Dpec001013.1
Basic Information
- Insect
- Drosophila pectinifera
- Gene Symbol
- Bro
- Assembly
- GCA_008042775.1
- Location
- VNKC01000954.1:95877-96527[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-76 3.7e-72 241.2 2.0 1 155 39 189 39 199 0.94
Sequence Information
- Coding Sequence
- ATGCATCATCACCAGAATCTTGGAGAAGCGGCCGCCGCACTGTCGGGTATAATCCCGCCTCCCTACGAAGCCATGGCCATGTACGAGCAGCCTAAGCCGCGTTTCATCTTCAAGATGCCCCGCGTGGTGCCCGACCAGAAGTCTAAGTTCGACAGCGACGAGCTCTTTCGCCGACTCAGCCGGGAAAGCGAGGTTCGGTATACGGGTTACCGGGAACGGGCTGCCGAGGAACGTCGGATGAGGTTTGTCAACGACTGCCGCAAGGGCTATGCTGAGATGTCCTTTGTTGCATCCGGCACCAACCTCCAGCTGTACTTCAACGCCAACCACAATCCGTAcgcccaggagcaggagtgcGACTTCGAGCGGGAGCGTGGCAAAGTCCATCTGCGGTCCAACTTTATCATGAACGGCGTATGCGTCCGTTTCCGGGGCTGGGTGGATCTGAATCGGCTGGACGGCGTGGGCAGTCTGGAGTTCGACGAGCCACGAGCCCAGCAGGAAGATGCCCAGCTTCAGGAGCAGATCCAAAGCTACAATCAGAGGATGGTAGAGTCCAAGAGGACTTACCACACACCTCAAACGCCACCAGAGGATCATCCCCATCGTAGGGGAGGTCCTGGGATGCCAGGAGGTCCCATGGGCTGGTAG
- Protein Sequence
- MHHHQNLGEAAAALSGIIPPPYEAMAMYEQPKPRFIFKMPRVVPDQKSKFDSDELFRRLSRESEVRYTGYRERAAEERRMRFVNDCRKGYAEMSFVASGTNLQLYFNANHNPYAQEQECDFERERGKVHLRSNFIMNGVCVRFRGWVDLNRLDGVGSLEFDEPRAQQEDAQLQEQIQSYNQRMVESKRTYHTPQTPPEDHPHRRGGPGMPGGPMGW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00532869;
- 90% Identity
- iTF_00491985;
- 80% Identity
- -