Basic Information

Gene Symbol
dl
Assembly
GCA_035047485.1
Location
JAWNPN010000029.1:472615-475813[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.4 6.3e+03 -3.1 5.9 96 128 25 57 14 67 0.52
2 4 2.7e-74 1.2e-70 236.9 0.0 1 169 72 242 72 242 0.99
3 4 1.4 6.3e+03 -3.1 0.0 60 77 479 497 459 507 0.72
4 4 2.2 9.8e+03 -3.7 0.5 118 136 640 658 632 673 0.55

Sequence Information

Coding Sequence
ATGTttccaaatcaaaataatttggGCGCTGCGGGTGCAGCAGGCGacgcccagcagcagagccTCAACTACAATGgcctacagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaacagcaacagcagcaacagcaacaattgtcaCAGTCCGCTAAGAATGTGCGAAAGAAACCGTACGTGAAGATAACGGAGCAGCCCGCCGGAAAAGCGTTGCGTTTTCGGTACGAGTGCGAGGGCCGCTCGGCTGGCTCGATACCCGGCGTAAATTCGACGCCCGAGAACAAGACCTACCCGACCATCGAGATTGTCGGCTACAAGGGACGCGCCGTAGTCGTTGTGTCCTGCGTCACCAAGGATACGCCATATCGTCCACATCCGCACAATCTGGTAGGGAAGGAGGGCTGCAAGAAGGGCGTCTGCACGCTGGAGATCAGCAGCGAGACGATGCGGGCCGTCTTCAGCAACCTGGGCATTCAGTGCGTCAAGAAGAAGGATATTGAGGCGGCGCTAAAGGCGCGCGAAGAGATTCGCGTGGATCCATTCAAGACTGGATTCTCGCATCGCTTTCAGCCCTCGAGCATTGACCTGAACTCGGTGCGTTTGTGCTTTCAAGTATTCATGGAGAGCGAGCAGAAGGGCCGCTTCACCTCGCCTCTGCCACCCGTCGTCTCCGAGCCGATCTTCGACAAGAAGGCCATGTCCGATCTGGTCATCTGCCGGCTGTGCAGCTGCTCGGCCACAGTGCTGGGCAACACGCAGATCATTCTGCTGTGCGAGAAGGTGGCCAAGGAGGACATCACGGTGCGCTTCTTCGAGGAGAAGAACGGACAGACGATGTGGGAGGCTTTAGGGGACTTTCAGCACACGGACGTGCACAAGCAGACTGCCATTACGTTTAAGACGCCGCGATATCACACGCTTGAAATAACGGAGCCCGCCAAGGTTTTCATACAGCTGCGTCGACCCTCGGATGGCGTTACCAGCGAGGCTTTGCCCTTCGAGTACGTGCCATTGGATTCAGGTAGGCATACGTTCTGGAATCTTCATCGGCACCTCAAGCGGAAGCCCGATGAAGACATCTTTCAGCAAATCCTAGCGATCGACGCGGTCGATCGCTGCTCGGCCAAGCGCGAGCCTCCGACGATTGAGGTAATTGATTTGAATACGCCCACCGTGGAGCAGGCGGAGCCTCAGCTACTGCAGCTGGCCGTAGCGGAGGCGGAGACAGCTGCCTCCTTAGCCGAGGATGTGACAGACCAGGCGCCATTGGATATGGAAGCAGCCGACGCGGAGGCCGAGGCGGAGCGACTGCGAACTGAACAGGAAATCGATACGATTATAGATGAGAAGGTGCGTGAgttggagcagctggagctggagcagcagcagctggagcagcaacagttggcgGCGCCGGAGCCGCATCAGCTGACGGCCAATGACAAATGCAACGAATGGATGAAGTCcaatgagctgctgcagcagccccaCGAGCCGAGCCCCGATCCAGTCGACGCCGAGGTCGAGGCCGATGACAGCGATGCCACGGCCGAGACCCAGGTGGCCGCCACGGACGAGGACAAGACGCTCAACGAGCTGCTCGAGCAGGTGGCCGAGCTGGACGAGATCTACACGGACTTTGTCGTGCAGCGGGACACCTACAACAACACGCTGCAGAACGAGCTGCAGAGCATGGAGCGGCCGCCCCTGCAGGTGGAGGACAGCTTCGACGATGCTGCCACCTACACGAGTCTGCAGATCGCCTTCAAGAATCCAATCAGCATACCCATGGATGACATAATGCCCCCCACGCCGCCCATGTCCCAATGTGCGCCTGAAGATGCGCCGCACTACGATGCTGTCGAGGTCAactcgcagcagcagaagcagcagcaccagcagcagcagcatcaagaGCTGATCAAGGAGTACGAGATGGAGAAGCGCGCACAGGCGCAGCTTGAGCTGGAGGCTGCTCTGATGTGTGCGGCGGTCGAGGAGGagaagctgccgccgctgccgcccaaGCGCCTGCGCAAGCAGGACAGCAATGCTGAGAATCGGTCCATCGAGGCGAACAGCGATGCCGCAGGCTCAAAGCCACGCCTACCGCCTCCCATCATACACCCACGCGTCGTCGATCTGCCCGCAGCGCCGACCAAGAAGCTGCCACAGCCCCCGGAGccaaagcccaagcccaagccgaaGCCCACGACGAATCCGAACTTCAACACGCTGCCCAGGCAGAAGAAGCCCGGCTTCTTCTCCAAGCTGTTCGCGCGGCGCAAGAGCAAGCCCGAGCTGATGGATCGCAGCAACGAGAACTGCTCGAGGCTCAGCTCGAAGCCGGCCAGCGCCACGGCCAGCAGTGCGCCCAGCCTGGACAATCTCAGCACTCGCACGGGCAAGAGCAGAGGCACCAATGTGGTCCTGGGAGCACTGAAGCCAGACGGCTCAGGAGCCACGGCCACGCCTCGGAAAGTAGGCAAATCAGGCAAGCCCTGCGGTCGCAGCGTGAGCAGCGTCTCGGGCAAGCGGCCCTCGTATCTGAATGCGGACGTGGTGCATATTCCACTCAAGGGCGACAGCTCCAGCAGCCTGCAGCAGTCGCCCAACGAGGCCTACTCGAGTGCCAGCACGATTACGGTGGGCGGGCAGCTGGACAGACGCACTGCGTCCGCACTGCAGCTGGCCGAGATACCCATCAGCGAGGGCGGCATGGAGCTGGTGGCCATCGCCGATCGCCAGAGCCTGCACAATTTGGTCAGCTCGATCGAGGCGCATTTCAATGTCAAGATGGACCCCAATCTCGATCTCACGGAGGTCGAGCACTTTGCCCTCTACACGAGCGTGCCGCCCCAAGCGACGGCCAGTGAGTTCGACGAGACCTCCGCCTACTACGCATCCGTGGACGCAGGCGAGATCCTGACGCCCGACCAGGTGGCCAAGCGGCTGGCGGCAGCAAACGGCAATTGA
Protein Sequence
MFPNQNNLGAAGAAGDAQQQSLNYNGLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLSQSAKNVRKKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVVVVSCVTKDTPYRPHPHNLVGKEGCKKGVCTLEISSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFSHRFQPSSIDLNSVRLCFQVFMESEQKGRFTSPLPPVVSEPIFDKKAMSDLVICRLCSCSATVLGNTQIILLCEKVAKEDITVRFFEEKNGQTMWEALGDFQHTDVHKQTAITFKTPRYHTLEITEPAKVFIQLRRPSDGVTSEALPFEYVPLDSGRHTFWNLHRHLKRKPDEDIFQQILAIDAVDRCSAKREPPTIEVIDLNTPTVEQAEPQLLQLAVAEAETAASLAEDVTDQAPLDMEAADAEAEAERLRTEQEIDTIIDEKVRELEQLELEQQQLEQQQLAAPEPHQLTANDKCNEWMKSNELLQQPHEPSPDPVDAEVEADDSDATAETQVAATDEDKTLNELLEQVAELDEIYTDFVVQRDTYNNTLQNELQSMERPPLQVEDSFDDAATYTSLQIAFKNPISIPMDDIMPPTPPMSQCAPEDAPHYDAVEVNSQQQKQQHQQQQHQELIKEYEMEKRAQAQLELEAALMCAAVEEEKLPPLPPKRLRKQDSNAENRSIEANSDAAGSKPRLPPPIIHPRVVDLPAAPTKKLPQPPEPKPKPKPKPTTNPNFNTLPRQKKPGFFSKLFARRKSKPELMDRSNENCSRLSSKPASATASSAPSLDNLSTRTGKSRGTNVVLGALKPDGSGATATPRKVGKSGKPCGRSVSSVSGKRPSYLNADVVHIPLKGDSSSSLQQSPNEAYSSASTITVGGQLDRRTASALQLAEIPISEGGMELVAIADRQSLHNLVSSIEAHFNVKMDPNLDLTEVEHFALYTSVPPQATASEFDETSAYYASVDAGEILTPDQVAKRLAAANGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530040;
90% Identity
iTF_00476393;
80% Identity
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