Dpeg000105.1
Basic Information
- Insect
- Drosophila pegasa
- Gene Symbol
- -
- Assembly
- GCA_035046225.1
- Location
- JAWNOD010000059.1:66338-71592[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.001 0.063 13.6 0.5 1 23 146 168 146 168 0.98 2 14 0.00014 0.0085 16.4 1.3 1 23 390 412 390 412 0.98 3 14 1.6 1e+02 3.6 0.8 1 23 418 441 418 441 0.94 4 14 0.85 52 4.5 0.2 1 23 468 491 468 491 0.92 5 14 0.0012 0.074 13.4 1.9 3 23 758 778 757 778 0.92 6 14 0.048 3 8.4 1.4 1 23 784 807 784 807 0.98 7 14 1.5 95 3.6 1.1 2 23 844 865 843 866 0.90 8 14 0.0084 0.52 10.8 0.8 1 23 887 910 887 910 0.97 9 14 0.051 3.1 8.3 1.7 1 21 1129 1149 1129 1152 0.89 10 14 0.0003 0.018 15.3 4.2 1 23 1165 1187 1165 1187 0.98 11 14 0.00012 0.0072 16.6 0.6 2 23 1193 1215 1192 1215 0.96 12 14 0.0013 0.08 13.3 4.2 2 23 1224 1248 1223 1248 0.90 13 14 0.046 2.9 8.4 0.6 1 23 1253 1275 1253 1275 0.97 14 14 0.0064 0.4 11.1 1.3 1 23 1281 1304 1281 1304 0.96
Sequence Information
- Coding Sequence
- ATGGCCCACAAGCGAGTGAAAACACAGGACATGGCAGCGAACTATAAATTTTCGTGTCGCTGCTGCCTCAAATCCGAGGCGGAATTCTACAAACTGGACTCGCTCATCGAGTGCGGCAACGGTGAAAGTGACGCGACTCCTACAAAAATACCCCTACTACGTTTGCTACTATTCTGCATGCGCATCGAAAATCAGCCCGAGCTGCCGCAATACATATGCGTGGAGTGCAGTAAAAGTCTGCAAATCGCATACTATTTCATAAAGAATGGGCTGCGAGCTCATGAAATACTCTGTCGTAATCTGTGCCCTGGCAAACTGAAGAATCCAGGGCGCTTTAATGGCCAACAGTCAGCGCAGTGGCTCGAGTCGAATGAGAGTGAGGAGGCGACGCAGGCCAGGCACTGGGAGCCCAAGTCACAGAAGCCTGGGGTGCGACACGAATGCAAAGTGTGTGGTGCCATTATATACAATCGAATGGAACTGAAGCAGCACATACGCATGCACGCAGATGCATCGAAACATCAGTGCAAATTGTGCAGCTTTGTCACATTTAAGCATCGCCAGATGCCGGAGCATTATCGCAAAGTGCACGGCCTGACGGCTGCCCAAGTCGAGCATCAGCTTAAGATCCGAAAATCCATGCAGGCATCTGCGAACGCAATAACAGCACCGAGGAAAGTACCAATAGGTGACGATGAGCAAGTGAAGGTTTGCACTCTGGAGGATATGGAACTTCTGATACCCACTGTGCTGACACCAGAAGATTTTTCGCAGCCTCAATTTGATGCGGATCAGCTGCGTGATATAGAGCAGCAATTGGCGAGTTCGTTGCCCATCACACAGTccaacagccagccagcagatCCAGCGATAGGGGCTGCCAATGGCGCCAATGTTAGCATAGGTGCCGAGTTCTTGGTCATGCCTGATGGCTCCTTGCAGCAAGTGAATGATGCCGGTGTGGTATTCGAATATATTGACGATAGCAAAAACACCAATGCGACAAGTAATATGACATTGCAGAGTCTATTGGATGACTCCAAGGACGATTTAACATATAGTGCAATGGACATCGATTTAAGTCATATGGTTGTCGATCAAGCATTGCCACAGATAACAGTTAAGCCAAAGCCGCGCCCAGCACAGGCGTCCTCTGGCGCCCTGAAACATAAATGCAAACTGTGTCCAAAAGCGTTTCCCACTGTGGCACGTCTGAAATCTCATCAATTAACACATAGTCATTTGCCGAAATTCTATTGCGATCAGTGCTCATATTATTCGTTACGCAGCGCCGATCTCATCCAGCATTATACGACGGAGCACAAATCCTGCGTTAGCGAGAGTCGTTTTAATAACTTGGATAAATCCCAATTTATTGTACCGGCGGATAGAAGTCGCATTTACTCCTGCGATATGTGTTTGTTCGAAGCGCCCACCAGCGGACAATTGCGTGTACACTACAGCGATAAACATCTGATTGTGCCCAGTGACGTGCAACTGCGGCCCAGTTGGACGCATGAACCAAAGCAGAGGAATGCTAATGCAATGTCAAGCAGTGGTAATTCCAGTCAGCCCGATATTCCAGTGGGCATCAAATATCCTCCTATTACGTCGACGGCAACAGCTGAAGCAACTTCAGCATCAACTGCGGTGGCGCAGCCGTCCCTGgcatcaacaacatcagcgGGGGTGACGCCTATGAATGATATGAATGTTGTGGTGGATACCACATCATTGTTCTACGCAGCGACTGCAGAGCAGTTACCAAATACTAATGCTGCAACATCAGTAACAACGGCAGCTACAGattcaaatacatttgcaATATTTCCCGAGCAATCTTTTGCCAACAGTTTAACAACACCAACAGAAACCCCGACTACAATTTCAGTAGACACAAGTAGTGTGGCATCAACGACAGCAGTCAACCAACCAAACACAAGCATATTTGGTGATATGCAGGATTTTATAGATAATACCGATGTCGCTGCCATTTGTACCATACCCGCTGATGATATGCCTGTCGTTGATGGAGATGATATTGTTattgacaataataatattagctTAGATTTTGACGCGGAAAATCTATTTGAGGACTTCGATGATGTCGAGGTTGGCGAAgaggacgacgatgatgaagaTGCCGAAAATGaggatgaaaatgaaaataacgaTGCGGCTGCCGATCAAAATTTGCTACTCACCAGTGACGATGACGATGTGGATGACTTTGATGATGAACAGTCGAAGCATTTGCAGAAACCGTATTGCATCTATTGCAATAAAAAGTTCACCAGCCAATATAAGTTTGAGAATCACATGTTTGTGCATCGCGGTTTGGCGCCGTATCGCTGTGAGCTGTGCACAAATCTGTACAATATGAAACGTCTGCTCATTCGCCATTATAAGACGGTGCACAAGCGTATGCCCACTCGCGATATGGTTCAGGCCAAGGGCGACAAGGTGTCTGTGGCCCGTACAACCATTGAaaagataaatgtatatgttgACAAAGATCCCACGCTAATGTGTGCAAAATGTCCATTTGAATGCGAGGTGGAGGGTGAAATGCgaaagcatttaaatgcacATCATGGCATTAACGATGgtgGCTCGACTCATGCTAACGAGGTGTTTATCATACGCAAGCTGCCCTATGACTGTCCACGCTGTATTCGGTCCTTTGCGGCTAAACGTACGCTTACACGGCATTTGCAACGTAGCCATTTAGTGGATACAATTATTGAGATGCAGGCGCCTCAATTGTCAACTAGCTCAGCGGCCACCACAACCACATCGACGGCAACAACCACATTGCCGTTGAATGCCAGTGACGGCAACaaaacaaccacaacaacatcCGGAGCATCAACTGAACTGGATTCTAACGTATTGACGCAGCATTTCGCTGACTCTGTCGATGTCGATGGTGaaggcgatggcgatggcggtGGCAATGGAAAATGCGACAGGGACACAGGATGTACGGCGGAAAATGTAAGCACAGATATACACACCGAAGCACCACAACAGACAAAcgatgcagcaacaactgaacCTACGGAAGCTGCACCAAATGCAAACACTGAAGCCACAGAAGCTGAAATACCAACAATAAAACCAACAACGGAAGAaggaccaacaacaacaacaactacatcaACCGCTGGCTCAACACTCTTTCCAACGCCCACGCCATTTGACTTTGATCTAGATTTTATGGGCAACGGTGAACATGCCGCAACCCACAAAATCAACGACAACTACAATATTGCACCGAACCCCAGTCATCTATTAAATGGATCCGATAAGCTTCTGACCGCTGCGTTGGAGCCATCGCCAGTTAAAGATCTTCGCTCACGCCTGCCACGTACACCCATATTTGTGTGCAAGCAATGTAATCAAACCTTCGACGAGCTTGGCAAGCTGCTGCATCACGAATTTGAACAACATTCCAGTGGCATTGTATCGCCCCGCATCAGCTACCAGCATCAGTGCAAGATATGCAATACAACATACCGTACCGTAACACTACTCAACTATCACATGAAGCGGCATACGCCAGTAAAAACCGTATGCAAACACTGCTCCAAAGAGTTTGCAAGCATATCCGATTTGGAACAGCATTTAGCGACAGAGCATAGCAGCGGTGCACAGATGCCACTCAAGTGCGGCATGGATGGTTGCACCAAGACATTTAACTACAAACACCATCTGAAAAGGCATCAGACAGCCTCTCACACGCCCGTGCAGTATATCTGTCCAGAATGCGGACGCGATATGCTCACTAGTCTGCATCTCAGGAATCATATGTCCAGCCACAGGAGTACACACTCTTATAAGTGTCCCAAATGTGTGCGAACGTATATGAGACGCAATCCCTTTCGCAGACATGCACTCCGTGAGCACAAGTGGGAGCTGACCGACCAGGAGATTGATGAAATTCATTGCGTTAATGATTCTCTGCCATCAAGTAAATTGCGCGGACGCAGATCTGTGAAGGCTGATATCGATCAATCCGATTAG
- Protein Sequence
- MAHKRVKTQDMAANYKFSCRCCLKSEAEFYKLDSLIECGNGESDATPTKIPLLRLLLFCMRIENQPELPQYICVECSKSLQIAYYFIKNGLRAHEILCRNLCPGKLKNPGRFNGQQSAQWLESNESEEATQARHWEPKSQKPGVRHECKVCGAIIYNRMELKQHIRMHADASKHQCKLCSFVTFKHRQMPEHYRKVHGLTAAQVEHQLKIRKSMQASANAITAPRKVPIGDDEQVKVCTLEDMELLIPTVLTPEDFSQPQFDADQLRDIEQQLASSLPITQSNSQPADPAIGAANGANVSIGAEFLVMPDGSLQQVNDAGVVFEYIDDSKNTNATSNMTLQSLLDDSKDDLTYSAMDIDLSHMVVDQALPQITVKPKPRPAQASSGALKHKCKLCPKAFPTVARLKSHQLTHSHLPKFYCDQCSYYSLRSADLIQHYTTEHKSCVSESRFNNLDKSQFIVPADRSRIYSCDMCLFEAPTSGQLRVHYSDKHLIVPSDVQLRPSWTHEPKQRNANAMSSSGNSSQPDIPVGIKYPPITSTATAEATSASTAVAQPSLASTTSAGVTPMNDMNVVVDTTSLFYAATAEQLPNTNAATSVTTAATDSNTFAIFPEQSFANSLTTPTETPTTISVDTSSVASTTAVNQPNTSIFGDMQDFIDNTDVAAICTIPADDMPVVDGDDIVIDNNNISLDFDAENLFEDFDDVEVGEEDDDDEDAENEDENENNDAAADQNLLLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVSVARTTIEKINVYVDKDPTLMCAKCPFECEVEGEMRKHLNAHHGINDGGSTHANEVFIIRKLPYDCPRCIRSFAAKRTLTRHLQRSHLVDTIIEMQAPQLSTSSAATTTTSTATTTLPLNASDGNKTTTTTSGASTELDSNVLTQHFADSVDVDGEGDGDGGGNGKCDRDTGCTAENVSTDIHTEAPQQTNDAATTEPTEAAPNANTEATEAEIPTIKPTTEEGPTTTTTTSTAGSTLFPTPTPFDFDLDFMGNGEHAATHKINDNYNIAPNPSHLLNGSDKLLTAALEPSPVKDLRSRLPRTPIFVCKQCNQTFDELGKLLHHEFEQHSSGIVSPRISYQHQCKICNTTYRTVTLLNYHMKRHTPVKTVCKHCSKEFASISDLEQHLATEHSSGAQMPLKCGMDGCTKTFNYKHHLKRHQTASHTPVQYICPECGRDMLTSLHLRNHMSSHRSTHSYKCPKCVRTYMRRNPFRRHALREHKWELTDQEIDEIHCVNDSLPSSKLRGRRSVKADIDQSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512961;
- 90% Identity
- -
- 80% Identity
- -