKDGSLIHKCPCYCNLFFASKELATQHAHQQHKELLYCEKCDKYMTGHDSLKNHEKNYHARKEPRNLPRNLICDKCGKKFTGRTSLSDHVRSECGRVPLYECSVCCKRLSTAGILKTHMLLHQSETPYQCDKCGKTFKVKAQYKSHLKTRHTDNKPYKCHLCPKEYPYRESLLTHMTVHTGIKRFLCNNCGKRFTCISNLQAHRKVHADTCGQLPLNAKATQYMGVQRGKLLMGAKPEAGMEYEETKTLIAQDVIDRDMPMAQELNFPSDGSAPLATVPLNYASSHLVPHIVLQTMQAEARTQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00506346;
90% Identity: iTF_00532638;
80% Identity: -