Basic Information

Insect: Drosophila paulistorum
Gene Symbol: -
Assembly: GCA_018152135.1
Location: JAECXG010000823.1:2785131-2832374[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.88 68 4.3 3.9 3 23 314 336 312 336 0.91

2 14 5.9 4.6e+02 1.7 2.1 3 23 520 541 518 541 0.89

3 14 3 2.4e+02 2.6 4.1 1 23 558 581 558 581 0.95

4 14 0.021 1.6 9.4 0.5 1 21 586 606 586 610 0.91

5 14 0.75 59 4.5 0.9 3 23 654 675 652 675 0.88

6 14 0.33 26 5.6 2.9 1 21 680 700 680 701 0.95

7 14 0.15 11 6.8 0.7 2 23 720 741 719 741 0.94

8 14 0.00018 0.014 15.9 3.4 2 23 754 774 753 774 0.97

9 14 4e-05 0.0031 18.0 2.9 1 23 780 803 780 803 0.97

10 14 5.3e-07 4.1e-05 23.9 0.4 1 23 827 849 827 849 0.98

11 14 3.9 3e+02 2.3 3.3 1 23 857 881 857 881 0.92

12 14 0.18 14 6.5 2.6 1 23 886 910 886 910 0.97

13 14 0.0052 0.4 11.3 2.4 1 23 918 940 918 940 0.97

14 14 0.001 0.078 13.6 4.7 1 21 946 966 946 971 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.88	68	4.3	3.9	3	23	314	336	312	336	0.91
2	14	5.9	4.6e+02	1.7	2.1	3	23	520	541	518	541	0.89
3	14	3	2.4e+02	2.6	4.1	1	23	558	581	558	581	0.95
4	14	0.021	1.6	9.4	0.5	1	21	586	606	586	610	0.91
5	14	0.75	59	4.5	0.9	3	23	654	675	652	675	0.88
6	14	0.33	26	5.6	2.9	1	21	680	700	680	701	0.95
7	14	0.15	11	6.8	0.7	2	23	720	741	719	741	0.94
8	14	0.00018	0.014	15.9	3.4	2	23	754	774	753	774	0.97
9	14	4e-05	0.0031	18.0	2.9	1	23	780	803	780	803	0.97
10	14	5.3e-07	4.1e-05	23.9	0.4	1	23	827	849	827	849	0.98
11	14	3.9	3e+02	2.3	3.3	1	23	857	881	857	881	0.92
12	14	0.18	14	6.5	2.6	1	23	886	910	886	910	0.97
13	14	0.0052	0.4	11.3	2.4	1	23	918	940	918	940	0.97
14	14	0.001	0.078	13.6	4.7	1	21	946	966	946	971	0.93

