Basic Information

Gene Symbol
Camta1
Assembly
GCA_008042475.1
Location
VNJM01003527.1:1417114-1439838[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.7e-49 8.6e-45 151.2 1.7 2 116 84 196 83 196 0.98
2 2 0.39 7.3e+03 -3.3 0.4 73 103 397 427 348 436 0.57

Sequence Information

Coding Sequence
ATGGCTGGCTACAGATCCCTGCCTCTGGCTCCTGTGGCCGCCACAGCGGCTGTGCAGCCGACGATGGGTGTCCAGGTCCAGCCGACGATGGCTGCCTATGCCCACCACCAGTCGATGACGGCCATGTCGAACAACGGTATTATCTATCATCACCTGCAGAGCGCCCTCATGCCGCTCAGTGTCAATGGCGAACCCATCAAGCTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTTCCATCACAGCGCCATCGTTGGAATACAAATGAGGAAATCGCAGCGATTCTTATCAGCTTTGATAAGCACGGCGAGTGGCAGTCCAAGGAGGTTCGAACAAGACCCAAGAGCGGTTCCCTGTTGCTGTACTCCAGGAAGAAAGTTCGCTACCGACGCGATGGCTACTGCTGGAAGAAACGCAAGGATGGCAAGACAACGCGCGAGGATCACATGAAACTAAAAGTACAAGGCACGGAGTGCATCTATGGTTGTTATGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTGTTGCAGAATCCCGACATTGTTTTGGTGCACTATCTGAATGTGCCGTATCCGGATGATAATAAAATGGCAGTGATAGCGCCCAGCATTACACTTTGGGGCGACAAGAAGGAGTGGACCAAGGAGGAGCTGGTCAGCCAACTGAAGCCCATGCTCTCCACAGTCAACTCTGATGATGACTCAGACTCCGGCAATGATATAGAAATATCGACTGCCGAAACAGTGGAGTCCATAGTTTGTCAGCTAATGGAGAAACAACGATTGTCTCGTCAAGCGGCGCTGGTCAAGCAGCTGGACTGCGGTTGCGGGGATTCAGGATGTGCAGATGGAAAGACCTGCACGCATCCCGTGATGCGGCGTTCCGGCGCCATACTCAAGTCCTCGGTGCAGGAGAAGCGACTGGGCGAAGCCTTCAACGGCAATGGAACGCCGAATGTGGTGGTGGCCAGCAAGCTTTACTCCCGCTGGGCGGAGCGACCAAGGCAGCATATGGACAGTCATGGGCAGTTCCACAATGCCACGCAGCAGTTGCCGCAGGAGTCGGCCATTAAGTTCCAGATCAttccgccgcagcagcagcaacaacagcagcaggcagggcATGGAGATGGTAGCTATCAGCAGTATCGAGGAGCCAGTCAAATGCTGGCCGCAAGAAGCAATCTGgtgatgcagcagcaacaacaacagcagcagcagcaacaacatcaacagcagcagcaataccatcagcagcaacagcaacagcagcagcacctgagCCTGCAGAGATTCGTGGCCAGTCAGAGCCAGAACTCGGTGCATCTCAATCAGCAGCATAGGCTGCAAATAGCCAATACAACAATCACGGCCACAGCCAGAGATCCTGCAACGaatggaggagctgcagcagcagcagcggcggcggcagcggcagctgtgGTCGCCTCAAATGTTATGGACACCGAACTAATTGAAACGCAAAGCCACATGACCGCAAACAAAATCACAAACTCCGGCAgcaataacagcagcaacaacagcagcaatgcCAGCAAGCAATTAGGAGGCCAAACAAACAACGAATTAAATGTCGTAAATAATAACGACACcggcaacaataataacttCATGTACAATCATCAGCAGCAACTCAATGcttccagcaacaacagcgcccagcagcagcaacaacattacTATAAATTGCAACAGACAGGAGCAACCCCAAGCAGTGGTCAACCCACTCAGTctcagccccagccccagccccctGTGGAGGCCATGTGCATGTCACCGGAGCATCGTaacagcaacagtagcagcagcagcagcagtagcaggagTCAGCCCCCCGCTGCCACGTCTTCCGCTGGCAATACCTCCTCCTGTGTGGCCACATCCACACCCACATCGGGCAGCTCATCCACTTCGAGTTCCTTACAATCGATTATCGATGgcaatcagcagcaacaaattacaacgacggcagcagcagcaacttgtGATAATTTAATGAGCGCCAATGCGCTCTCTGAGCAGGACGggggcagcagccacagcaacggcaacagcaacagcaacagcaacatcaacaatcAGGCCACAGAAGTCCTCAACAGGAGTCAGTCGCAGACTCAACCCCTGAACCCCAATGGTTGTGCAACTTTCAGAGCTTCCAGTGATAACAGCAGCCAAATAAGCGCCAGCGAgaacagtagcagcagcagcagcaacagtagcagcagcagtagcgaGGAAGAGCCCCCGGCCGAGACGCTGAGTTTCTTTAATGAGACGCTGGATCTGTCCCACGAGGATATACAGCGCACCTTGATAGCCAATATGCCATACAACGTGCAGGCAGCGGGagtaggagcagcagcaggaggaggagtagttgctgtaacagcaacaacgacagcagcagcaacaggtaaCGGCAAATCCAACAACAATCAACAGGAGCAGCCGGAGATGAAACCCTCCGCCGTAGCCAAGGCTGAAACAGAGCACGAGGAGGATGAAACGGACGATGTGTTTGCCAACCTCGACGCCTTCGATATGCTTGTCGAGTTTCCCGAACTCGATTTGGATGACAAGCAGGCCCTGAACAACACGGCATTGGAGCAGGGTTCCTATTTGGGAGAGCCTGCACCGCAACCCCGCAAGATGCTGAACATATGCGACTTTAGTCCCGAATGGTCGTACACGGAGGGGGGTGTCAAAGTCCTCGTCGCAGGACCCTGGACGAGTAGCAATAGTGGCGCCTACACAGTGCTTTTTGACGCCCAGCCCGTGCCCACGCAACTGGTGCAGGAGGGTGTCCTTCGTTGCTATTGTCCCGCCCATGAGGCAGGGTTTGTGACGCTACAGGTGGCCTGCGGCGGTTTCCTCGTCTCCAACTCGGTCATGTTCGAGTACAAGCTGTCCCTGCTGGCAGATGCACCGTTCGATGCCAGCAGCTCCAATGACTGCCTGTACAAGTTTACGCTGCTCAATCGGCTGTCCACCATCGACGAGAAGCTGCAGGTGAAGACCGAGCAGGAGCTGACCGCTGACCATACCGCTCTCTATCTGGAGCCCAACTTTGAGGAGAAGCTGGTGGCGTATTGCCACAAGTTGATCAAGCACGCCTGGAGCATGCCCAGCACGGTGGCTTCCTGGACGGTTGGTTTGCGTGGCATGACGCTGCTGCATCTGGCTGCCGCCTTGGGCTATGCCAAGCTAGTGGGCGCCATGCTCAATTGGCGGGCAGAGAATCCACATATCATACTCGAAACGGAGCTGGACGCTCTTAGCCAGGATGTCTATGGCTTTACCCCGCTGGCGTGGGCCTGTGTACGCGGTCATGTGGAGTGCTCACTGCTACTGTACAAGTGGAATCACAATGCTCTAAAGATCAAGACACAGGCACAGCAAACGCCTCTGGATTTGGCCAGCATGCGGGGTCACAAGCATTTGTTGGCGCAAATGTTTCGGCTGGAGAAGGAGCGCTGCCGGAAGCCACAGTTGCGCGGTGGCCTGGCCAATCTCTCCATGAATATGGGCGTAGAGTCAGAGgcagaggagcagcaacagcagcagagctTTAACGGCTTTGATTTGGAGCTGCAGCGCAAGCATGATGGGGTGTTCCTGAGACCAGTAGCTGTGCACAGCAATCAAAGTCCCCCCAACAGTAGCAGCCGTTACTCCAAGCGCTCTTCTATAGACAGTGGCATTAATATGGATATACGCAGCAAATCAGGCAAACCCTTGGCCAGGCTGCACAGcaacTATGAAAGCCATGACAACTATGCCCTGGGCGTGGACTCACCGCTGGACTCGCTGACTGGCACCAACTGTCTGCTGTCGCCTCTACGCAAAATGGACTTTGCTTTGTGCGAGGTGGTATCCACGGGTGAATCGAGCCCCGTTAACGACAAAGACATCGATGACAACTCGACGAGCGCCACCGATGTCACCATTGGCAATGACTTGGCCCTGCCCGATGCCGTTGTAGGGGATTCGGATGCCAAAGTGCTGACCCTGGCCGAGCACATAATCGCTGCCATGCCAGAACGTATTAAGaaCGAAGCCGACGAAATTATGGTACTGGGCAGTCCCCTGACAGAACCTCTGACTTCCGAGTCATCGGCGTTGACGGATAGCTTTATGGACCCCCTGCTCGATTCGCTGCCCAATACCCACTTTGACAGTGATTTTAGCTTTGATTTCCATGACCATGGCTATCGCTATCATGATGTCAGCACGCCCTGTTCCAGTCTCAGTCCGGCCAGTTCGGGACCGCTGCAATCGCCCGCCAGTTACTCCATACTGGGCACAGATCCGTCGGTCAGCTCACCGAGTCCGCCGCCGTCTACGAAACAATTAACGGAATTCCTGCACGCCTCCAGCATATCGCAGTATCCTTTTGAGGCGGACTTCTCAAAGCTCACGCTAACGGATACGGAGCAGCGGGAGCTGTACGAGGCCGCCAAGTGCATACAGAAGGCCTATCGCTCGTACAAGGGCCGGCAGAAGATGGAGGAGCAGAATAAGGAACGCACTGCTGCCACTGTTATCCAGAACTATTATAGGCGGTACAAGCAGTATGCATACTACAGGCAAATGACAAACGCCGCCCTGGTTATCCAGCACGGCTATCGGTCGTACCGGCGCAACAAGCGGTTCAAGAAGAGCGGTCTAGGCGGCCTGGGTAGTGGCAGTGATCATGGCAGCGTCAGCAGTAACTCGCAGTGTCTGTCCAGTTTCTATGATCATTACAagcaggatcagcagcagctacaggaGATGGGCTCGCAGCCGAGCACGCCCAAGGAAACGAGTCCATCGGGTCCTTTGAAGCGTACCTACTCACAGTCCACCCAGAATCAAGCTGCCAGGAAAATCCAACAGTTTATGAGACAATCACGAATCAAACTACAGAAAGAGCGAGCCGAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTTTCAAGGGCAGCAGGAAATGTTGGTGTGCCACGAAAATAGCAATTCAGGAGCGAGTAGTGGCAACACCGGTGCaagcaacatcaacaatcTACACCAAATACAATCCAATCAGTGA
Protein Sequence
MAGYRSLPLAPVAATAAVQPTMGVQVQPTMAAYAHHQSMTAMSNNGIIYHHLQSALMPLSVNGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHGEWQSKEVRTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDDDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDSGCADGKTCTHPVMRRSGAILKSSVQEKRLGEAFNGNGTPNVVVASKLYSRWAERPRQHMDSHGQFHNATQQLPQESAIKFQIIPPQQQQQQQQAGHGDGSYQQYRGASQMLAARSNLVMQQQQQQQQQQQHQQQQQYHQQQQQQQQHLSLQRFVASQSQNSVHLNQQHRLQIANTTITATARDPATNGGAAAAAAAAAAAAVVASNVMDTELIETQSHMTANKITNSGSNNSSNNSSNASKQLGGQTNNELNVVNNNDTGNNNNFMYNHQQQLNASSNNSAQQQQQHYYKLQQTGATPSSGQPTQSQPQPQPPVEAMCMSPEHRNSNSSSSSSSSRSQPPAATSSAGNTSSCVATSTPTSGSSSTSSSLQSIIDGNQQQQITTTAAAATCDNLMSANALSEQDGGSSHSNGNSNSNSNINNQATEVLNRSQSQTQPLNPNGCATFRASSDNSSQISASENSSSSSSNSSSSSSEEEPPAETLSFFNETLDLSHEDIQRTLIANMPYNVQAAGVGAAAGGGVVAVTATTTAAATGNGKSNNNQQEQPEMKPSAVAKAETEHEEDETDDVFANLDAFDMLVEFPELDLDDKQALNNTALEQGSYLGEPAPQPRKMLNICDFSPEWSYTEGGVKVLVAGPWTSSNSGAYTVLFDAQPVPTQLVQEGVLRCYCPAHEAGFVTLQVACGGFLVSNSVMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQVKTEQELTADHTALYLEPNFEEKLVAYCHKLIKHAWSMPSTVASWTVGLRGMTLLHLAAALGYAKLVGAMLNWRAENPHIILETELDALSQDVYGFTPLAWACVRGHVECSLLLYKWNHNALKIKTQAQQTPLDLASMRGHKHLLAQMFRLEKERCRKPQLRGGLANLSMNMGVESEAEEQQQQQSFNGFDLELQRKHDGVFLRPVAVHSNQSPPNSSSRYSKRSSIDSGINMDIRSKSGKPLARLHSNYESHDNYALGVDSPLDSLTGTNCLLSPLRKMDFALCEVVSTGESSPVNDKDIDDNSTSATDVTIGNDLALPDAVVGDSDAKVLTLAEHIIAAMPERIKNEADEIMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFHDHGYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKMEEQNKERTAATVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSGLGGLGSGSDHGSVSSNSQCLSSFYDHYKQDQQQLQEMGSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQKERAEKEKLVHQRRAEYLQNLQFQGQQEMLVCHENSNSGASSGNTGASNINNLHQIQSNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00571882;
90% Identity
iTF_00571882;
80% Identity
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