Basic Information

Gene Symbol
Rel
Assembly
GCA_035046225.1
Location
JAWNOD010000494.1:1845611-1848551[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2e-51 1.2e-47 161.9 0.4 1 168 145 327 145 328 0.95
2 2 0.59 3.2e+03 -2.2 0.1 19 48 459 486 456 495 0.80

Sequence Information

Coding Sequence
atgaatCAACAGCAATTCTTTGACCTGGATCAAGGCAAGAATATATCCTACATGAATGATTGCTCCAGCACGAGTGGATATAGCAGCACGAATTCGCCCACATCGATGACACAGTCGCCGTCGCATTCGCCGACGACGTTTGTTTTACAAAATGAATTCGCCAACCTTAATTTGCCCGCAATGTCGAACTCACCTTCACCacaactacagcaactgcGCGGCTCACCAtaccagcagcagtcgcacACAGCGAATCAGCTGCTCCCAAGTGGCAACCTCTGCATGGAAATTGATGGCGGCACCAACAATATACTAAATGGAAACGCGAATTTCGGCAGCATGTACATGCCCATGGATCACTTCTATGCAACGCCACAAAATGTCGGATTTTCGCCCATCGATGGGGGCGTCAAACATGAATACTCCGCCGTGCTGCACATTGCCGAGCAGCCGGTGGAAAAGTTTCGCTTCCGCTACAAAAGTGAAATGCATGGAACACATGGTTCCCTCAATGGCATCAACTCGAAGAGGACGCCGAAAACATTTCCGGAGGTAATGTTGCGCAACTACAAGGGACCGGCAGTCATCCGTTGCAGCCTGTTCCAAACCAATCTGGACAGCCCCCACTCACATCAGCTGGTGGTGCGCAAGGATGAGCGCGATGTGTGCGATCCACACGATCTCCACGTCTCGCAGGAGCGTGGCTATGTGGCCCAGTTCATCAACATGGGCATCATACACACAgccaaaaaatacatattcgACGAGCtgttgaagaagaaaaaggatCGCCTGGTCTTTCAAATGGGCCGTCGGGAACTGTCTACCAAGCAGGTGCAGGAGTTGCACCTGGAAACAGAGCGTGAGGCCAAGGATATGAATCTGAATCAGGTGCGCCTTTGCTTCGAGGCCTTCAAGATTGAGGACAATCACACCTGGACGCCGATCGCGGCACCCGTCTTTAGTAATCCAATCAACAATCGCAAGTCCGCCCAAACTGGCGAGCTGCGCATCACACGCCTCAGCAAGCCCACGGGCAGTGTCATGGGCAACGATGAGCTGATCCTGCTCGTGGAGAAGGTCAGCAAGAAGAACATCAAAGTGCGCTTCTTTGAGGAGAACGATGATGGTGAAACGGTCTGGGAGGCATATGCCAAGTTCCGTGAATCGGATGTCCATCATCAGTATGCGATTGTCTGCCAGACGCCCGCCTACAAAGACAAGGATGTGGAGCGCGAGGTGGACGTCTCCATTGAGCTGATACGTCCCTCCGACGATGAGCGCTCCTTTCCCCCGTTGCCTTTCCGCTATAAGCCGCGCGACGCGATTGTTTCGCGCAAACGCCGACGCACCTGCTCCACactcaccagcagcagcggcagcagcagtggcagcctGCACAACTCATTGGAGCTGCCCAAGACGGTGCCGCAGCAGGCCGTGGTCAATGTATCGCAGCACGACCAGACGATCAGCCAGGAATTCGGTCGAGAGTTTCATTTGGACCAACTAATAAATCCGGAATCGTTTCGCAAGATACTCGAGCAGGACTCCGCCGAGCTGGAGAAGCTGTGCGTCACCGATATTGGCGTACTAGAAACAGATGGTCAGCAGCAAGCGGAGAGTGCGGATAGCCTTGTCCCCTTGCAGAGCAGCAAGTACAATCGCAATCTGACCAGCACCTACCTGGCTGAAATCTTCAAGATATTCGACGTAGTTCGACGCGCCGGCGATAACCAAGAGCTCTTTCAGTCCTCCTGCAAGAAGGTGGAGTATCTGTTCAACGACCACATGCAGAAGAACGTCAACAATGATACGCTGCTGCACGAGGTGATTAGCCAGCGCAAGGACAACCTGAAGCTGGCAATTAAGACGTTCCAGGTGATTGACTACTTCAAGCTGAAGGAGCTGGCACACACGGCACAAAATGCGGATGGCGACAGTTGCTTGCACGTTGCCTGCCAGCAGGATCGGGAGCATTATATACGCCCCTTGCTGGGCCTGGGCTGTAGCCCCAATCAACAGAATCAAACGGGCAATACGCCCTTGCATTTGGCTGTCAAAGAGGATCGTAACAATTGCATTAAGCTCTTCCTCAACGGACCCGGCGCCAAACTGGATTTGTCGCTGAAGAACGATGACGGCCTGACCCCGCTGCACATGGCCATCAGACAGAATAAGTACGATGTGGCCAAGAGCCTAATCAATTACGACCGCAGCTCCATCAATGTCGCCAACACAACTGACGGCAACAATGCGCTCCACATGGCCGTGCTTGAGCAGAATGTGGAGCTGATCGTCCTAATACTGGACGCAGAGAATCCAATGGATATATTGATGTGTACAAATTCGGCTGGCTTAACACCTCTGCAGCTGGCACGCGCCAAGGCCAATGATCGCTGCGTTCGCTTGCTGGAGGAGGTGTATCCGGATAAAGGAGAGTGCACCATGACCTGGATACCAGTGAATATCAAAGAGGAAATGGACTCCTCGTCTGCCGAGGATGACGAAGAAAGCATTTCCGAAACACCAGCCCAAGCGATCAAAACCGAAGAGGTTGAGATGGTCGTCAAGACGGAGCACAATGATGAGGACAGCGCCAAGGATAAGAGCGACGCCATCGAGCAATTGAAGCAACTGCTGAGCAGCAAGCCCAAGTTCGACAAACTGGTGGCTCAGCTCGACGAGCCGACGGCGCACAATGCCAGCTTGCCCAAATGGAAGGAGATCATAGGGAAAACCGAACTGAAACAGTTCGACTGGCTCTGGTCCAGCTCCGAGGGCATGCTCAACTATATACAGCACAAGTCGAGCGATAATGAGTACAAATACTTTGCACTTGCCCTGCAGGAGCTGGGTATGCTTAATGCTTCCGATTAa
Protein Sequence
MNQQQFFDLDQGKNISYMNDCSSTSGYSSTNSPTSMTQSPSHSPTTFVLQNEFANLNLPAMSNSPSPQLQQLRGSPYQQQSHTANQLLPSGNLCMEIDGGTNNILNGNANFGSMYMPMDHFYATPQNVGFSPIDGGVKHEYSAVLHIAEQPVEKFRFRYKSEMHGTHGSLNGINSKRTPKTFPEVMLRNYKGPAVIRCSLFQTNLDSPHSHQLVVRKDERDVCDPHDLHVSQERGYVAQFINMGIIHTAKKYIFDELLKKKKDRLVFQMGRRELSTKQVQELHLETEREAKDMNLNQVRLCFEAFKIEDNHTWTPIAAPVFSNPINNRKSAQTGELRITRLSKPTGSVMGNDELILLVEKVSKKNIKVRFFEENDDGETVWEAYAKFRESDVHHQYAIVCQTPAYKDKDVEREVDVSIELIRPSDDERSFPPLPFRYKPRDAIVSRKRRRTCSTLTSSSGSSSGSLHNSLELPKTVPQQAVVNVSQHDQTISQEFGREFHLDQLINPESFRKILEQDSAELEKLCVTDIGVLETDGQQQAESADSLVPLQSSKYNRNLTSTYLAEIFKIFDVVRRAGDNQELFQSSCKKVEYLFNDHMQKNVNNDTLLHEVISQRKDNLKLAIKTFQVIDYFKLKELAHTAQNADGDSCLHVACQQDREHYIRPLLGLGCSPNQQNQTGNTPLHLAVKEDRNNCIKLFLNGPGAKLDLSLKNDDGLTPLHMAIRQNKYDVAKSLINYDRSSINVANTTDGNNALHMAVLEQNVELIVLILDAENPMDILMCTNSAGLTPLQLARAKANDRCVRLLEEVYPDKGECTMTWIPVNIKEEMDSSSAEDDEESISETPAQAIKTEEVEMVVKTEHNDEDSAKDKSDAIEQLKQLLSSKPKFDKLVAQLDEPTAHNASLPKWKEIIGKTELKQFDWLWSSSEGMLNYIQHKSSDNEYKYFALALQELGMLNASD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00597925;
90% Identity
iTF_00516026;
80% Identity
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