Sequence Information

Coding Sequence: ATGATATATATGACAGAGGATAATACTATTTCAAGTGATTCATTTAAGTATTTGATCGTTTTTAAATTGCCATTGAAGACCTATAACAAGATAATTATGAATTCGGCCGATTTAGACGACACTCATCTGTGTATAAAGTGTAATGGAAAAATTTTAGGACTTTCGAAATACATTGATCACCGTAAACGTAACTGTTCGCCTATGGAAAAGCCAAACGCATCAAGTACTACTACGCATGGTACAATGACAAGAACGTCGCCACCAATAGTTAGTCGCAACAACTTAGACCACACATACGATAGTTTTCATTTCGTTGAGCCAGAGCCACCCAGCAATTTTTTACAAAAAGCTGCTGAAAGTCACGGCGGAAAATCATCTAAATCATTGACAGAGGCTTATGATCTTCCATACGAGTTAGGCGCTGATGTATTCTTTTCATCTCTGCAATTGCAAAGCGTCTCAACTGGTTGTAAGACTGTACCAGGAGGACGGGCCGAGATTGGAAGATCCAAAGACGAAGACTGGAATGCTCCCCGGGTAGATCCTCTTCTCAAAGCATTAAGGGAACATGACGATGTGGTATTTAAACCTCTTAAGTTTCAACATGATTCCCCAGAGCTAAGTGATGATGAAGAAGAAGAAGACGATCCCGATGAATTTGGTGAGGAGGTTGTTGAAGATTATGATATAAGACGCCATTCGCCACCTATAGTGCCAGCTACACATACTGGAGGCAAGTGGAAGCCAGAACATAGGCCCCAACTGCGGCATCCGCACATGGAACGCATTTCACCTAATTGGGATGAGCCTGGAGAAGAAACGTATGCTCATCCACCGGCGGAATATACTAAGGGGAAGTGGATACCTGGTAGCAAGCATTTGGAATATCGCGAAAATCATAATCTCACTAAGTGTGAACAATTTGAGGACTGCTTTTGGTGTAACATATGTTGTCGTAAATTGAAAACTCGTTCAAATTACGAGCAGCATTTAAAAAGTAGCTTCCACTTAAAAAGGGCAGAAACAGAGTGCCAACTAGGCCAGGCAAGTCTTGGAACTGAGCTGACATTAAGTAAACAGTTTTCTATCGAGCTTCAACGTTCAAATAAAGATAGAAGTCAATTAAGACAGCGTCGGTCCAGTCGCATCCGGTGTAATCTTTGCCGTTACAACGTGCCACGTCAGTGGATTGGCAAGCATCTTATATCACACTATCACTATCGACGACTTCAACAGCAATCTCCGGGGCTGCGACAAAGCTCGCTTCAAGATATCCTTAATCACATGAGCAGCATTGTAAAACAATCGCCGTTCCAGTGCATGCCTTGCCGCTTCTATGCCAACACAGAAGCAACTTTTCTAAGTCATTGGCAATCAGAAAACCACCTGGAACTTACGATAAGGCTTGGAGGAAGTTTCTGGTGTGATTACTGTCAGTTTGAGTGTAATTCGAATGAAGCCATGTTTGACCATTTTTTGCAATCAACACACAAGAGCGTCATTTCATCTCTTAATCGCTCTGTTCCGGTTTACATAGCTCAAAGAAGACATATTTACTGCTCGTGTTGCGGTATGCGCTTTCTGTATAATATACAATTGCGTAGGCATTTTTCATCCGAACATCCTGGAGTCACGCCCACCGAAAGTGCTGCTGATGATTATCAGTGCCGTTTTCGCTGTCAATTCTGTGGATCATTTCATCGTTCTCGAGTGGCTCTGCAGCGGCACGAGAAGTACAAACATCAATTTATAAGATATTACTGCACAATTTGTCGATTAGAATTCGAATCTCCAAAGGATGCCCGCCGACACCGCAGTCTTATGCAACACAGGATGAAAACTAAACCAAATAAGTCCATTTCCCAGCCAGAGCAATATACCGAACAGACGATTTCTAAAATTTTGGAAGACAGATCTCCAAGGCCTTCTGCCGACAAGCGGTGCATTTTTCAAAAACAGTGCATTAATTGCTCACAAATTTTTGAGTCGCCGCAACTTCTTTGTCAACATCTGACTCAGGCTCATCCGTCTGAAAATCATCAATGCCTTAGTTGCGGATGCCATTTCCAAACTGCTCAGGCCTTAGGACGGCACACTCGAAACTGTAAACCAACACCAACAACCTCTAAACAGGCACTGCATAAAATAAACTTGTGGCCTTGTGACAAGTGCAGTTTTAGTTCACAGTATAAATCGGACTTGCTCTATCATCAGCTTTTCCATACTCAGGGAGAGACCATTGACAAAAATGAGCTTCTTCAATGTCCACTATGCAGTAAAAAATTTCGTAAACATTCCCTAAGAGCCCATTTACGTAATCACACGGATGAGAAGATATTTCAATGCCCCGAGTGTTTGCAAAAGTTTGCTCGGCGTCATAATCTCAAAAATCACTTAACTAGAATGCATGGGCAAAACCACCAAAATAAACAAAAATATGAAGCTAAAATCAAAGAGTTAAAAAAAAATCAAAAGAAATATGAATGTGAAACCTGTGGAAAGATATTTGCAAAAAAATCCTCCCTAAAAGCTCACGAAATGACTCACAACGCCAGCATCGAACGGAATTTTCATTGCCATTTTAAAGACTGTGCGTATTCAGGTTTAACCCAGGAAAATCTTAAAACCCACTTAATTTCACACTCCCAAGGAAGTTACAAATGCACTAAGGAAAAATGCATCTACGTAGGAAAGAGTGCCATGCATTTAAGAAGGCACCTCAAGTCACATAATATAGAGAATACTCATTGGTTTTCTTGCAATCAATGCGACTTTAAAGCTCGACTCAAGGGGCATCTTACCAGACATATACTACAGCACTCTGGAGCCAAACCGCACAAATGCCCATACTGTGATTTTCATTGCAGTACAATAGATAACCTGCGCAAGCACATTATTAAGACAGGCAAGCATCCCGGAAGATTTATTTATGAGTGCGACAAATGTTTAGCTGATCAAAGCAATGCAATTTTCAAAAGCAACAGTTTTAAGGAATATCAAACACATTTGACCATCCATTTATCCAAATGA
Protein Sequence: MIYMTEDNTISSDSFKYLIVFKLPLKTYNKIIMNSADLDDTHLCIKCNGKILGLSKYIDHRKRNCSPMEKPNASSTTTHGTMTRTSPPIVSRNNLDHTYDSFHFVEPEPPSNFLQKAAESHGGKSSKSLTEAYDLPYELGADVFFSSLQLQSVSTGCKTVPGGRAEIGRSKDEDWNAPRVDPLLKALREHDDVVFKPLKFQHDSPELSDDEEEEDDPDEFGEEVVEDYDIRRHSPPIVPATHTGGKWKPEHRPQLRHPHMERISPNWDEPGEETYAHPPAEYTKGKWIPGSKHLEYRENHNLTKCEQFEDCFWCNICCRKLKTRSNYEQHLKSSFHLKRAETECQLGQASLGTELTLSKQFSIELQRSNKDRSQLRQRRSSRIRCNLCRYNVPRQWIGKHLISHYHYRRLQQQSPGLRQSSLQDILNHMSSIVKQSPFQCMPCRFYANTEATFLSHWQSENHLELTIRLGGSFWCDYCQFECNSNEAMFDHFLQSTHKSVISSLNRSVPVYIAQRRHIYCSCCGMRFLYNIQLRRHFSSEHPGVTPTESAADDYQCRFRCQFCGSFHRSRVALQRHEKYKHQFIRYYCTICRLEFESPKDARRHRSLMQHRMKTKPNKSISQPEQYTEQTISKILEDRSPRPSADKRCIFQKQCINCSQIFESPQLLCQHLTQAHPSENHQCLSCGCHFQTAQALGRHTRNCKPTPTTSKQALHKINLWPCDKCSFSSQYKSDLLYHQLFHTQGETIDKNELLQCPLCSKKFRKHSLRAHLRNHTDEKIFQCPECLQKFARRHNLKNHLTRMHGQNHQNKQKYEAKIKELKKNQKKYECETCGKIFAKKSSLKAHEMTHNASIERNFHCHFKDCAYSGLTQENLKTHLISHSQGSYKCTKEKCIYVGKSAMHLRRHLKSHNIENTHWFSCNQCDFKARLKGHLTRHILQHSGAKPHKCPYCDFHCSTIDNLRKHIIKTGKHPGRFIYECDKCLADQSNAIFKSNSFKEYQTHLTIHLSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00612455;
90% Identity: -
80% Identity: -