Basic Information

Insect: Drosophila nebulosa
Gene Symbol: ttk_1
Assembly: GCA_018150735.1
Location: JAECWO010000001.1:5992299-5996917[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.3e-19 9.8e-16 57.2 0.0 2 45 613 657 612 657 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.3e-19	9.8e-16	57.2	0.0	2	45	613	657	612	657	0.97

Sequence Information

Coding Sequence: ATGTCTGTCCAGCAGTTCTGTTTACGATGGAACAATCATCAGCCGAACTTTATATCGGTCTGTTCATCGCTCCTTCACAATGGCACATTGGTGGATGTGACCCTGGCTGCCGAGGGTCGGCAATTGCAGGCCCATAAAATAGTGCTATCCGCCTGCAGTTCATACTTTCAGGCCCTGTTTACCGCAAATCCTTGCCAGCATCCGATTGTCATACTTAAGGATGTTCAGTACGATGATCTAAAAACAATGGTTGACTTCATGTACTATGGTGAAGTGAATGTATCCCAGGAGCAGCTGCCGCATATTCTGAAAACAGCTGAGATGCTAAAGATAAAGGGTCTAGCTGAAATGCCTACTGATCCGGCCACACTCACCAAATCTGACAGTAAGTCATCTAGCGATGGCACCGAACTTGTTGGTCCCAATGTAGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCGGCAACGCGGCGCAAGAGATTGCGCAAATCCTCGAATAACGGCTCTGGCGAGCGCACTAACTCGGATGAGCATCAACAGCAGCAACACAATAGCTCTCTGGATGCCACCGCTGCAGGTGCTGCAGCTGGCCTTAGTTTGGCCCAGATGAGCCAAATGCCATTTGGAGCTGGAGGCAATACAGCTGCAACCATTGGCAGTCTGGCTGGCCACTCCCTGCATGCGGCCAAGCTGCTTAAGGAGTCGGCTAGCAGCGAACTAGAGCCTCAGCCACAGGACTCGGATCTGGATGATGGACATGGACATATCCATATGCAAATTAAGCCCGAAGTGGATATCGGCGGAGTGAATCAATCAATGCCCTTGGATATTTCTGGCGCCACCACACCATCAGAGCACGATGCACCCAATTCGCAATCATCGCATTCTGGTCTGCAATGGACAGTTGTCGACTCAAACTATCCGCGCTTTTCTCTGCCCACCTGCCAGTCCAACTTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGCCTCTGGTCAGGCGTACTCGTCGCAGATAATAACCGTGAATAATCTAGTCGGCGGTTATGCGACAGCCGCTCAAAATCTGTCGCCGACATCGCCCAACGAATCCAATATGGTGCAATCGGTTTATAGCCAAGGTCCAACGCCCACCCAATCGCCGGTGCACTCTGGCGTTGGTGGAGCAAGTGCTGGAGGCAATAATGGAGCTGCCAGTGGCGGCGGCGCCGGCGGGAATGGAGGTGCTGCTGGCCAAGTGGTTAAGCGAAAGCGTTCAGTGAATCCACAAGGCGATGAGAATTTTATACGCGCTTTGGAGGCGGTGCGAACTGGAGGCATTGGCTTCTGCAAGGCGGCTCGCCTTTATGGAGTGAACAATCGCACGCTTTGGCTGGAGTACAAAAAGCGCGGTTATCCCGTGTCCAGGCCCAGCATTAAAGCCCGTGTTGTTAAGCAGGAGCCGAATTTGTCGCCATCGCCGACACCATCAACTAATCCCGGCGATGACAATACCAACGAGACGCTCAATATGCAAATGCCGCCCCAGGCCGAAACGCCGACTCCCTCGCTTATGTGCACGCCGCATCATGCCAGTTTGGCCAGCAGTGCGGGATCTCTACCTGGCAGTGGCGGCGGGGGCAATACTCATCCGGCAATTGGCGTGATGAGCCTCTTCGACGCCCGCTACATGGATTCACCGGGCAGTGTGCATACAATGACGCGGCAGCGTTATATCGATGCGAGTGGAGCTGGATCCGGTGCCGCTGGCACGGGTGCGGGCACCATCAACGTGAATCCGGCCGCTGCAATGAATCTACAGAGTATTAACTTTAATTCAATATAG
Protein Sequence: MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTANPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPATLTKSDSKSSSDGTELVGPNVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATRRKRLRKSSNNGSGERTNSDEHQQQQHNSSLDATAAGAAAGLSLAQMSQMPFGAGGNTAATIGSLAGHSLHAAKLLKESASSELEPQPQDSDLDDGHGHIHMQIKPEVDIGGVNQSMPLDISGATTPSEHDAPNSQSSHSGLQWTVVDSNYPRFSLPTCQSNLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASGQAYSSQIITVNNLVGGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHSGVGGASAGGNNGAASGGGAGGNGGAAGQVVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDNTNETLNMQMPPQAETPTPSLMCTPHHASLASSAGSLPGSGGGGNTHPAIGVMSLFDARYMDSPGSVHTMTRQRYIDASGAGSGAAGTGAGTINVNPAAAMNLQSINFNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00555160; iTF_00618484; iTF_00618319; iTF_00611992; iTF_00612147; iTF_00571231; iTF_00571059;
90% Identity: iTF_00555160; iTF_00618484; iTF_00618319; iTF_00611992; iTF_00612147;
80% Identity: iTF_00555160;