Dpau014712.1
Basic Information
- Insect
- Drosophila paulistorum
- Gene Symbol
- -
- Assembly
- GCA_018152135.1
- Location
- JAECXG010000606.1:7622060-7623706[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.6e-14 1.3e-10 40.9 0.0 3 45 360 402 358 402 0.93 2 3 0.021 51 3.8 0.0 28 38 432 442 430 446 0.88 3 3 7.7e-19 1.8e-15 56.4 0.0 2 42 468 508 467 511 0.93
Sequence Information
- Coding Sequence
- ATGAATAATCTAAAATGGATGGGCCATTCGGCCACAATAATGGACATTCAGCGTTCTTTACAAAACGACGACGAATCGTGTGAAGTTATCCTGGCAACCAAAGATGGCGCAAGTGTGCGCGCCCATCTCTTCATTCTCAGTACATGCAGCGATCTGATGCGGAATCTATTGATGGACTTACCACCAGGCCAGGAGACAACAATCATTCTGCCCGACATTCGTGGCGACCTGCTAGAGAGTATGCTATCATTTATCTACGTCGGTGAGACAAGTCTGCCCTCGGCGTCGTTGACTGAATTCGTAGAGGCAATAAATTTATTGGGCATTAAATCGGCCATTAGTTTTGAGTGTAATCCCACATCGCTGAACAGTACAAATGTGGACACAGTTGCCGAAGGCTCAATGGCAGTTCAGACGGCAAAATCAATTGGCGACTTGCAAATCGAGCATGCCGAATTACTCGATGAGGAGGATGAGTCTGGGCACCAAGAACATGGCTCTGGCGACACTGGTGCAAACACGCTTCTCGCCGATGTTCAAGGCCAACAGCAACCATCTGCTCAGAGTACCCGGTCACTCGAATATCTCGATGTTTACGGCGATCAGCCAAAGATTACCTATTCCATTGAGCACATGAGCGGCACTTCCAGCGGCAATCAATATATTCTAACAGAAAACACGGGCACTTTCACCATATCCCAATCAGCTGTGTCCATTTCGAAATTGGATCCGTCCAATGTTGATATGGCCGATGATGATGCGGAAACTGATTGCAAAGATGAAGTTGAGGATCAGGAAACGCAATTAATTGAAGAGGAATATGCCCCATCTGATCCGTTAATAGGGCTCGCTTTGGGAACTGATGCGGAAATGGGCGAAGCTGATGGTGAGGATGATGACGAAGCCGAAGATGACGATGGCGATGGCGACGTTGAAGATGTATTGGAAATGGAAGTGAAGCCGCAACCGCCCAAATCAAAACCTCGTCGTGTTACTGCCCCGAAAGCAAAACGACCCACAGCCAAGCCACCAATTAAATACACTGACCTTAAGAACGAGGGTAAAGATGGTATCACTGATGGTCTTGAACTCGCCGCTGATGCTGTACTCCGTCTCGGACTTAGTTTACAGAAAGCCGCCGATCGTTATGACATATCGAAAACTGTTCTTTGGCGCCGCGTTCGCCATAGTCCCGAATATATGCGCAGTAATCGTGAGAAGCCCTCATTGGCAGAGGCATACGAACGTCTCAAGAACGGCGACTCGCTGAAGAATATTAGCCATGATCTAAGCATACCGATGTCGACATTACACCGTCATAAAATGCGTCTGGCAGCCCAGGGTCGCTTGCCTGACTTTGTGGCCTGTCGTCGTCGCGATACCACACCCAAAGATGAGCTACGCGACAAGCTGGCCAAGGCCCTACATGCCTGTACCCATGAGGGTATGTCCCAGAATCATGCGGCGAATCTATTCGAGATACCCAAAAGCACGCTTTGGCGTCACCTGCAACGACATACAGCTGAAAAGGAGCGCAAAGTTAAAATGGAGCAGAACGATGATGAGGATGATGAAGATCTTTTAACCTAG
- Protein Sequence
- MNNLKWMGHSATIMDIQRSLQNDDESCEVILATKDGASVRAHLFILSTCSDLMRNLLMDLPPGQETTIILPDIRGDLLESMLSFIYVGETSLPSASLTEFVEAINLLGIKSAISFECNPTSLNSTNVDTVAEGSMAVQTAKSIGDLQIEHAELLDEEDESGHQEHGSGDTGANTLLADVQGQQQPSAQSTRSLEYLDVYGDQPKITYSIEHMSGTSSGNQYILTENTGTFTISQSAVSISKLDPSNVDMADDDAETDCKDEVEDQETQLIEEEYAPSDPLIGLALGTDAEMGEADGEDDDEAEDDDGDGDVEDVLEMEVKPQPPKSKPRRVTAPKAKRPTAKPPIKYTDLKNEGKDGITDGLELAADAVLRLGLSLQKAADRYDISKTVLWRRVRHSPEYMRSNREKPSLAEAYERLKNGDSLKNISHDLSIPMSTLHRHKMRLAAQGRLPDFVACRRRDTTPKDELRDKLAKALHACTHEGMSQNHAANLFEIPKSTLWRHLQRHTAEKERKVKMEQNDDEDDEDLLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00555765;
- 90% Identity
- iTF_00618522;
- 80% Identity
- iTF_00571272;