Dpau015805.1
Basic Information
- Insect
- Drosophila paulistorum
- Gene Symbol
- ttk_1
- Assembly
- GCA_018152135.1
- Location
- JAECXG010000606.1:7631765-7636215[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-19 8.5e-16 57.5 0.0 2 45 499 543 498 543 0.97
Sequence Information
- Coding Sequence
- ATGTCTGTCCAGCAATTCTGCCTACGATGGAACAATCATCAGCCGAACTTTATATCGGTCTGTTCATCGCTCCTACACAATGGCACATTGGTGGACGTGACCCTGGCTGCCGAGGGTCGTCAGTTGCAAGCCCATAAAATAGTGCTTTCCGCCTGCAGTTCTTACTTTCAGGCTTTGTTCACCGCAAACCCTTGCCAGCATCCGATTGTCATACTTAAGGATGTGCAGTACGATGATCTCAAGACAATGGTTGATTTCATGTACTATGGTGAAGTAAATGTATCCCAGGAGCAGCTGCCGCACATTCTGAAAACGGCCGAAATGTTAAAGATTAAGGGTCTGGCCGAAATGCCAACGGATCCGGCCACTCTCACCAAATCAGACAGTAAATCGTCTAGCGATGGCACTGAACTTGTTGGCCCAAATGTGGCTGGCTCTGGTGCTGGAGCTGCTGCCGGTAGTTTAGGTGCCGGGAGCACCTCGCCGGCTACGCGGCGCAAAAGATTGCGCAAATCCTCGAATAACGGGTCGGGCGAGCGCACTAACTCGGATGACCATCAACAGCAGCAACACAACAGCTCTCTGGATGCCACCGCTGCTGGTGCTGCGGCTGGCCTAAGTTTGGCACAAATGAGCCAAATGCCATTTGGAACGGGTGGTAATACGGCAGCGACCATTGGCAACCTGGCTGGCCACTCCCTGCATGCGGCCAAGCTGCTTAAGGAGTCGGCCAGCAGTGAGCTGGAGCCGCAGCCTCAGGACTCGGACTTGGATGATGGCCATGGACATATCCATATGCAAATTAAGCCCGAAGTGGATATCGGCGGAGTAAATCAGTCAATGCCCCTGGATATTTCTGGCGCCACCACACCATCCGAGCACGATGCACCGAATTCGCAATCATCGCATTCTGGTCTGCAATGGACAGTTGTCGACTCAAACTATTCGCGCTTTTCCCTGCCCGCCTGCCAGACCAACTTGATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGGCTCTGGTCAGGCGTACTCGTCGCAGATAATAACCGTGAATAATCTAGTCAGCGGTTATACGACAGCCGCCCAAAATCTGTCGCCCACATCGCCCAACGAATCCAATATGGTGCAATCGGTTTATAGCCAAGGTCCCACGCCCACCCAATCGCCGGTGCATTCTGGCGTTGGTGGACCAAGTGCTGCAGGCAATAACGGCGCGGCCAGCGGCGGCGGTGGCGGGAACGGAGGTGCTGCTGGCCAAGTGGTCAAACGGAAGCGTTCAGTGAATCCCCAAGGCGATGAAAATTTTATTCGCGCCTTGGAGGCGGTGCGGACTGGAGGCATAGGTTTCTGCAAAGCAGCCCGCCTTTATGGAGTGAACAATCGTACGCTTTGGTTGGAGTACAAGAAACGGGGTTATCCTGTGTCTAGGCCTAGCATTAAAGCCCGTGTGGTTAAGCAGGAGCCCAATCTGTCGCCATCGCCAACACCGTCAACGAACCCCGGCGATGACAATACTAATGAGACGCTCAATATGCAAATGCCGCCCCAGCCTGAAACGCCAACGCCCTCGCTTATGTGTACGCCGCATCATGCCAGTTTGGCCAGCAGTGGGGGCTCTCTACCTGGCAGTGGCGGTGGCGGCAATACCCATCCGGCCATTGGCGTGATGAGTCTATTCGATGCTCGCTACATGGACTCACCGGGCAGTGTGCATACAATGACGCGGCAACGTTATATCGATGCGAGCGGAGCTGGTGCCGGGACCGCTGGCACGGGTGCGGGCACCATAAATGTGAATCCGGCCGCTGCAATGAATCTACAGAGTATTAACTTTAACTCAATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTANPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPATLTKSDSKSSSDGTELVGPNVAGSGAGAAAGSLGAGSTSPATRRKRLRKSSNNGSGERTNSDDHQQQQHNSSLDATAAGAAAGLSLAQMSQMPFGTGGNTAATIGNLAGHSLHAAKLLKESASSELEPQPQDSDLDDGHGHIHMQIKPEVDIGGVNQSMPLDISGATTPSEHDAPNSQSSHSGLQWTVVDSNYSRFSLPACQTNLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSGQAYSSQIITVNNLVSGYTTAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVGGPSAAGNNGAASGGGGGNGGAAGQVVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDNTNETLNMQMPPQPETPTPSLMCTPHHASLASSGGSLPGSGGGGNTHPAIGVMSLFDARYMDSPGSVHTMTRQRYIDASGAGAGTAGTGAGTINVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00555003;
- 90% Identity
- iTF_00577855;
- 80% Identity
- iTF_00571231;