Basic Information

Insect: Drosophila pegasa
Gene Symbol: -
Assembly: GCA_035046225.1
Location: JAWNOD010000494.1:3923276-3927163[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00043 0.026 14.8 0.1 1 23 161 184 161 184 0.96

2 14 0.00021 0.013 15.8 2.3 2 23 233 255 232 255 0.97

3 14 0.013 0.8 10.2 0.9 1 23 357 380 357 380 0.93

4 14 3.6 2.2e+02 2.5 4.5 2 23 429 451 428 452 0.95

5 14 0.0034 0.21 12.0 0.5 1 23 515 538 515 538 0.88

6 14 7.8 4.8e+02 1.4 0.0 2 13 557 568 556 573 0.81

7 14 0.00072 0.044 14.1 3.3 2 23 589 611 589 611 0.96

8 14 0.0024 0.15 12.5 0.1 1 23 710 733 710 733 0.95

9 14 8.7e-05 0.0054 17.0 0.3 1 23 785 808 785 808 0.93

10 14 0.0012 0.074 13.4 2.2 2 23 858 880 857 880 0.97

11 14 0.0013 0.079 13.3 1.4 1 23 968 991 968 991 0.92

12 14 0.14 8.8 6.9 1.5 1 21 1043 1063 1043 1064 0.95

13 14 0.57 35 5.0 0.1 2 23 1107 1131 1106 1131 0.84

14 14 5.6 3.4e+02 1.9 0.3 1 13 1149 1161 1149 1173 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00043	0.026	14.8	0.1	1	23	161	184	161	184	0.96
2	14	0.00021	0.013	15.8	2.3	2	23	233	255	232	255	0.97
3	14	0.013	0.8	10.2	0.9	1	23	357	380	357	380	0.93
4	14	3.6	2.2e+02	2.5	4.5	2	23	429	451	428	452	0.95
5	14	0.0034	0.21	12.0	0.5	1	23	515	538	515	538	0.88
6	14	7.8	4.8e+02	1.4	0.0	2	13	557	568	556	573	0.81
7	14	0.00072	0.044	14.1	3.3	2	23	589	611	589	611	0.96
8	14	0.0024	0.15	12.5	0.1	1	23	710	733	710	733	0.95
9	14	8.7e-05	0.0054	17.0	0.3	1	23	785	808	785	808	0.93
10	14	0.0012	0.074	13.4	2.2	2	23	858	880	857	880	0.97
11	14	0.0013	0.079	13.3	1.4	1	23	968	991	968	991	0.92
12	14	0.14	8.8	6.9	1.5	1	21	1043	1063	1043	1064	0.95
13	14	0.57	35	5.0	0.1	2	23	1107	1131	1106	1131	0.84
14	14	5.6	3.4e+02	1.9	0.3	1	13	1149	1161	1149	1173	0.76

