Dpau001426.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila paulistorum
Gene Symbol
RREB1
Assembly
GCA_018152135.1
Location
JAECXG010000821.1:26002932-26009360[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.033 2.6 8.8 0.8 1 21 245 265 245 267 0.93
2 13 0.00031 0.024 15.2 0.2 1 23 277 299 277 299 0.98
3 13 0.51 39 5.1 0.6 1 13 305 317 305 320 0.91
4 13 2.1 1.6e+02 3.1 0.4 2 23 430 452 429 452 0.91
5 13 2.2 1.7e+02 3.1 6.2 2 19 458 475 458 477 0.97
6 13 0.038 2.9 8.6 0.0 1 23 648 670 648 670 0.97
7 13 1.1e-05 0.00088 19.7 0.7 1 23 680 702 680 702 0.99
8 13 0.00077 0.059 13.9 2.0 1 23 708 731 708 731 0.97
9 13 0.0027 0.21 12.2 2.0 1 23 1008 1031 1008 1031 0.95
10 13 8e-05 0.0062 17.0 0.3 2 23 1423 1444 1422 1444 0.97
11 13 0.13 10 6.9 6.3 1 23 1450 1473 1450 1473 0.97
12 13 0.0078 0.6 10.8 0.5 3 23 1700 1720 1698 1720 0.96
13 13 0.0012 0.096 13.3 4.8 1 23 1726 1748 1726 1748 0.99

Sequence Information

Coding Sequence
ATGCTAGCAACAACAACAACAACATCCACTGATATGGAACGTCAACGTAGAGATTCCACAACCTCAGAATCCTCATTGGAACATCTTGATCTTGGCCGCACACCAAAGAAATTAAGCAGCGCCAGCGGAACGCTGCACCCAACCTCAACGCCACACACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTTACTCTCACTCTCCGAGGATGAAGAAGAAGCCGAGGAGGAGTCTGCACCAACAATTGCTAATGCTGCAGCCGCGCAGCAGCAACAGCAACGCCCACGCCATAAACAGCGACGCAACGGCTCTGTTGCCGCCGCTGCTAGCGCCAGCATTGTAATCGATGGCCCAGCCGATGCCAATTCACTTCGCAAGAAATTTCGCTTGAACCACAGCAATAGCAGCAGTCTAATCAATGGTGAACTATCCGAATCGGGTTTCGTCGATGGCAGCGCACACAGTGGCTATCTAATTGGCAATAGTCATGCCTCTGCCGTTATTAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGGCTCCTCTTCGCCTCAAGGCCTTTGCATGTCATCGTCCAGTGCTGGCGGCGATGAGCACATGAAATATCTATGCCCCATCTGTGAGGTTGTCTCGGCCACGCCCCATGAGTTTACCAATCACATCCGATGTCATAATTATGCCAATGGCGATACCGAAAATTTCACCTGTCGCATTTGCTCCAAGGTACTATCCTCAGCCTCATCTTTGGATAGGCATGTTCTGGTACATACAGGTGAACGACCCTTTAATTGTCGCTACTGCCACCTGACATTTACCACAAATGAGCGCATCAAGGAAGAGCAAATGGATGTGGAGGATGAGCAAGTAGATGGAGAAGCAGCTGTCGTAATGGACGAATTGCCGATATTAAAACAAAAACGTCGCCTAAAGACGACAATTAATAATAATAATATAATAAACGATGATCACGATGATGACGATGCAGCGGCAGGACGTGATGAACTGGATGCCGATGGAGAGGTGGATAATGATGAGGATGAAGATGATATTGGTGGCGATCGGCAAACAGAAGTGGAAGTATCTATCACTAGTACACCAGATGTTGCCGCTCTATTGGCTGGCGCCTCGAGATCAGCATCACCCACAACTCCATTGATAAGTTGTCCCGTCTGTTTATCTGAATTCGAATCCCTGCCCACTTTATGCCAACATTTGGATCAACAGCATTCCGATATATTGGCCAAATGTCGTGAGTGTGAGGTCATCTTTTCGAGTCACAAGCAACTGCAGAAACATTGCTGTCGCGGTGGTTCTTCGTCCAGTGGTTTGCCCCCTCTCCTAAGAGCGAGCAGCTCACCATTGCATGGCGAGCAAGAGGATGACGACGATGTCGACCGTGATGACGATGATCGAGAGATGAGACGTGCTGGCGTGGACCCAGACCATCGCGATGAAGTCAAGGTGGAAAAGGAAGCCGAAGCCGAGGCCAAACAGCGTGACGATTTCTTTCATCATTTGTATTTGAAGAGCAAAACCGAACATGCCCATATGTCCGAGGACAACAATGAGTTGGCCACTTCGCCACCATCGCCCATAAAACATGAGCCGAATGATAGCAAAGACTTGGCCGATATACAAAGTATCCTGAACATGACCAGTTCGAGTTGTACATCTAGTTTTCTGCGCAACTTTGAGCAATCGGTCAATACGCCATGCTCGTCGAGTCAATACAGTCTGGATGGTCGGGATCAGGAGGAGGAGGCCCAAGATGTCTTCACCTCGGAATTCCGTCGCATGAAATTGCGTGGCGAATTCCCCTGCAAACTGTGTGCGGCAGTTTTCCCCAATTTGCGTGCCCTCAAGGGGCACAATCGTGTGCATTTGGGTGCAGTTGGACCCGCTGGTCCCTTCCGTTGCAACATGTGTCCCTATGCCGTGTGCGACAAGGCCGCCTTGGTGCGGCACATGCGCACCCATAATGGGGATCGTCCGTATGAGTGTGCCGTCTGCAATTATGCCTTCACTACCAAGGCGAATTGTGAGCGCCATTTGAGGAATCGTCATGGCAAAACCAGTCGTGAGGATGTCAAACGTGCCATTGTCTACCATCCGGCCGAGGATGCCAGTTGTGGTGAGGGTGAGGGTAAATTGCGTTTAAATGACACCGATGAGAGTTATCGTTCGGCATCGCCGCCACCGCTGGAGGGGACCGCTGCCTCCCAATTGAAGCATATGCTGATGAACGATGGCCCAGGAGTGACGCAAAGCGTGCAACCGCCACCACTTAAGATCCAGGTAAAGAGCCTGGATCAGTTGGTAGAGAAGCAAACACCCGCCATTAAGGCGACACCATCGCCAGCAGCAAGTGCTATTGATCTCTCAATGGATGTGCTAGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTTCAACAATCCTCTGGATTTCCCTTCTTTAACTTCATGACACCACCAGCTCCGCCGCCACCGTCAACATCGTCGACTGGATCAGCCGTTGGAGAGAAATTGCCACCGTCAAGTGCCATGCAGCAGCAGCAGCAACAACAAATGAGCCCCTCGAGCAATCGTCTATCCCTTTTGCCCGGTGGACCAGTCAAAATGGTCATCAAGAATGGAGTCCTAATGCCCAAGCAGAAGCAACGTCGCTATCGCACCGAACGTCCCTTTGCCTGTGAGCATTGCTCGGCAAGATTTACCTTGCGTTCGAATATGGAGCGACATGTGAAGCAGCAACATCCACAATTCTATGCCCAGCGCCAGCGAAGTGGCCATCATGTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTTGGTCACACCCATTTCGGAGCAGGTGAAATATGCCATATTGGCCCAACAATTGAAGGCACACAAGAACACGGATTTGCTGCAACAGGCATTGGCCCATGGATCGAGCAGTGTGGCAGCAGCAGCGGCAGCTTCTTCTCACTTGATTAACTTCAATTATGCCTTGGCCAATGGAAATGGGAATGTCAATGGCAACAGTAATGGAAATGCTCATGGAAATGGTCATAGTTTGGCCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCAGCAGCAGCTCACGATGTGGATATGGATAAAAAGCTGGTGGTAATTGTGGATGATGAGCAGCAATCGCATGGCAAAGATTTGCCACAAACCATTGAGAACATGGCCAGTAATGAGGCAGCCAAAAAGGTGGCCGAAACCATTTTAGAGCAGGCCATCAAAGCTGGCAAACCCATAAGCCATGAAGTGGAACCAACTTCCACTACAGTTGCCAGTAGCCATCAGGCGCCATCCTCAATGAAGTCGATGATTGCTCAAGTTGAATCCGTGGCCAAGTCGCTGAAAGATGTGGCCAGTTCACCATTCAATAAAGATGAATCTCCACTCTCCGATTTGGTGCCGGTATCCAAGCTAGTGGACAATGCCACAAGCAATCAATCGATGCAAAGTTTCACCAGTTATTTTCGTCCCAGCGATGTGGCCAATCACATGGAGCAGAGCGACGAGGAGGGTCTCGTTGCCTCAGGCAGTGCCAGTGAGAGTAATAACTCCGGCACCGAAGATGTCACCAGCAGCAGTAGCAGTGGGCAAGAGCCCAAGAAGAAATCCGCCTACAGTCTGGCCCCCAATCGTGTATCGTGTCCCTATTGCCAGCGTATGTTCCCCTGGAGCAGTTCCCTAAGGCGGCACATTTTGACCCACACCGGGCAGAAGCCATTCAAATGCTCTCACTGCCCATTGCTCTTTACCACCAAAAGCAATTGTGATCGTCATTTGTTGAGGAAGCATGGCAATGTCGAATCGGCCATGTCCGTGTATGTGCCCACCGAGGATGTCAGTGAACCGATACCAGTGCCCAAATCAGTGGAAGAAATTGAATTGGAGGAACAACGCAAGCGTCAAGAGGCCGACCGCGAGAAGGCCGAATTGGAACGAGAACGCGAGCGAGAGCGTGAACTTGAGCGTGAGCGGGAACGTGAAAGGCAATTGGAGCGAGAGAGGAAAAAGGAGCTAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTAACGAGTTGGCCAATGGCGATTTGCCCTTCAAGTGCCATCTGTGTGAGTGTTCGTTTAGCGAGCGTTTACAGTGCTTGGATCACATCAAGCAAGCGCATGCCCATGAATTTGCCTTGCTTTTGGCCAAGGGAGCTATCGAAACGGAAGAACCCACCCAGGGAGCAAATGCAACAGCGACGGCGACAGTGCAGCCAACAGCTCCCCAATCCGATGATGAAGGATCTTTGGGTATGGCCGGCAATGGTCGTGGTGGTTCTGGTAAATATCCCGATTATAGCAATCGCAAAGTGATTTGCGCTTTTTGTGTTCGTCGCTTCTGGTCCACTGAGGATTTGCGTCGTCATATGCGTACCCATTCAGGCGAGAGGCCATTTCAGTGTGAGATTTGCCTGCGTAAATTCACATTGAAGCATAGCATGTTGCGCCACATGAAGAAGCATAGTGGACGTTCCCATAATGCTGGTGAGATGCAAGGTGGTTCCGATTGTTCGGATGATGAGCAAATTATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGGGACTACGCCTACCAAAATTGCATGAGCTACTGGACAAGGCGAACGAGTGGCGAGCCAGTCGGTTGGGCGAGCACAAAGAGAATTTGGGCGAGCAACAACACCGTGCAACAACACCGGGAGCAACTCCATCTGCTGTGGCTGGTTCAACCGATCTCATTGGCAATCTATTGGGCATCAGCGATCAGGGTATATTGAATAAATTGCTCTCGTCCGCCGATGAGGCAGCCAAATTTCTGGGAGTGGACAAGTAA
Protein Sequence
MLATTTTTSTDMERQRRDSTTSESSLEHLDLGRTPKKLSSASGTLHPTSTPHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLSLSEDEEEAEEESAPTIANAAAAQQQQQRPRHKQRRNGSVAAAASASIVIDGPADANSLRKKFRLNHSNSSSLINGELSESGFVDGSAHSGYLIGNSHASAVISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSSSPQGLCMSSSSAGGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNERIKEEQMDVEDEQVDGEAAVVMDELPILKQKRRLKTTINNNNIINDDHDDDDAAAGRDELDADGEVDNDEDEDDIGGDRQTEVEVSITSTPDVAALLAGASRSASPTTPLISCPVCLSEFESLPTLCQHLDQQHSDILAKCRECEVIFSSHKQLQKHCCRGGSSSSGLPPLLRASSSPLHGEQEDDDDVDRDDDDREMRRAGVDPDHRDEVKVEKEAEAEAKQRDDFFHHLYLKSKTEHAHMSEDNNELATSPPSPIKHEPNDSKDLADIQSILNMTSSSCTSSFLRNFEQSVNTPCSSSQYSLDGRDQEEEAQDVFTSEFRRMKLRGEFPCKLCAAVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREDVKRAIVYHPAEDASCGEGEGKLRLNDTDESYRSASPPPLEGTAASQLKHMLMNDGPGVTQSVQPPPLKIQVKSLDQLVEKQTPAIKATPSPAASAIDLSMDVLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQQSSGFPFFNFMTPPAPPPPSTSSTGSAVGEKLPPSSAMQQQQQQQMSPSSNRLSLLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLVTPISEQVKYAILAQQLKAHKNTDLLQQALAHGSSSVAAAAAASSHLINFNYALANGNGNVNGNSNGNAHGNGHSLAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAHDVDMDKKLVVIVDDEQQSHGKDLPQTIENMASNEAAKKVAETILEQAIKAGKPISHEVEPTSTTVASSHQAPSSMKSMIAQVESVAKSLKDVASSPFNKDESPLSDLVPVSKLVDNATSNQSMQSFTSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSGQEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRKRQEADREKAELERERERERELERERERERQLERERKKELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNELANGDLPFKCHLCECSFSERLQCLDHIKQAHAHEFALLLAKGAIETEEPTQGANATATATVQPTAPQSDDEGSLGMAGNGRGGSGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSGRSHNAGEMQGGSDCSDDEQIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLRLPKLHELLDKANEWRASRLGEHKENLGEQQHRATTPGATPSAVAGSTDLIGNLLGISDQGILNKLLSSADEAAKFLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00618667;
90% Identity
-
80% Identity
-