Basic Information

Gene Symbol
Camta1
Assembly
GCA_008042775.1
Location
VNKC01004078.1:1-24247[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.4e-49 7e-45 151.3 1.7 2 116 99 211 98 211 0.98
2 2 0.69 1.1e+04 -4.0 0.5 79 93 426 440 401 454 0.51

Sequence Information

Coding Sequence
ATGGCTGGCTACAGATCCCTGCCCCTGGCCCCGGTGGCTGCCACGGCAGCGGTGCAGCCCACGATGGGCGTCCAGGTCCAGCCCACGATGGCCGCCTACGCCCACCACCAGTCGATGACGGCCATGTCGAACAACGGTATTATCTATCAGTCGGCGGTGCACGCCTCCATTCACAGCCTCAATACGATCTTCAGCCACCTGCAGAGCGCCCTCATGCCGCTCAGTGTCAATGGCGAACCCATCAAGCTGCCCGACAATTTGGAGAGCCTGCCAAGAGCGGACAGTTTTCCATCACAGCGCCATCGTTGGAATACAAATGAGGAAATCGCAGCGATTCTTATCAGCTTTGATAAGCACGGCGAGTGGCAGTCCAAGGAGGTTCGAACCAGACCCAAGAGCGGATCCCTGTTGCTGTACTCGAGGAAGAAGGTCCGCTACCGACGCGATGGCTACTGCTGGAAGAAGCGCAAGGATGGCAAGACGACGCGCGAGGATCACATGAAACTAAAAGTACAAGGCACGGAGTGCATCTATGGTTGTTATGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTGTTGCAGAATCCCGACATTGTCTTGGTGCACTATCTGAATGTGCCGTATCCGGATGATAATAAAATGGCCGTCATAGCGCCCAGCATCACTCTCTGGGGCGACAAGAAGGAGTGGACCAAGGAGGAGCTGGTCAGCCAGTTGAAGCCCATGcTCTCCACAGTTAATTCAGACGATGACTCAGACTCTGGCAACGATATAGAAATTTCGACGGCGGAGACAGTGGAGTCCATAGTTTGCCAGCTGATGGAGAAGCAGAGATTGTCCCGCCAGGCAGCGCTGGTCAAGCAGCTGGACTGCGGTTGCGGGGATGCAGGATGTGCGGACGGAAAGACCTGCACGCATCCCGTGATGCGGCGGTCCGGCGCCATCCTCAAGTCCTCGGTCCAGGAGAAGCGGCTGGGCGAGGCCTTCAACGGCAACACGCCCAATGTGGTGGTGGCCAGCAAGCTCTACTCCCGCTGGGCGGAGCGACCAAGGCAGCACCTGGACAGCCACGGGCAGTTCCACAATGCCACGCAGCAGTTGCCGCAGGAGTCGGCCATCAAGTTCCAGATCAttccgccgcagcagcagcaacaacaacagcaacagcagcaggcggggCATGGAGATGGAAGCTACCAGCAGTATCGAGGCGCCAGTCAGATGCTGGCCGCAAGAAGCAATCTggtgatgcagcagcagcagcaacagcagcagcagcagcaacaccaacagcagcagcagcaataccatcagcagcagcaacagcaacagcagcagcaactgagCCTGCAGAGATTCGTGGCCAGTCAAAGCCAGAACTCGGTGCATCTTAATCAGCAGCACAGGCTGCAAATTGCCAATACCACAATCACGGCCACTGGCAGGGATCCTGCGACgactggagcagctgcagcagcagcagcggcagctgtagTCGCCTCAAATGTTATGGACACCGAACTAATTGAAACACAAAGCCACATGACCGCAAACAAAATCACAAACTCCGGCagcaataacagcagcagcagcaatgccAGCAAGCAATTAGCAGGCCAAACAAACAACGAATTAAATGTCGTAAATAATAACGACACcggcaacaataataacttCATGTACaatcatcagcagcaactCAATGcttccagcaacagcaacaacagcgcccagcagcagcagcaacagcagcaacagcaacaacattattataaattgcaACAGACAACAGCAACCCCAAGCAGTGGCCAACCCCCGCCCATGGCGCAAGTGCAGCCTCAGCCCCCCGTGGAGGCCATGTGCATGTCACCGGagcaccgcagcagcagcagcatcagcagtagcagcagccaGCCCCCAGCTGCCACGTCTTCCGCTGGCAACCCCGCCAcatccacacccacacccacatcGGGCAGCTCGTCCACTTCGAGTTCCTTACAATCGATTATCGATGgcaatcagcagcaacaaattaCAACGACGTCGACGGCGGTAGCAACTTGTGATAATTTAATGAGCGCCAATGCGCTCTCTGAGCAGGacgtgggcagcagcagcagcagcggccataACCACAGCAACGGGAACAGCAACATTAACAATCAGGCCACAGAAGGCCTCAACAGGAGTCAGTCGCAGACTCAACCCCTGAACCCCAATGGTTGTGCAACTTTCAGAGCTTCCAGTGATAACAGCAGCCAATTAAGCGCCAGcgagaacagcagcagcagcaacagcagcagcagcgaggaggagccCCAGGCCGAGACGCTGAGCTTCTTCAACGAGACGTTGGATCTGTCCCACGAGGACATTCAGCGCACCTTGATAGCCAACATGCCGTTCAACGTTCCGGCACAGGCACCGACCGCAGCTGGACCGCCCTCAGCAACAACGACATCAACAACATGCAACAGCAAAGCAAAGAACAATcagcaggagccggagaagAAACCCTCAGCGGGAACTGAGGCTGAAACGGAGCCAGAGGAGGATGAGACGGACGATGTGTTTGCCAACCTGGACGCCTTCGATATGCTCGTGGAGTTTCCCGAGCTGGATCTGGACGATAAGCAGGCCCTGAACAACACGGCCCTGGAACAGGGATCGTACTTGGGAGACCCAAcgccacagccgcagccccGCAAGGTGCTGAACATATGCGACTTTAGTCCCGAATGGTCGTACACTGAGGGAGGCGTCAAGGTTCTGGTGGCAGGTCCCTGGACGAGTAGCAATAGTGGCGCCTACACGGTGCTTTTCGACGCTCAACCCGTGCCCACGCAGCTGGTGCAAGAGGGCGTCCTTCGTTGCTATTGTCCGGCCCACGAGGCGGGATTCGTGACGCTGCAGGTGGCCTGTGGCGGATTCCTCGTCTCCAACTCGGTGATGTTCGAGTACAAGCTGTCCCTGCTGGCGGACGCTCCCTTCGATGCCAGTAGCTCCAACGACTGCCTGTACAAGTTCACGCTGCTCAATCGCCTGTCCACCATCGACGAGAAGCTGCAGGTGAAGACCGAGCAGGATCTGACCGACCACACCGCTCTCTTTCTGGAGCCCAACTTTGAGGAGAAGCTGGTGGCCTATTGCCACAAGTTGATCAAGCACGCTTGGAGCATGCCCAGCACCGTAGCTTCCTGGACGGTTGGATTGCGTGGCATGACGCTTCTCCATCTGGCCGCCGCTTTAGGCTACGCCAAGCTGGTGGGCGCCATGCTCAACTGGCGGGCAGAGAATCCACATATCATACTTGAAACGGAGCTGGACGCTCTCAGCCAGGACGTCTACGGGTTCACCCCGCTGGCCTGGGCCTGTGTACGCGGCCATGTGGAGTGCTCGCTGCTGCTCTACAAGTGGAATCACAATGCGCTCAAGATCAAGACGCAGGCGCAGCAGACGCCTCTGGACTTGGCCAGCATGCGGGGTCACAAGCACCTGCTGGCGCAAATGTTTCGGCTCGAGAAGGAGCGGTGCCGGAAGCCACAATTGCGCGGCGGCCTGGCCAATCTCTCGATGAACATGGGCGTGGAAGCGGAtgcagaggagcagcagcagcaacagcagggcTTTAGCGGATTTGATTTGGAGCTTCACCGCAAGCATGATGGGGTTTTCCTGAGGCCAGTAGCGGTGCACAGCAATCAAAGTCCACCCAATAGCAGCAGCCGTTACTCCAAGCGCTCTTCCATCGACAGTGGCATTAACATGGATATACGCAGCAAGTCAGGCAAACCATTGGCCAGGCTGCACAGCAACTATGAGAGCCATGACAATTATGCCTTGGGCGTGGACTCACCGCTGGACTCCTTGACTGGAACCAACTGTCTGCTGTCGCCGCTGCGCAAGATGGACTTTGCTTTGTGCGAGGTGGTATCCACGGGCGAATCGAGCCCCGTGAACGACAAAGACATCGATGACAACTCGACGAGCGCGACCGATGTGACCATTGGCAATGACTTGGCCCTGCCCGATGCCGTTGTAGGGGATTCGGATGCAAAAGTGCTGACCTTGGCCGAGCACATAATCGCTGCCATGCCAGAACGCATTAAGAACGAAGCTGACGAAATGATGGTGCTGGGCAGCCCCCTGACAGAACCCCTCACTTCCGAGTCGTCGGCGTTGACAGATAGCTTTATGGACCCACTGCTCGACTCGCTGCCCAATACGCACTTCGACAGTGACTTCAGCTTTGATTTCCATGACCATGGCTATCGCTATCACGATGTCAGCACGCCCTGCTCCAGTCTCAGTCCTGCCAGTTCGGGACCCCTGCAGTCGCCTGCCAGCTACTCCATACTGGGCACAGATCCGTCGGTCAGCTCACCGAGTCCTCCGCCGTCGACGAAGCAACTTACGGAATTCCTGCACGCCTCCAGCATCTCACAATATCCGTTCGAGGCAGACTTCTCGAAGCTAACCCTGACGGATACGGAGCAGCGGGAGCTGTACGAGGCGGCCAAGTGCATACAGAAGGCCTATCGCTCGTACAAGGGCCGGCAGAAGATGGAGGAGCAGAATAAGGAGCGCAGCGCCGCCACCGTAATCCAGAACTATTATAGGCGGTACAAGCAGTACGCCTACTACAGACAGATGACGAACGCCGCCCTGGTTATCCAGCACGGCTATCGCTCCTATCGGCGCAACAAGCGCTTCAAGAAGAGCGGACTGTGCGGCCTGGGCAGTGGCAGTGATCACGGCAGCGTTAGCAGCAACTCGCAGTGTCTGTCCAGTTTCTACGACCATTACAagcaggatcagcagcagcagcacgagaTGGGCTCGCAGCCCAGCACGCCCAAGGAAACGAGTCCATCGGGACCCTTGAA
Protein Sequence
MAGYRSLPLAPVAATAAVQPTMGVQVQPTMAAYAHHQSMTAMSNNGIIYQSAVHASIHSLNTIFSHLQSALMPLSVNGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHGEWQSKEVRTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDDDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDAGCADGKTCTHPVMRRSGAILKSSVQEKRLGEAFNGNTPNVVVASKLYSRWAERPRQHLDSHGQFHNATQQLPQESAIKFQIIPPQQQQQQQQQQQAGHGDGSYQQYRGASQMLAARSNLVMQQQQQQQQQQQHQQQQQQYHQQQQQQQQQQLSLQRFVASQSQNSVHLNQQHRLQIANTTITATGRDPATTGAAAAAAAAAVVASNVMDTELIETQSHMTANKITNSGSNNSSSSNASKQLAGQTNNELNVVNNNDTGNNNNFMYNHQQQLNASSNSNNSAQQQQQQQQQQQHYYKLQQTTATPSSGQPPPMAQVQPQPPVEAMCMSPEHRSSSSISSSSSQPPAATSSAGNPATSTPTPTSGSSSTSSSLQSIIDGNQQQQITTTSTAVATCDNLMSANALSEQDVGSSSSSGHNHSNGNSNINNQATEGLNRSQSQTQPLNPNGCATFRASSDNSSQLSASENSSSSNSSSSEEEPQAETLSFFNETLDLSHEDIQRTLIANMPFNVPAQAPTAAGPPSATTTSTTCNSKAKNNQQEPEKKPSAGTEAETEPEEDETDDVFANLDAFDMLVEFPELDLDDKQALNNTALEQGSYLGDPTPQPQPRKVLNICDFSPEWSYTEGGVKVLVAGPWTSSNSGAYTVLFDAQPVPTQLVQEGVLRCYCPAHEAGFVTLQVACGGFLVSNSVMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQVKTEQDLTDHTALFLEPNFEEKLVAYCHKLIKHAWSMPSTVASWTVGLRGMTLLHLAAALGYAKLVGAMLNWRAENPHIILETELDALSQDVYGFTPLAWACVRGHVECSLLLYKWNHNALKIKTQAQQTPLDLASMRGHKHLLAQMFRLEKERCRKPQLRGGLANLSMNMGVEADAEEQQQQQQGFSGFDLELHRKHDGVFLRPVAVHSNQSPPNSSSRYSKRSSIDSGINMDIRSKSGKPLARLHSNYESHDNYALGVDSPLDSLTGTNCLLSPLRKMDFALCEVVSTGESSPVNDKDIDDNSTSATDVTIGNDLALPDAVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFHDHGYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKMEEQNKERSAATVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSGLCGLGSGSDHGSVSSNSQCLSSFYDHYKQDQQQQHEMGSQPSTPKETSPSGPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00525865;
90% Identity
iTF_00525865;
80% Identity
-