Dpau011385.1
Basic Information
- Insect
- Drosophila paulistorum
- Gene Symbol
- dmd-4
- Assembly
- GCA_018152135.1
- Location
- JAECXG010000805.1:10966413-10971024[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-26 4e-22 77.9 8.8 1 47 41 87 41 87 0.98 2 2 0.86 4.1e+03 -2.2 0.2 23 31 316 324 310 327 0.78
Sequence Information
- Coding Sequence
- ATGGCCAGTGTTCGTGTTGATATTGGTGGCAATGACGAGGGTGAAGTGACCGTGAAACGACCACGTGTAAGTGCAAAATCTCTGAAACTAGTTGATCCGCAGCAGCCCAAAGCTTCAAATCGTGTACCCAAATGTGCCCGATGCAGAAATCATGGAATAATTTCAGAGCTCAGAGGACATAAAAAACTGTGCACCTACAAGAATTGCAAATGTCCGAAATGTGTTTTAATCTTTGAACGCCAACGCATAATGGCCGCACAGGTGGCCCTAAAGCGTCAGCAGGCTGTCGAGGATGCAATTGCCTTGCGTCTGGTCGCCAATAAAACGGGGCGCAAATTCGATGCCTTGCCGCCGGGTAATATCTTTGGCCTCACAGTGACTCAGCCCAAAGAGCTGGAGAATAAGATAGTATCTGACGAGGATGCCGATGATGATGGCAATAATAATGCTACAAAAGAAGAGCAACCGTCTAAAGATGCGGAACAACAAGGAAAAGTAGTAGATCCACCAGCAGTGGCCGAAGATTTAAGTGCTACGCGTCGGGAGAATGTATCCCAGACGGCCATCGATATGCTGGCTCAGTTATTTCCTCAACGTAAGCGATCTGTTCTGGAATTGGTGTTGAAACGTTGCGATCTAGATTTGATACGTGCCATTGAGAACGTTTCACCCACGGCTCAGGGATCTAGTGCTTCATTGCAAATACCCGAACCACCACCAATTCAGGCTCTGCAATTGGTTCAGCCCTCGAGGAGTAGCGCCTTTAGACCAGTAATTGCTGAACAGTATCCAAGCAAAACGACCATGATGGAGCTGAAACCAACAGCATCCACATCGACCTCATCATCTTCGATTTTGGGTAGCAGTTCGCTTTGTGCCTATCCCAAGTGGTTTGTGCCTCTATCCTTTCCCGTCACCATGGGCCATCTATCGAATCTGGCACCACGTTGCACTTTGCCCAATTGTCCCTGTTTGGATAGCTATCAATTCCATTAA
- Protein Sequence
- MASVRVDIGGNDEGEVTVKRPRVSAKSLKLVDPQQPKASNRVPKCARCRNHGIISELRGHKKLCTYKNCKCPKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVANKTGRKFDALPPGNIFGLTVTQPKELENKIVSDEDADDDGNNNATKEEQPSKDAEQQGKVVDPPAVAEDLSATRRENVSQTAIDMLAQLFPQRKRSVLELVLKRCDLDLIRAIENVSPTAQGSSASLQIPEPPPIQALQLVQPSRSSAFRPVIAEQYPSKTTMMELKPTASTSTSSSSILGSSSLCAYPKWFVPLSFPVTMGHLSNLAPRCTLPNCPCLDSYQFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00503289;
- 90% Identity
- iTF_00503289;
- 80% Identity
- -