Sequence Information

Coding Sequence: ATGGAAGGTATGGATCTGTGGACGTCAATGTTTTCAGCCGATTTCGATGAAGGTGATGGTGAGGTGGGGAGCCATAATAATGGCAATAACGCGCTCGCAGACGAGTTTATGggcgaagaggaggaggaggagcaggaggctGAAGAGGATGAGGGCTCGGCCGACGACAGTGGCAGCAAGCGAAAAGGACACGAGCCCGATGACGATGCCATATTTGACTTTGAGCTAGAGCCTATTGTTAGCATTGCGGAACCAGAACTGGAGCCGTTACCTAGACCAACGGCGACTCCGCTCCAGCCTCCAATGCCAACGGGCCCAGCCCTCCGACCCCAGCACCGCCAATCGCTGCCAGCTTCGTTTGGCTCCTATCAGTCGATGGGTCGAGGCGGTGCAGGCATAGCGTCCACACGGCCTACGACCTCACAGATCAATGCCACCGATGAGAACGGTGTGCCCATCAATTACGAACTGGGCGTTACCTATATATGCCCCGCCTGCGGCGCAGAGTATCGGCAGCAGGACATGTGGAAGCGTCACATGAACCAGATGCATCAGTACAATACGCGACGTGGTCTCAACTTCGTGGCCATTGACAAGCTGTATCACCGGTGCCTGGAGTGCAACAAGCGGATCGCGATGCACAGCCGGGAGAATTTGCTGAAGCACAAGTTCACCCATTTGCCATTTCGGTGCACCAAGTGCCATATATGCAAGCGCGAGTACAAATACAGGCAGGACCTGATGGTACATCTGCGCATGGTGCACTGCGACGAGGTGGTGGCCATGATGCGTGGTGGCAAATTAAGTGCCGGGCGCAAGACGCGTGTTCGCGAGCCGCGCATCGAGCAGAACCGCGATCATTTCGGgcatgacgatgacgatggcATAGAGGTTAAGAATGAGCTGATGGAAGCGGAGAGCAGTGCCCAGCCAGCTGAAGAGTCCAATCAAGACTTGGATGATGAGCACAGTCACAGTTCCAATCAAGCGGTTAACAAAAAACGTAGCACTggcaatggaaatgggaaCAGCAGTAGTTCAACGGATTTTTGCGAGgactatatacactatatgtGCCCTGACTGTGGAACCGATTGTGATACCCACGCCCAGTGGAGTCAGCATATTGAGTTTGTGCACGATTACGTCAGTCGTAGGGGCCTGAACTTTCGTTGCGTGgatatgcaaatgcagtgcCTCGAGTGCAAGCTGTTTGTCATTCCGAACACCATCAAGACGCTGCGCGCACACAAGTTTAGCCACTTGCCTCAGCCGGAGTGGATGCGGTGCAAACTGTGCTACCAGGGCTTTACGGAGCATCATGAAATACTGGCGCATCTTCTGAAGCAGCATCATTTGGAAACCTTAATACctgagaaggaggaggaggaacagCAACCATTGGCTGCATCCAGCGTGGTTGATGAGTATGAGGATAATCCCGGCATAGGCTGCGATGATGAAGCTTCATTGCACTGGGACGACGTGCCTCGTCGTGGTGGTCGTATTGGCAGTGATGATATGTACGAGCCGCATATTGATTACCTGTGTCCGCAGTGCGGCAGGGAGTTCATAGAGAAGAAGCATTGGCGCACGCATGTCGTCCAAGTGCACGGCATGAATGATCTGACCAAGTTGAATTTCGAGGTGATCAACGATCGCCAGTTGAAGTGCACGGAATGCGAAAAGATAATAACGAATGCCTATGGCATACAGAATGCCCAGCAACACAGGATCACACATCTGCCCTACAAAGCGTACGCTAGATGCCGCAAATGCCATAAATCCTATACGGATCGCAAGGGTCTTGTCAAGCATTTGGCTACTTACCATCGCGTGGGCTATGAGCCGCGTAAGGCGATTGGAACAGCAGCTCCTACTTTGACGCCAACTAAGTCACAGACGCCGCGCAAGCAAATTGTCACCGTGGCCAACGAGACCTATGAGATTATCTATTTGGATGAGGAGCAATCGCCGCCTacgaataataatatcaatgaAGAGAACGATTTTGGCGAGCAAATGCAAGCGGACGATGATGACTATGCCATAGGCAGCGCCAGTGGCATAATGGGACGCCAGTCGCAAGCCTCCAACACTGCTGCCCCCAATCCTAATCCGAATCGCTATAAATGCGTAGATTGCGGCTCTCTGTTTGCCACGCAGATAGCACTAAAGACGCACATCAGCGAGGAGCATGATTTCATGGACACGCAATACAGTGCGAAAAAGTTTGACAATGCGGAGCCAGCGGAGGAGCCAGCTTTGGTGCCTGTTGCCGTAACAACCGCTGCAGGCAGTACGCCTGCGAAGAACCCCTCAGGTGCCTCCACCATAGAGCAGAACTATATATTCCTGTGCCCGTCGTGCGGCAAGGCCTATAAGACGCAGTTCGAGTGGCGGCGCCACATCAACGAAGAGCACAATTTCGACAAGCGgcagtatttaaatatgcgcCAGCTGGACAAATATCGCTATCAGTGCACCCTATGCAAGGATATTGTGTGTAACTCGAAGCTGAAAGGCCTGCAGGATCATCACTTTCGACATTTGCCTTACCGGCTATATCTGAAGTGCCTGGTGTGCGGCACCTGCTACAATCACAAGCCCAACATAGCAGCGCATCTGCGCACACGACACAACATATACGAGCGCGAGTCCTCATCTTGGCGCGATCAGCTGCAAAAGAACCAAAATGGTCACGAGCAGCCCAAGTATAAGGATAAGGACAGCGATACACAAGTCACTGTTGCCACCACCGGCAGTTCTTCTTCACCCACGCCGGGCAGTAGTCGCACGCTCAAGCCGCAGCCGGGTGTGCTGCCCACGCGACCCGCTGGACTCAACACGTTGGAGGATAGTATATCGTATCACAATGCCGTAGACCTGGACTTCATTACCTATTACTGTCCCAAGTGCAATAAGAACTTTGACTCGCACGCCTTTTGGCGCAAACACATTGTGGAGGTGCACAACTATAATAGTCGGCAAGGGCTGAACTTTCGCCAGATTGACAACCATCACTATCTGTGCCTGGAATGCTACAAGCGTGTGACAGTGACGCACACTAAGGGCGCCATCGGGCAGCTACAATCGCACAAGTTCCGGCATTTGCCGTATCGCTCCTTCAAGTGCTTGACCTGCAGCGGGGAGTTTGTGcgtaaacaaatgtttttcaagCACTTGAACCGCGACACCAATCGTTGCGACAACAAGCCATTAAGTGGCCAGGAGAATGATGAGGACACAACGGATCAGCCAGACAGGCCAGCTACCACGCCTGGCAAGGAGACAGTTGATACCGCAGCGTATCGCTTGATGTGTCCACAGTGCGGCGATGACTTTACCACCAGCAGCAAAGCTCTGTGGCGAGAGCACATTAACATTGATCATAGTCTAGGGAAGCGGGAGATGCTGCACATGCGCAAGCTGGGCGACGAGCTCTATCGCTGCACCGACTGTGAGGAGCAGCTGGAAACGAAGCATCTGCGAGTGCTGCAGGAGCATCGCTTCCAGCATTTGCCCTATGCCGCGTATATACGCTGCCAGCTATGTGAACAGCCGTCGGCGGATGGAGTGGGTCATGGTGCAGCGGCTGCCGGTTTCCATAGTATGCGCGAACTGCAGGAGCACATACGCAACGAACACCCGGATGTGGTTGAGCAGGATGAGCAAATGCAAGCATTAGTCgacgatgaggaggaggataGTCAGCAGCCGACGGCTAGCAATGAAGCGGCAGACAGTAATCTATatatgccgctgccgccgcattTGCTGGACGATGATGTGGAGGACATGGAGTTCGAGGAACAGTATCTGCTAGGCTAA
Protein Sequence: MEGMDLWTSMFSADFDEGDGEVGSHNNGNNALADEFMGEEEEEEQEAEEDEGSADDSGSKRKGHEPDDDAIFDFELEPIVSIAEPELEPLPRPTATPLQPPMPTGPALRPQHRQSLPASFGSYQSMGRGGAGIASTRPTTSQINATDENGVPINYELGVTYICPACGAEYRQQDMWKRHMNQMHQYNTRRGLNFVAIDKLYHRCLECNKRIAMHSRENLLKHKFTHLPFRCTKCHICKREYKYRQDLMVHLRMVHCDEVVAMMRGGKLSAGRKTRVREPRIEQNRDHFGHDDDDGIEVKNELMEAESSAQPAEESNQDLDDEHSHSSNQAVNKKRSTGNGNGNSSSSTDFCEDYIHYMCPDCGTDCDTHAQWSQHIEFVHDYVSRRGLNFRCVDMQMQCLECKLFVIPNTIKTLRAHKFSHLPQPEWMRCKLCYQGFTEHHEILAHLLKQHHLETLIPEKEEEEQQPLAASSVVDEYEDNPGIGCDDEASLHWDDVPRRGGRIGSDDMYEPHIDYLCPQCGREFIEKKHWRTHVVQVHGMNDLTKLNFEVINDRQLKCTECEKIITNAYGIQNAQQHRITHLPYKAYARCRKCHKSYTDRKGLVKHLATYHRVGYEPRKAIGTAAPTLTPTKSQTPRKQIVTVANETYEIIYLDEEQSPPTNNNINEENDFGEQMQADDDDYAIGSASGIMGRQSQASNTAAPNPNPNRYKCVDCGSLFATQIALKTHISEEHDFMDTQYSAKKFDNAEPAEEPALVPVAVTTAAGSTPAKNPSGASTIEQNYIFLCPSCGKAYKTQFEWRRHINEEHNFDKRQYLNMRQLDKYRYQCTLCKDIVCNSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRTRHNIYERESSSWRDQLQKNQNGHEQPKYKDKDSDTQVTVATTGSSSSPTPGSSRTLKPQPGVLPTRPAGLNTLEDSISYHNAVDLDFITYYCPKCNKNFDSHAFWRKHIVEVHNYNSRQGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCSGEFVRKQMFFKHLNRDTNRCDNKPLSGQENDEDTTDQPDRPATTPGKETVDTAAYRLMCPQCGDDFTTSSKALWREHINIDHSLGKREMLHMRKLGDELYRCTDCEEQLETKHLRVLQEHRFQHLPYAAYIRCQLCEQPSADGVGHGAAAAGFHSMRELQEHIRNEHPDVVEQDEQMQALVDDEEEDSQQPTASNEAADSNLYMPLPPHLLDDDVEDMEFEEQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00532646;
90% Identity: -
80% Identity: -